Miyakogusa Predicted Gene
- Lj3g3v3338570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3338570.1 tr|G7JG42|G7JG42_MEDTR SWI/SNF complex subunit
SMARCC1 OS=Medicago truncatula GN=MTR_4g069830 PE=4
S,72.8,0,ZF_ZZ_2,Zinc finger, ZZ-type; SWIRM,SWIRM domain; SANT,SANT
domain; ZZ,Zinc finger, ZZ-type; Myb_DNA,CUFF.45662.1
(878 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g069830.1 | SWI/SNF complex subunit SWI3D | HC | chr4:2625... 1147 0.0
Medtr4g069830.2 | SWI/SNF complex subunit SWI3D | HC | chr4:2625... 1138 0.0
Medtr3g088480.1 | SWI/SNF complex protein | HC | chr3:40113660-4... 157 5e-38
Medtr3g099000.2 | SWI/SNF complex protein | HC | chr3:45370551-4... 102 2e-21
Medtr3g099000.1 | SWI/SNF complex protein | HC | chr3:45370551-4... 102 2e-21
Medtr3g116120.1 | SWI/SNF complex subunit SWI3B-like protein | H... 87 6e-17
Medtr5g085170.1 | SWI/SNF complex subunit SWI3B-like protein | H... 83 9e-16
Medtr2g026310.1 | transcriptional adapter ADA2a | HC | chr2:9494... 69 2e-11
Medtr2g026380.1 | transcriptional adapter ADA2 | HC | chr2:95216... 66 1e-10
Medtr3g082790.2 | transcriptional adapter ADA2a | HC | chr3:3737... 65 3e-10
Medtr3g082790.3 | transcriptional adapter ADA2a | HC | chr3:3737... 65 3e-10
Medtr3g082790.1 | transcriptional adapter ADA2a | HC | chr3:3737... 65 3e-10
Medtr7g063290.1 | transcriptional adapter ADA2a | HC | chr7:2304... 62 3e-09
Medtr3g081360.1 | transcriptional adapter ADA2a | HC | chr3:3684... 59 1e-08
Medtr3g081380.1 | transcriptional adapter ADA2 | HC | chr3:36860... 57 1e-07
Medtr6g053260.1 | F-box and associated interaction domain protei... 54 5e-07
>Medtr4g069830.1 | SWI/SNF complex subunit SWI3D | HC |
chr4:26258593-26267090 | 20130731
Length = 1041
Score = 1147 bits (2968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/886 (66%), Positives = 672/886 (75%), Gaps = 12/886 (1%)
Query: 1 MLPSFFNGKSENRTPDIYMGVRNWIMKKFHSNPNVQIESKDLSDLDVGELDARQEIMEFL 60
M+PSFFNG SENRTPD YM +RNWIMKKFHSNPN+QIE KDLS+LD+G+ DARQEIMEFL
Sbjct: 160 MMPSFFNGISENRTPDKYMEIRNWIMKKFHSNPNIQIELKDLSELDIGDSDARQEIMEFL 219
Query: 61 DYWGLINFHPFPSTGSAVPTSSDDGESEKNSLLEKLYHFETLQLSPPIVQKTSLMTPAMT 120
DYWGLINFHPFPST SAV ++ DDGE+EKNSLLEKLYHFETLQ PP VQKT L+TPAMT
Sbjct: 220 DYWGLINFHPFPSTDSAVASTGDDGEAEKNSLLEKLYHFETLQSCPPAVQKTGLITPAMT 279
