Miyakogusa Predicted Gene

Lj3g3v3336210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3336210.1 Non Characterized Hit- tr|F6HAX0|F6HAX0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,56.1,3e-19,seg,NULL,CUFF.45592.1
         (156 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g068280.1 | trigger factor-like protein, putative | HC | c...   155   1e-38

>Medtr4g068280.1 | trigger factor-like protein, putative | HC |
           chr4:25601552-25604786 | 20130731
          Length = 218

 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/156 (59%), Positives = 109/156 (69%), Gaps = 27/156 (17%)

Query: 1   MMLASCSS--SITPGA--ASFTTRTCCSXXXXXXXXXXLAPPNAQSRCIVSLSLGPPL-- 54
           MM+ + S+  SIT G   ASFTT                  PNA+SR    LS   PL  
Sbjct: 2   MMVGAVSNFNSITLGVRVASFTT------------------PNAKSR---GLSFYLPLSP 40

Query: 55  RRKSLDILSSSTRITLRHLNTPISAVNSGLEASITDSDENSAILTNAQIVLESEDESKIQ 114
            R+SLDILS+S   TLRHLNTPISAVNSGLEASITDS++ SA LT+A +V E  D+++IQ
Sbjct: 41  WRRSLDILSTSNGTTLRHLNTPISAVNSGLEASITDSNDISAFLTDATVVAEPGDDNRIQ 100

Query: 115 LRVDLTGDQTERVFDRTLISLGRTAPPVPGFRMQKG 150
           LRVDLTG QT++VFDR LI+LGRTAPPVPGFRMQKG
Sbjct: 101 LRVDLTGVQTQKVFDRILINLGRTAPPVPGFRMQKG 136