Miyakogusa Predicted Gene

Lj3g3v3336140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3336140.1 Non Characterized Hit- tr|I3ST02|I3ST02_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.32,0,seg,NULL;
coiled-coil,NULL; PspA_IM30,PspA/IM30; FAMILY NOT
NAMED,NULL,CUFF.45619.1
         (296 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g068210.3 | membrane-associated 30 kDa protein | HC | chr4...   443   e-124
Medtr4g068210.1 | membrane-associated 30 kDa protein | HC | chr4...   443   e-124
Medtr4g068210.2 | membrane-associated 30 kDa protein | HC | chr4...   380   e-106

>Medtr4g068210.3 | membrane-associated 30 kDa protein | HC |
           chr4:25570695-25576398 | 20130731
          Length = 319

 Score =  443 bits (1139), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/296 (77%), Positives = 244/296 (82%), Gaps = 5/296 (1%)

Query: 1   MSTKLQIFTGLXXXXXXXXXXXXXXTLCMLKKPLTTSFLGTGTVEVLRLSGMRVVKPVRA 60
           M+TKLQIFT L              +   L+KPL TSF GT     ++  GMR+ KPVR 
Sbjct: 1   MATKLQIFTQLPSAPLQSSS-----SSSSLRKPLATSFFGTRPANTVKFRGMRIAKPVRG 55

Query: 61  PRRGGARMNLFDRFARVVKSYANAVISSFEDPEKILEQAVLEMNDDLTKMRQATAQVLAS 120
               GA MNLF+RF RVVKSYANA++SSFEDPEKILEQAVLEMNDDLTKMRQATAQVLAS
Sbjct: 56  GGAIGAGMNLFERFTRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLAS 115

Query: 121 QKRMENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSLKAQLDQQKG 180
           QKRMENKYKAA QASEEWYRKAQLALQKGEEDLAREALKRRKSFADNAS+LKAQLDQQKG
Sbjct: 116 QKRMENKYKAATQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKG 175

Query: 181 VVENLVSNTRLLESKISEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEE 240
           VV++LVSNTRLLESKI EARSKKDTLKARAQSAKT+TKVSEMLGNVNTS ALSAFEKMEE
Sbjct: 176 VVDSLVSNTRLLESKIQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEE 235

Query: 241 KVMTMESQAEALGQLTTDDLDGKFALLESSSVDDDLANXXXXXXXXXXXXXXPPGR 296
           KVMTMESQAEALGQLT+DDL+GKFA+LESSSVDDDLAN              PPGR
Sbjct: 236 KVMTMESQAEALGQLTSDDLEGKFAMLESSSVDDDLANLKKELSGSSKKGELPPGR 291


>Medtr4g068210.1 | membrane-associated 30 kDa protein | HC |
           chr4:25570695-25576398 | 20130731
          Length = 319

 Score =  443 bits (1139), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/296 (77%), Positives = 244/296 (82%), Gaps = 5/296 (1%)

Query: 1   MSTKLQIFTGLXXXXXXXXXXXXXXTLCMLKKPLTTSFLGTGTVEVLRLSGMRVVKPVRA 60
           M+TKLQIFT L              +   L+KPL TSF GT     ++  GMR+ KPVR 
Sbjct: 1   MATKLQIFTQLPSAPLQSSS-----SSSSLRKPLATSFFGTRPANTVKFRGMRIAKPVRG 55

Query: 61  PRRGGARMNLFDRFARVVKSYANAVISSFEDPEKILEQAVLEMNDDLTKMRQATAQVLAS 120
               GA MNLF+RF RVVKSYANA++SSFEDPEKILEQAVLEMNDDLTKMRQATAQVLAS
Sbjct: 56  GGAIGAGMNLFERFTRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLAS 115

Query: 121 QKRMENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSLKAQLDQQKG 180
           QKRMENKYKAA QASEEWYRKAQLALQKGEEDLAREALKRRKSFADNAS+LKAQLDQQKG
Sbjct: 116 QKRMENKYKAATQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKG 175

Query: 181 VVENLVSNTRLLESKISEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEE 240
           VV++LVSNTRLLESKI EARSKKDTLKARAQSAKT+TKVSEMLGNVNTS ALSAFEKMEE
Sbjct: 176 VVDSLVSNTRLLESKIQEARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEE 235

Query: 241 KVMTMESQAEALGQLTTDDLDGKFALLESSSVDDDLANXXXXXXXXXXXXXXPPGR 296
           KVMTMESQAEALGQLT+DDL+GKFA+LESSSVDDDLAN              PPGR
Sbjct: 236 KVMTMESQAEALGQLTSDDLEGKFAMLESSSVDDDLANLKKELSGSSKKGELPPGR 291


>Medtr4g068210.2 | membrane-associated 30 kDa protein | HC |
           chr4:25571077-25576398 | 20130731
          Length = 247

 Score =  380 bits (977), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/219 (87%), Positives = 202/219 (92%)

Query: 78  VKSYANAVISSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAAQQASEE 137
           ++SYANA++SSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAA QASEE
Sbjct: 1   MQSYANAIVSSFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRMENKYKAATQASEE 60

Query: 138 WYRKAQLALQKGEEDLAREALKRRKSFADNASSLKAQLDQQKGVVENLVSNTRLLESKIS 197
           WYRKAQLALQKGEEDLAREALKRRKSFADNAS+LKAQLDQQKGVV++LVSNTRLLESKI 
Sbjct: 61  WYRKAQLALQKGEEDLAREALKRRKSFADNASALKAQLDQQKGVVDSLVSNTRLLESKIQ 120

Query: 198 EARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMTMESQAEALGQLTT 257
           EARSKKDTLKARAQSAKT+TKVSEMLGNVNTS ALSAFEKMEEKVMTMESQAEALGQLT+
Sbjct: 121 EARSKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMTMESQAEALGQLTS 180

Query: 258 DDLDGKFALLESSSVDDDLANXXXXXXXXXXXXXXPPGR 296
           DDL+GKFA+LESSSVDDDLAN              PPGR
Sbjct: 181 DDLEGKFAMLESSSVDDDLANLKKELSGSSKKGELPPGR 219