Query: 121 SGLFPESTISEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNGRF 180
SGLFPE I+EELVKQEGPAVEMLEYHCNSCS DCSRKRYHCQKQADFDLCTDCF+N +F
Sbjct: 280 SGLFPEPAIAEELVKQEGPAVEMLEYHCNSCSGDCSRKRYHCQKQADFDLCTDCFNNRKF 339
Query: 181 GSGMSSSDFIVMEPAEVAGVSGGNWTDQXXXXXXXXXXXYKENWNEIAEHVGTKSKAQCI 240
G+GMS DFI+MEPAE AGVS G WTDQ YKENW EIAEHVGTKSKAQCI
Sbjct: 340 GTGMSPLDFILMEPAEAAGVSSGKWTDQETLLLLEALELYKENWTEIAEHVGTKSKAQCI 399
Query: 241 LHFVQMPIEXXXXXXXXXXXXRCKETADPAAT-----VDASVDKGASEAVENDTSHSSKG 295
LHFVQMPIE KETADPAAT +D K ASE +END S S KG
Sbjct: 400 LHFVQMPIEDAFVDCDDDVDAGSKETADPAATNNNLPMDEDKAKDASEVIENDISDSIKG 459
Query: 296 HDESPDTEDVKV--NQEETPKLQDATDVKTSEGTSKSEDAVNVKFGQKVGNDRALNALKE 353
HDE+ EDVKV NQEETPKLQD +D KTSEGT K ED VK G++VG+D LNALKE
Sbjct: 460 HDETSQAEDVKVKDNQEETPKLQDGSDEKTSEGTPKLEDDNKVKLGEEVGDDCVLNALKE 519
Query: 354 AFEAVGYSSEPVGPSSLAEVGNPVMALAAFLAQLVGSDVAVASAHSSIKSMSGNSPGTEL 413
AF AVGYS EP GPSS AEVGNPVMALAAFLAQLVGSD+AVASAH+ IKS+SGN+P TE+
Sbjct: 520 AFAAVGYSPEPEGPSSFAEVGNPVMALAAFLAQLVGSDLAVASAHNYIKSLSGNAPSTEI 579
Query: 414 AARCCFILEDPPDHKEPTC-SERDSESKGVQDDTNDKQDKLMSDDKALANDHKDMEIEIN 472
A+RCCF+LEDPPD K+ T SERDS+S+G Q D N +QD M +DK L DH+ +I +
Sbjct: 580 ASRCCFVLEDPPDDKKDTATSERDSKSEGDQTDKNVQQDAAMLNDKDLEKDHQKTKIASD 639
Query: 473 ASEDQRQLSSTDDGALKDPSSSKEQAMIDHESELDNCNDPTNSKTPNDKVPGTLQDSDGS 532
ASED+ +STD G + P SS+ +AM +HES LDNCNDP+ SK PND+ GTL +S GS
Sbjct: 640 ASEDKIHQASTDGGISEKPISSEGEAMNNHESGLDNCNDPSISKAPNDQAQGTLHNSSGS 699
Query: 533 TSKSEIPPNSEEVREGTLTEEPCHLVEELKDGXXXXXXXXXXXXXXXXIKSNLPGEHSKP 592
T+K+EIPP+SEEV+E T EEP H +EE K+G IKSNLP E KP
Sbjct: 700 TTKAEIPPSSEEVQERTSNEEPGHPIEEQKEGSVSDSHPSEKNEIQQSIKSNLPVELPKP 759
Query: 593 VDTPKSAEMVSDSISLDKNQPQTPLSTNPVLESGKMKDSEMDVDIGSNSLPSEKIDSQPP 652
+TPKS +MVSDS+ D N+PQ LSTN V ES K DS MDVD+ SNSLPS KIDSQP
Sbjct: 760 AETPKSDDMVSDSMPSDTNKPQKQLSTNAVSESQKTTDSAMDVDVVSNSLPS-KIDSQP- 817
Query: 653 FTPISSQYNGAEKDVDMISSSHPIKSNSGAENDATTGTGEDHVENATKVKDDGAKTNLDN 712
SSQ N KDVDM+ SSHPIKS+ GAEN A G ED N +VK+DG+KT D+
Sbjct: 818 --LTSSQDNETHKDVDMMPSSHPIKSSVGAENGAIAGAVEDCAGNGMEVKNDGSKTKQDS 875
Query: 713 NFEKXXXXXXXXXXXXXXXXXXXXDQEEDEIRQLTSSLIEKQLHKLETKLAFFNGMENVV 772
+FEK +QEED+IR+LTS+LIEKQLHKLETKLAFFN ME++V
