Miyakogusa Predicted Gene
- Lj3g3v3336120.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3336120.1 Non Characterized Hit- tr|I1LJM2|I1LJM2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37576 PE,78.59,0,no
description,NULL; coiled-coil,NULL; AARP2CN (NUC121) domain,AARP2CN;
seg,NULL; DUF663,Ribosome bi,CUFF.45627.1
(1022 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g068150.1 | P-loop nucleoside triphosphate hydrolase super... 1492 0.0
Medtr4g068150.2 | P-loop nucleoside triphosphate hydrolase super... 1487 0.0
Medtr3g115250.1 | pre-rRNA-processing TSR1-like protein | HC | c... 71 6e-12
Medtr7g029115.1 | pre-rRNA-processing TSR1-like protein | HC | c... 68 6e-11
>Medtr4g068150.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr4:25549394-25539788 |
20130731
Length = 1172
Score = 1492 bits (3863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 759/1032 (73%), Positives = 820/1032 (79%), Gaps = 34/1032 (3%)
Query: 1 METFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSG 60
METFEFLNILQVHGFPKVMGVLTHLD FKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSG
Sbjct: 163 METFEFLNILQVHGFPKVMGVLTHLDGFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSG 222
Query: 61 LIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLADRFEDITPPEKVHSNNKCDRKIT 120
LIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVL DRFEDITPPE+VH+NNKCDRK+T
Sbjct: 223 LIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPPEQVHANNKCDRKVT 282
Query: 121 LYGYLRGCNLKKGNKVHIAGVGDYSLAGVTALPDPCPLPSAAKKKGLRDKEKLFYAPMSG 180
LYGYLRGCNLKKGNKVHIAGVGDY LA VT LPDPCPLPSAAKKKGLRDKEKLFYAPMSG
Sbjct: 283 LYGYLRGCNLKKGNKVHIAGVGDYGLAHVTGLPDPCPLPSAAKKKGLRDKEKLFYAPMSG 342
Query: 181 LGDLLYDKDAVYININDHFVQFSKVDDENSAITRKGNERDIGEVLVRSLQETKYPINEKL 240
+GDLLYDKDAVYININDHFVQFSKVDDEN A+T KG ERD+G LV+SLQ TKY INEKL
Sbjct: 343 VGDLLYDKDAVYININDHFVQFSKVDDENFAMTSKGKERDVGVDLVKSLQNTKYSINEKL 402
Query: 241 ENSMINLFAQ----SSEALAEAQGTNMDVEQDGIIETVDYNEMXXXXXXXXXXXXXXXXM 296
ENS INLF Q SSEAL AQGTN DVE+DG +ET D NE+
Sbjct: 403 ENSFINLFDQKGKVSSEALGGAQGTNEDVEEDGKVETSDNNEIDS--------------- 447
Query: 297 TGSGLPDQAEDDAAGDKSTNKDHLEEHIEFHNGRRRRRAIFGNDADQSDLMXXXXXXXXX 356
S D+ E DA + N HL+E IEFHNGR+RR+AIFGND DQSD M
Sbjct: 448 DASESSDRDEADAITNDDGN--HLKEKIEFHNGRQRRKAIFGNDIDQSDQMDSEEEEEEE 505
Query: 357 XXXXXXXXXXXXXXXXXXXXXMGNVSKWKESLAERTLSQKTPSLMQLVYGESTANLISIN 416
MGN+SKWKESLAER L++K+PSLMQLVYGEST N S++
Sbjct: 506 EEEGEDEEDEDDTHEDD----MGNISKWKESLAERILARKSPSLMQLVYGESTNNSTSMD 561
Query: 417 KENXXXXXXXXXGDFFEPIEEVKKKNVRDGFNDGNVNTEDYSKCAQFMDKRWDKKDNEEI 476
+EN GDFF P EE+KK+ RDG +DG V+TED SKCA+ M ++WD+KD+ EI
Sbjct: 562 EENDSSEDEEN-GDFFIPKEEIKKQYTRDGLDDGMVHTEDCSKCAKLMSQKWDEKDHGEI 620
Query: 477 RNRFVTGNLAKAALRNGLPKATTEEENDD----VYGDFEDLETGEKIENNQTDD----TT 528
RNRFV+GNLAKAA RN L KA TEEE +D VYGDFEDLETGE EN +TDD TT
Sbjct: 621 RNRFVSGNLAKAARRNALQKANTEEEEEDEDEDVYGDFEDLETGENHENYKTDDAFAITT 680
Query: 529 HNGDDLEAETRRLKKLALRAKFDSRFXXXXXXXXXXXXXXXXAKFRRGQPNETSYFDKLK 588
G D EAE RRLKKLAL AKF SR+ AKF R QPNE++Y DKLK
Sbjct: 681 QKGVDREAEERRLKKLALHAKFVSRYDDDPETPEEDTGNENEAKFHREQPNESNYIDKLK 740
Query: 589 EEIELQKQMNIAELNDLDEATRLEIEGFRTGTYVRLEVHDVPCEMVEYFDPYHPILIGGV 648
EEIEL+KQMNIAELNDLDE TRLE+EGFRTGTY+RLEVHDVPCEMVE+FDPYHPIL+GGV
Sbjct: 741 EEIELRKQMNIAELNDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGV 800
Query: 649 GLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSAGWRRYQTTPVYAIEDHNGRHRMLKYT 708
GLGEENVGYMQARLKRHRWHKKVLKTRDPIIVS GWRRYQTTPVYAIED NGRHRMLKYT
