Miyakogusa Predicted Gene

Lj3g3v3337500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3337500.1 Non Characterized Hit- tr|C4YCH1|C4YCH1_CLAL4
Putative uncharacterized protein OS=Clavispora
lusitan,29.59,7e-19,coiled-coil,NULL; TUMOR NECROSIS FACTOR
SUPERFAMILY, MEMBER 5-INDUCED PROTEIN 1 (CLAST3),NULL;
seg,N,CUFF.45623.1
         (280 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g068475.1 | clast3, related protein | HC | chr4:25716672-2...   478   e-135
Medtr4g068475.2 | clast3, related protein | HC | chr4:25716728-2...   357   1e-98
Medtr4g068475.3 | clast3, related protein | HC | chr4:25716728-2...   249   2e-66

>Medtr4g068475.1 | clast3, related protein | HC |
           chr4:25716672-25721160 | 20130731
          Length = 280

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 226/280 (80%), Positives = 248/280 (88%)

Query: 1   MEFVAEEGKHLNDNCSTLILPALSIGNVGQLAADLLVSSMATERVGYLDDPHVLPCVGND 60
           M+F+ EEGKHL+++CSTLILPA+SIGNVGQL ADLLVSSM +E+VGYLDDP+VLPCVGND
Sbjct: 1   MKFIPEEGKHLHEDCSTLILPAVSIGNVGQLTADLLVSSMGSEKVGYLDDPYVLPCVGND 60

Query: 61  AYGPVPQGDLALPLEAYDSPSNALTIIQQRSPVIKGMMLDFAKNMADFLAGSGKKHIVLL 120
           AYGP PQGDLALPLEAYDSPSN LT+IQQRSPVIKGMML+FAKNMADF+AGSGKKHI++L
Sbjct: 61  AYGPFPQGDLALPLEAYDSPSNGLTVIQQRSPVIKGMMLEFAKNMADFIAGSGKKHIIIL 120

Query: 121 SSLDFGKWQKVDMSSGLQIYYLSSANSNGTDENCESLGWKKLQEYDPSQKHWKFLSDLAE 180
           SSLDFGKWQKVDMSSGLQIYYLSSANSNG DENCE LGWKKLQEYDPSQKHWK+L+DLAE
Sbjct: 121 SSLDFGKWQKVDMSSGLQIYYLSSANSNGADENCEQLGWKKLQEYDPSQKHWKYLNDLAE 180

Query: 181 GNATRXXXXXXXXXXXXXXXXXXXPFAALYSFLKAKGLKVTCLLCYCSEGDNISDAFQLA 240
           GNAT                    PFAAL+SFLKAKGLKVTCLLCYCSEGDN SDAFQLA
Sbjct: 181 GNATPEDTTSIEDELEEENYYASLPFAALFSFLKAKGLKVTCLLCYCSEGDNTSDAFQLA 240

Query: 241 DAVCKLLRLTPPTSGIEGNKWRVPLSWMTVYGPPPDMSMF 280
           DA CKLLRL+ P SGIEG KWR+PLSWM+VYGPPPD+S+F
Sbjct: 241 DAACKLLRLSHPNSGIEGGKWRIPLSWMSVYGPPPDVSIF 280


>Medtr4g068475.2 | clast3, related protein | HC |
           chr4:25716728-25720423 | 20130731
          Length = 240

 Score =  357 bits (915), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 170/216 (78%), Positives = 188/216 (87%)

Query: 1   MEFVAEEGKHLNDNCSTLILPALSIGNVGQLAADLLVSSMATERVGYLDDPHVLPCVGND 60
           M+F+ EEGKHL+++CSTLILPA+SIGNVGQL ADLLVSSM +E+VGYLDDP+VLPCVGND
Sbjct: 1   MKFIPEEGKHLHEDCSTLILPAVSIGNVGQLTADLLVSSMGSEKVGYLDDPYVLPCVGND 60

Query: 61  AYGPVPQGDLALPLEAYDSPSNALTIIQQRSPVIKGMMLDFAKNMADFLAGSGKKHIVLL 120
           AYGP PQGDLALPLEAYDSPSN LT+IQQRSPVIKGMML+FAKNMADF+AGSGKKHI++L
Sbjct: 61  AYGPFPQGDLALPLEAYDSPSNGLTVIQQRSPVIKGMMLEFAKNMADFIAGSGKKHIIIL 120

Query: 121 SSLDFGKWQKVDMSSGLQIYYLSSANSNGTDENCESLGWKKLQEYDPSQKHWKFLSDLAE 180
           SSLDFGKWQKVDMSSGLQIYYLSSANSNG DENCE LGWKKLQEYDPSQKHWK+L+DLAE
Sbjct: 121 SSLDFGKWQKVDMSSGLQIYYLSSANSNGADENCEQLGWKKLQEYDPSQKHWKYLNDLAE 180

Query: 181 GNATRXXXXXXXXXXXXXXXXXXXPFAALYSFLKAK 216
           GNAT                    PFAAL+SFLK +
Sbjct: 181 GNATPEDTTSIEDELEEENYYASLPFAALFSFLKNQ 216


>Medtr4g068475.3 | clast3, related protein | HC |
           chr4:25716728-25720423 | 20130731
          Length = 174

 Score =  249 bits (637), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 121/163 (74%), Positives = 140/163 (85%), Gaps = 3/163 (1%)

Query: 1   MEFVAEEGKHLNDNCSTLILPALSIGNVGQLAADLLVSSMATERVGYLDDPHVLPCVGND 60
           M+F+ EEGKHL+++CSTLILPA+SIGNVGQL ADLLVSSM +E+VGYLDDP+VLPCVGND
Sbjct: 1   MKFIPEEGKHLHEDCSTLILPAVSIGNVGQLTADLLVSSMGSEKVGYLDDPYVLPCVGND 60

Query: 61  AYGPVPQGDLALPLEAYDSPSNALTIIQQRSPVIKGMMLDFAKNMADFLAGSGKKHIVLL 120
           AYGP PQGDLALPLEAYDSPSN LT+IQQRSPVIKGMML+FAKNMADF+AGSGKKHI++L
Sbjct: 61  AYGPFPQGDLALPLEAYDSPSNGLTVIQQRSPVIKGMMLEFAKNMADFIAGSGKKHIIIL 120

Query: 121 SSLDFGKWQKVDMSSGLQIYYLSSANSNGTDENCESLGWKKLQ 163
           SSLDFGKWQKVDMS  +  Y + +A       N  SLG +  +
Sbjct: 121 SSLDFGKWQKVDMSRFIT-YLVPTATEQMKTVN--SLGGRNFR 160