Sbjct: 876 SFEKVKRAAVSTLAAAAVKAKVLANQEEDQIRELTSALIEKQLHKLETKLAFFNDMEHLV 935
Query: 773 MRVREHLDRSRHKLYHERALIIASRLGLPASSSRGVPPSVQTNRIPMNFANSLPRPQIAM 832
MRV+E LDRSRHKLYHERA+II+SRLG+PASSSRGVPPS+ TNRIPMNFANSL RPQ M
Sbjct: 936 MRVKELLDRSRHKLYHERAMIISSRLGVPASSSRGVPPSIPTNRIPMNFANSLQRPQFNM 995
Query: 833 NPQRQMISRPVGTAASTLPNPFASANPAGNSVRPSSQENLSSVGTK 878
NPQ +ISRP TAA+TLPNP SA AG+SVRPSSQENLSSVGT+
Sbjct: 996 NPQGPLISRPGSTAATTLPNPLMSATAAGSSVRPSSQENLSSVGTE 1041
>Medtr4g069830.2 | SWI/SNF complex subunit SWI3D | HC |
chr4:26258609-26267090 | 20130731
Length = 1039
Score = 1138 bits (2944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/886 (66%), Positives = 671/886 (75%), Gaps = 14/886 (1%)
Query: 1 MLPSFFNGKSENRTPDIYMGVRNWIMKKFHSNPNVQIESKDLSDLDVGELDARQEIMEFL 60
M+PSFFNG SENRTPD YM +RNWIMKKFHSNPN+QIE KDLS+LD+G+ DARQEIMEFL
Sbjct: 160 MMPSFFNGISENRTPDKYMEIRNWIMKKFHSNPNIQIELKDLSELDIGDSDARQEIMEFL 219
Query: 61 DYWGLINFHPFPSTGSAVPTSSDDGESEKNSLLEKLYHFETLQLSPPIVQKTSLMTPAMT 120
DYWGLINFHPFPST SAV ++ DDGE+EKNSLLEKLYHFETLQ PP VQKT L+TPAMT
Sbjct: 220 DYWGLINFHPFPSTDSAVASTGDDGEAEKNSLLEKLYHFETLQSCPPAVQKTGLITPAMT 279
Query: 121 SGLFPESTISEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNGRF 180
SGLFPE I+EELVKQEGPAVEMLEYHCNSCS DCSRKRYHCQKQADFDLCTDCF+N +F
Sbjct: 280 SGLFPEPAIAEELVKQEGPAVEMLEYHCNSCSGDCSRKRYHCQKQADFDLCTDCFNNRKF 339
Query: 181 GSGMSSSDFIVMEPAEVAGVSGGNWTDQXXXXXXXXXXXYKENWNEIAEHVGTKSKAQCI 240
G+GMS DFI+MEPAE AGVS G WTDQ YKENW EIAEHVGTKSKAQCI
Sbjct: 340 GTGMSPLDFILMEPAEAAGVSSGKWTDQETLLLLEALELYKENWTEIAEHVGTKSKAQCI 399
Query: 241 LHFVQMPIEXXXXXXXXXXXXRCKETADPAAT-----VDASVDKGASEAVENDTSHSSKG 295
LHFVQMPIE KETADPAAT +D K ASE +END S S KG
Sbjct: 400 LHFVQMPIEDAFVDCDDDVDAGSKETADPAATNNNLPMDEDKAKDASEVIENDISDSIKG 459
Query: 296 HDESPDTEDVKV--NQEETPKLQDATDVKTSEGTSKSEDAVNVKFGQKVGNDRALNALKE 353
HDE+ EDVKV NQEETPKLQD +D KTSEGT K ED VK G++VG+D LNALKE
Sbjct: 460 HDETSQAEDVKVKDNQEETPKLQDGSDEKTSEGTPKLEDDNKVKLGEEVGDDCVLNALKE 519
Query: 354 AFEAVGYSSEPVGPSSLAEVGNPVMALAAFLAQLVGSDVAVASAHSSIKSMSGNSPGTEL 413
AF AVGYS EP GPSS AEVGNPVMALAAFLAQLVGSD+AVASAH+ IKS+SGN+P TE+
Sbjct: 520 AFAAVGYSPEPEGPSSFAEVGNPVMALAAFLAQLVGSDLAVASAHNYIKSLSGNAPSTEI 579
Query: 414 AARCCFILEDPPDHKEPTC-SERDSESKGVQDDTNDKQDKLMSDDKALANDHKDMEIEIN 472
A+RCCF+LEDPPD K+ T SERDS+S+G Q D N +QD M +DK L DH+ +I +
Sbjct: 580 ASRCCFVLEDPPDDKKDTATSERDSKSEGDQTDKNVQQDAAMLNDKDLEKDHQKTKIASD 639
Query: 473 ASEDQRQLSSTDDGALKDPSSSKEQAMIDHESELDNCNDPTNSKTPNDKVPGTLQDSDGS 532
ASED+ +STD G + P SS+ +AM +HES LDNCNDP+ SK PND+ GTL +S GS
Sbjct: 640 ASEDKIHQASTDGGISEKPISSEGEAMNNHESGLDNCNDPSISKAPNDQAQGTLHNSSGS 699
Query: 533 TSKSEIPPNSEEVREGTLTEEPCHLVEELKDGXXXXXXXXXXXXXXXXIKSNLPGEHSKP 592
T+K+EIPP+SEEV+E T EEP H +EE K+G IKSNLP E KP
Sbjct: 700 TTKAEIPPSSEEVQERTSNEEPGHPIEEQKEGSVSDSHPSEKNEIQQSIKSNLPVELPKP 759
Query: 593 VDTPKSAEMVSDSISLDKNQPQTPLSTNPVLESGKMKDSEMDVDIGSNSLPSEKIDSQPP 652
+TPKS +MVSDS+ D N+PQ LSTN V ES K DS MDVD+ SNSLPS KIDSQP
Sbjct: 760 AETPKSDDMVSDSMPSDTNKPQKQLSTNAVSESQKTTDSAMDVDVVSNSLPS-KIDSQP- 817
Query: 653 FTPISSQYNGAEKDVDMISSSHPIKSNSGAENDATTGTGEDHVENATKVKDDGAKTNLDN 712
SSQ N KDVDM+ SSHPIKS+ GAEN A ED N +VK+DG+KT D+
Sbjct: 818 --LTSSQDNETHKDVDMMPSSHPIKSSVGAENGAI--AVEDCAGNGMEVKNDGSKTKQDS 873
Query: 713 NFEKXXXXXXXXXXXXXXXXXXXXDQEEDEIRQLTSSLIEKQLHKLETKLAFFNGMENVV 772
+FEK +QEED+IR+LTS+LIEKQLHKLETKLAFFN ME++V
Sbjct: 874 SFEKVKRAAVSTLAAAAVKAKVLANQEEDQIRELTSALIEKQLHKLETKLAFFNDMEHLV 933
Query: 773 MRVREHLDRSRHKLYHERALIIASRLGLPASSSRGVPPSVQTNRIPMNFANSLPRPQIAM 832
MRV+E LDRSRHKLYHERA+II+SRLG+PASSSRGVPPS+ TNRIPMNFANSL RPQ M
Sbjct: 934 MRVKELLDRSRHKLYHERAMIISSRLGVPASSSRGVPPSIPTNRIPMNFANSLQRPQFNM 993
Query: 833 NPQRQMISRPVGTAASTLPNPFASANPAGNSVRPSSQENLSSVGTK 878
NPQ +ISRP TAA+TLPNP SA AG+SVRPSSQENLSSVGT+
Sbjct: 994 NPQGPLISRPGSTAATTLPNPLMSATAAGSSVRPSSQENLSSVGTE 1039
>Medtr3g088480.1 | SWI/SNF complex protein | HC |
chr3:40113660-40120664 | 20130731
Length = 782
Score = 157 bits (396), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 136/262 (51%), Gaps = 27/262 (10%)
Query: 2 LPSFFNGKSENRTPDIYMGVRNWIMKKFHSNPNVQIESKDLSDLDVG-ELDARQEIMEFL 60
+P FF+GKS++ TP+ YM RN+I+ + P +I + D L VG + I+ FL
Sbjct: 193 VPHFFSGKSQDLTPEKYMECRNYIVALYMEEPGKRITASDCQGLQVGVGHEDLTRIVRFL 252
Query: 61 DYWGLINF------HPFPSTGSAVPTSSDDGE----SEKNSLLEKLYHFETLQLSPPIVQ 110
D+WG+IN+ H P+ S + + GE SE ++ L F+ +
Sbjct: 253 DHWGIINYCARTPSHEPPNAVSCLKEDTS-GEIRVPSEALKSIDSLIKFDKTNCKLKAEE 311
Query: 111 KTSLMTPAMTSGLFPE--STISEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADF 168
S +T M SG P+ S I E L E HCN CS Y QK+ D
Sbjct: 312 IYSPLT--MHSGDVPDLDSRIREHLS----------ENHCNYCSCPLPAVYYQSQKEVDI 359
Query: 169 DLCTDCFSNGRFGSGMSSSDFIVMEPAEVAG-VSGGNWTDQXXXXXXXXXXXYKENWNEI 227
LCTDCF +G+F G SS DF+ ++ + G + +WTDQ Y ENWNEI
Sbjct: 360 LLCTDCFHDGKFVVGHSSIDFLRVDSSRDYGELDVESWTDQETLLLLEAMEIYHENWNEI 419
Query: 228 AEHVGTKSKAQCILHFVQMPIE 249
AEHVGTKSKAQCILHF+++P+E
Sbjct: 420 AEHVGTKSKAQCILHFLRLPME 441
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 737 DQEEDEIRQLTSSLIEKQLHKLETKLAFFNGMENVVMRVREHLDRSRHKLYHERALIIAS 796
D EE EI++L +++I QL +LE KL F +E ++M+ E ++R++ + ER +I++
Sbjct: 612 DHEEREIQRLCANIINHQLKRLELKLKQFAEIETLLMKECEQVERAKQRFAAERTRVISA 671
Query: 797 RLG----LPASSSRGVPPSVQTN 815
R G PA ++ GV PS+ +N
Sbjct: 672 RFGTAGTTPAMNASGVGPSMASN 694
>Medtr3g099000.2 | SWI/SNF complex protein | HC |
chr3:45370551-45376366 | 20130731
Length = 540
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 24/259 (9%)
Query: 5 FFNGKSENRTPDIYMGVRNWIMKKFHSNPNVQIESKDLSDLDVGELDARQEIMEFLDYWG 64
+F+G S RTP IY R++I+ K+ P+ ++ ++ VG++ ++ FL+ WG
Sbjct: 41 YFDGTSITRTPKIYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTFLNKVFLFLECWG 100
Query: 65 LINFHPFPSTGSAVPTSSDDGESEKNSLLE--KLYHFETLQLSPPIVQKTSLMTPA---- 118
LIN+ P++ +DGE+EK E KL E +V + + P
Sbjct: 101 LINY--------GAPSAGNDGEAEKEHEKERCKLKVEEGAPNGIRVVATPNSLKPISLPR 152
Query: 119 ---MTSGLFPESTISEELV------KQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFD 169
+ +G ES ++ G + E +C +C C Y K +F
Sbjct: 153 DTKIAAGGGDESGAGVKIAPLASYSDVYGDLIRRKEVNCGNCGDKCGSGHYRSTKD-NFI 211
Query: 170 LCTDCFSNGRFGSGMSSSDFIVMEPAEVAGVSGGNWTDQXXXXXXXXXXXYKENWNEIAE 229
+CT CF NG +G S DF + E +E++ WT+ + ++W +A+
Sbjct: 212 ICTKCFKNGNYGEKRSMEDFKLNESSEISANHSAVWTEGETLLLLESVLKHGDDWELVAQ 271
Query: 230 HVGTKSKAQCILHFVQMPI 248
V TK+K +CI +++P
Sbjct: 272 SVRTKTKLECISKLIELPF 290
>Medtr3g099000.1 | SWI/SNF complex protein | HC |
chr3:45370551-45376390 | 20130731
Length = 540
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 24/259 (9%)
Query: 5 FFNGKSENRTPDIYMGVRNWIMKKFHSNPNVQIESKDLSDLDVGELDARQEIMEFLDYWG 64
+F+G S RTP IY R++I+ K+ P+ ++ ++ VG++ ++ FL+ WG
Sbjct: 41 YFDGTSITRTPKIYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTFLNKVFLFLECWG 100
Query: 65 LINFHPFPSTGSAVPTSSDDGESEKNSLLE--KLYHFETLQLSPPIVQKTSLMTPA---- 118
LIN+ P++ +DGE+EK E KL E +V + + P
Sbjct: 101 LINY--------GAPSAGNDGEAEKEHEKERCKLKVEEGAPNGIRVVATPNSLKPISLPR 152
Query: 119 ---MTSGLFPESTISEELV------KQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFD 169
+ +G ES ++ G + E +C +C C Y K +F
Sbjct: 153 DTKIAAGGGDESGAGVKIAPLASYSDVYGDLIRRKEVNCGNCGDKCGSGHYRSTKD-NFI 211
Query: 170 LCTDCFSNGRFGSGMSSSDFIVMEPAEVAGVSGGNWTDQXXXXXXXXXXXYKENWNEIAE 229
+CT CF NG +G S DF + E +E++ WT+ + ++W +A+
Sbjct: 212 ICTKCFKNGNYGEKRSMEDFKLNESSEISANHSAVWTEGETLLLLESVLKHGDDWELVAQ 271
Query: 230 HVGTKSKAQCILHFVQMPI 248
V TK+K +CI +++P
Sbjct: 272 SVRTKTKLECISKLIELPF 290
>Medtr3g116120.1 | SWI/SNF complex subunit SWI3B-like protein | HC |
chr3:54294108-54291302 | 20130731
Length = 483
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 45/237 (18%)
Query: 13 RTPDIYMGVRNWIMKKFHSNPNVQIESKDLSDLDVGELDARQEIMEFLDYWGLINFHPFP 72
+ P +Y RN I+K F NPN +I D+ VG++ + + + +FL+ WGLIN+H P
Sbjct: 84 KNPRVYKYYRNSIVKFFRFNPNRKITFTDVRKTLVGDVGSIRRVFDFLEAWGLINYH--P 141
Query: 73 STGSAVPTSSDDGESEKNSLLEKLYHFETLQLSPPIVQKTSLMTPAMTSGLFPESTISEE 132
S+ + P +D +++ P S +P+
Sbjct: 142 SSSLSKPLKWEDKDTK------------------PDAASNSAESPS-------------- 169
Query: 133 LVKQEGPA-VEMLEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNGRFGSGMSSSDFIV 191
PA V+ + C+ C C + C+K + LC CF G + GMS+++F
Sbjct: 170 ------PAPVKEAKRICSGCKNLCVMACFACEKN-NMTLCARCFIRGNYRIGMSNTEF-- 220
Query: 192 MEPAEVAGVSGGNWTDQXXXXXXXXXXXYKENWNEIAEHVGTKSKAQCILHFVQMPI 248
+ E++ + WT++ + ++W +A V ++ +C+ F+++P
Sbjct: 221 -KRVEISEETKNEWTEKETLNLLEAITNFGDDWKRVAHQVVGRTDKECVARFLELPF 276
>Medtr5g085170.1 | SWI/SNF complex subunit SWI3B-like protein | HC |
chr5:36752674-36753975 | 20130731
Length = 433
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 48/236 (20%)
Query: 13 RTPDIYMGVRNWIMKKFHSNPNVQIESKDLSDLDVGELDARQEIMEFLDYWGLINFHPFP 72
+ P +Y RN I+K F NPN +I D+ + VG++ + + + +FL+ WGLIN+HP
Sbjct: 58 KNPRVYKYYRNSIVKFFRFNPNRKITFTDVRKIIVGDVGSIRRVFDFLEAWGLINYHPSS 117
Query: 73 STGSAVPTSSDDGESEKNSLLEKLYHFETLQLSPPIVQKTSLMTPAMTSGLFPESTISEE 132
S + D +S+ S ST S
Sbjct: 118 SLSKPLKWEDKDAKSDAAS----------------------------------NSTESPS 143
Query: 133 LVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNGRFGSGMSSSDFIVM 192
LV PA E + C+ C DC + C K + LC CF G + GMS++ F
Sbjct: 144 LV----PANEA-KRICSVC-MDC----FACDKN-NRKLCARCFIRGNYRIGMSNTKF--- 189
Query: 193 EPAEVAGVSGGNWTDQXXXXXXXXXXXYKENWNEIAEHVGTKSKAQCILHFVQMPI 248
+ E++ + WT++ + ++W ++ V ++ +C+ F+++P
Sbjct: 190 KRVEISEETKNEWTEEETLNLLEAITNFGDDWKRVSHQVVGRTDKECVARFLELPF 245
>Medtr2g026310.1 | transcriptional adapter ADA2a | HC |
chr2:9494097-9499023 | 20130731
Length = 551
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 146 YHCNSCSADCSRK-RYHCQKQADFDLCTDCFSNG-RFGSGMSSSDFIVMEPAEVAGVSGG 203
YHCN C+ D + K R C K DFDLC +CFS G S+ ++ VM+ + G
Sbjct: 48 YHCNYCNKDITGKIRIKCAKCPDFDLCIECFSVGAEVTPHKSNHNYRVMDNLNFHFICPG 107
Query: 204 NWTDQXXXXXXXXXXXYKENWNEIAEHVGTKSKAQCILHF 243
D NW E+AEHVGTK+K CI H+
Sbjct: 108 WHADDEILLLEGIEMYGMGNWAEVAEHVGTKNKEACIEHY 147
>Medtr2g026380.1 | transcriptional adapter ADA2 | HC |
chr2:9521699-9525767 | 20130731
Length = 495
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 146 YHCNSCSADCSRK-RYHCQKQADFDLCTDCFSNG-RFGSGMSSSDFIVMEPAEVAGVSGG 203
YHCN C + + R C DFDLC +CFS G S+ D+ VM VS
Sbjct: 48 YHCNYCKKNITGVIRIKCAVCPDFDLCVECFSVGAELTPHKSNHDYRVMNKLSFPLVSPD 107
Query: 204 NWTDQXXXXXXXXXXXYKENWNEIAEHVGTKSKAQCILHFVQMPI 248
D+ ENW E+AEHVGTK+K C+ H+++ +
Sbjct: 108 WNADEEMLILEGIEMYGLENWAEVAEHVGTKNKEACMEHYMKFYL 152
>Medtr3g082790.2 | transcriptional adapter ADA2a | HC |
chr3:37372759-37365661 | 20130731
Length = 525
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 146 YHCNSCSADCSRK-RYHCQKQADFDLCTDCFSNG-RFGSGMSSSDFIVMEPAEVAGVSGG 203
YHCN C+ D S K R C DFDLC +CFS G S+ + VM+ +
Sbjct: 12 YHCNYCNKDISGKIRIKCAVCQDFDLCIECFSVGVELTPHKSNHPYRVMDNLSFPLICP- 70
Query: 204 NWTDQXXXXXXXXXXXYK-ENWNEIAEHVGTKSKAQCILHF 243
+W+ + Y NWN++A+++GTKSK+QCI H+
Sbjct: 71 DWSAEEEMLLLEALDMYGFGNWNDVADNIGTKSKSQCIDHY 111
>Medtr3g082790.3 | transcriptional adapter ADA2a | HC |
chr3:37372759-37365661 | 20130731
Length = 525
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 146 YHCNSCSADCSRK-RYHCQKQADFDLCTDCFSNG-RFGSGMSSSDFIVMEPAEVAGVSGG 203
YHCN C+ D S K R C DFDLC +CFS G S+ + VM+ +
Sbjct: 12 YHCNYCNKDISGKIRIKCAVCQDFDLCIECFSVGVELTPHKSNHPYRVMDNLSFPLICP- 70
Query: 204 NWTDQXXXXXXXXXXXYK-ENWNEIAEHVGTKSKAQCILHF 243
+W+ + Y NWN++A+++GTKSK+QCI H+
Sbjct: 71 DWSAEEEMLLLEALDMYGFGNWNDVADNIGTKSKSQCIDHY 111
>Medtr3g082790.1 | transcriptional adapter ADA2a | HC |
chr3:37372759-37365661 | 20130731
Length = 565
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 146 YHCNSCSADCSRK-RYHCQKQADFDLCTDCFSNG-RFGSGMSSSDFIVMEPAEVAGVSGG 203
YHCN C+ D S K R C DFDLC +CFS G S+ + VM+ +
Sbjct: 52 YHCNYCNKDISGKIRIKCAVCQDFDLCIECFSVGVELTPHKSNHPYRVMDNLSFPLICP- 110
Query: 204 NWTDQXXXXXXXXXXXYK-ENWNEIAEHVGTKSKAQCILHF 243
+W+ + Y NWN++A+++GTKSK+QCI H+
Sbjct: 111 DWSAEEEMLLLEALDMYGFGNWNDVADNIGTKSKSQCIDHY 151
>Medtr7g063290.1 | transcriptional adapter ADA2a | HC |
chr7:23047575-23043493 | 20130731
Length = 487
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 146 YHCNSCSADCSRK-RYHCQKQADFDLCTDCFSNG-RFGSGMSSSDFIVMEPAEVAGVSGG 203
YHCN C+ D + K R C +DFDLC +CFS G S+ + VM+ +
Sbjct: 47 YHCNYCNFDITGKIRIKCVVCSDFDLCVECFSVGAELTPHKSNHAYRVMDNLSFPLICP- 105
Query: 204 NWTDQXXXXXXXXXXXY-KENWNEIAEHVGTKSKAQCILHF 243
+W Y NW E+AEHVGTK+K C H+
Sbjct: 106 DWNADEEILLLEGLEMYGMNNWAEVAEHVGTKNKEACTEHY 146
>Medtr3g081360.1 | transcriptional adapter ADA2a | HC |
chr3:36848839-36856562 | 20130731
Length = 513
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 146 YHCNSCSADCSRKRY-HCQKQADFDLCTDCFSNG-RFGSGMSSSDFIVMEPAEVAGVSGG 203
YHCN C + S K + C DFDLC +CF G S+ + VM+ ++
Sbjct: 34 YHCNYCKKNISGKIHIKCAVCQDFDLCIECFFVGAELTPHKSNHPYRVMDSLSFP-LTSP 92
Query: 204 NWTDQXXXXXXXXXXXYK-ENWNEIAEHVGTKSKAQCILHF 243
+W+ Y NWN +AE+VGTKSK+QCI H+
Sbjct: 93 DWSAGEEKLLIEAIDMYGFGNWNGVAENVGTKSKSQCIDHY 133
>Medtr3g081380.1 | transcriptional adapter ADA2 | HC |
chr3:36860711-36862546 | 20130731
Length = 189
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 141 VEMLEYHCNSCSADCSRKRY-HCQKQADFDLCTDCFSNG-RFGSGMSSSDFIVMEPAEVA 198
V + CN C D S K + C DF+LC CFS G S+ + VME
Sbjct: 42 VSLYRCKCNYCKTDISGKAHIKCAVCQDFNLCVKCFSVGAEVTPHKSNHPYRVMEDLSFP 101
Query: 199 GVSGGNWTDQXXXXXXXXXXXYK-ENWNEIAEHVGTKSKAQCILHF 243
++ +W+ Y ENWN +AEHVGTKSK +CI H+
Sbjct: 102 -LTCPDWSAHEERLLLEALDMYGFENWNGVAEHVGTKSKPECIDHY 146
>Medtr6g053260.1 | F-box and associated interaction domain protein |
LC | chr6:19123038-19126671 | 20130731
Length = 708
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 13 RTPDIYMGVRNWIMKKFHSNPNVQIESKDLSDLDVGELDARQEIMEFLDYWGLINFHP 70
+ P +Y RN I+K F NPN +I D+ VG++ + + + +FL+ WGLIN+HP
Sbjct: 58 KNPRVYKYYRNSIVKFFRFNPNRKITFTDVRKTLVGDVGSIRRVFDFLEDWGLINYHP 115