Sbjct: 801 GLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYT 860
Query: 709 PEHMHCLAMFYGPLAPPNTGIVAVQNLSNNQATFRITATAVVLEFNHAARIVKKIKLVGY 768
PEHMHCLAMF+GPLAPPNTGIVAVQ LSNNQATFRITATAVV+EFNHAARIVKKIKLVGY
Sbjct: 861 PEHMHCLAMFWGPLAPPNTGIVAVQTLSNNQATFRITATAVVVEFNHAARIVKKIKLVGY 920
Query: 769 PCKIFKKTALIKEMFTSDLEIARFEGAAIRTVSGIRGQVKKAAKEEIGNQPKRKGGITKE 828
PCKIFKKTALIK+MFTSDLE+ARFEGAAIRTVSGIRGQVKK AKEEIGNQPKRKGG KE
Sbjct: 921 PCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKVAKEEIGNQPKRKGGQIKE 980
Query: 829 GIARCTFEDKILMSDIVFLRAWTQVEVPQFYNLLTTALQPRDQTWKGMRTVAELRRDHDL 888
GIARCTFEDKILMSDIVFLRAWTQVEVPQFYN LTTALQPRDQTWKGMRTVAELRR+H+L
Sbjct: 981 GIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDQTWKGMRTVAELRREHNL 1040
Query: 889 PVPVNKDSLYKKIERKPRKFNPLVVPRSLQERLPFASKPKETPKRNQPLLEQRRQKGVVM 948
P+PVNKDSLYKKIERKPRKFNPLV+P+SLQ LPF SKPK TPKR + + RRQKGVV+
Sbjct: 1041 PIPVNKDSLYKKIERKPRKFNPLVIPKSLQANLPFESKPKHTPKRKRLSFDDRRQKGVVV 1100
Query: 949 EPRERKVLALVQHIQLINHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYR 1008
EPRERK+ ALVQH+QL+ + YR
Sbjct: 1101 EPRERKIHALVQHLQLMKTEKIKKRKHKEGEKRKVLEAERAKEELVSKKRRREERRDKYR 1160
Query: 1009 TQDKSSKKMRRS 1020
TQDK +KK+RR+
Sbjct: 1161 TQDKLNKKIRRA 1172
>Medtr4g068150.2 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr4:25549270-25539853 |
20130731
Length = 1167
Score = 1487 bits (3850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 759/1032 (73%), Positives = 820/1032 (79%), Gaps = 39/1032 (3%)
Query: 1 METFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSG 60
METFEFLNILQVHGFPKVMGVLTHLD FKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSG
Sbjct: 163 METFEFLNILQVHGFPKVMGVLTHLDGFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSG 222
Query: 61 LIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLADRFEDITPPEKVHSNNKCDRKIT 120
LIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVL DRFEDITPPE+VH+NNKCDRK+T
Sbjct: 223 LIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPPEQVHANNKCDRKVT 282
Query: 121 LYGYLRGCNLKKGNKVHIAGVGDYSLAGVTALPDPCPLPSAAKKKGLRDKEKLFYAPMSG 180
LYGYLRGCNLKKGNKVHIAGVGDY LA VT LPDPCPLPSAAKKKGLRDKEKLFYAPMSG
Sbjct: 283 LYGYLRGCNLKKGNKVHIAGVGDYGLAHVTGLPDPCPLPSAAKKKGLRDKEKLFYAPMSG 342
Query: 181 LGDLLYDKDAVYININDHFVQFSKVDDENSAITRKGNERDIGEVLVRSLQETKYPINEKL 240
+GDLLYDKDAVYININDHFVQFSKVDDEN A+T KG ERD+G LV+SLQ TKY INEKL
Sbjct: 343 VGDLLYDKDAVYININDHFVQFSKVDDENFAMTSKGKERDVGVDLVKSLQNTKYSINEKL 402
Query: 241 ENSMINLFAQ----SSEALAEAQGTNMDVEQDGIIETVDYNEMXXXXXXXXXXXXXXXXM 296
ENS INLF Q SSEAL AQGTN DVE+DG +ET D NE+
Sbjct: 403 ENSFINLFDQKGKVSSEALGGAQGTNEDVEEDGKVETSDNNEIDS--------------- 447
Query: 297 TGSGLPDQAEDDAAGDKSTNKDHLEEHIEFHNGRRRRRAIFGNDADQSDLMXXXXXXXXX 356
S D+ E DA + N HL+E IEFHNGR+RR+AIFGND DQSD M
Sbjct: 448 DASESSDRDEADAITNDDGN--HLKEKIEFHNGRQRRKAIFGNDIDQSDQMDSEEEEEEE 505
Query: 357 XXXXXXXXXXXXXXXXXXXXXMGNVSKWKESLAERTLSQKTPSLMQLVYGESTANLISIN 416
MGN+SKWKESLAER L++K+PSLMQLVYGEST N S++
Sbjct: 506 EEEGEDEEDEDDTHEDD----MGNISKWKESLAERILARKSPSLMQLVYGESTNNSTSMD 561
Query: 417 KENXXXXXXXXXGDFFEPIEEVKKKNVRDGFNDGNVNTEDYSKCAQFMDKRWDKKDNEEI 476
+EN GDFF P EE+KK+ RDG +DG V+TED SKCA+ M ++WD+KD+ EI
Sbjct: 562 EENDSSEDEEN-GDFFIPKEEIKKQYTRDGLDDGMVHTEDCSKCAKLMSQKWDEKDHGEI 620
Query: 477 RNRFVTGNLAKAALRNGLPKATTEEENDD----VYGDFEDLETGEKIENNQTDD----TT 528
RNRFV+GNLAKAA RN L KA TEEE +D VYGDFEDLETGE EN +TDD TT
Sbjct: 621 RNRFVSGNLAKAARRNALQKANTEEEEEDEDEDVYGDFEDLETGENHENYKTDDAFAITT 680
Query: 529 HNGDDLEAETRRLKKLALRAKFDSRFXXXXXXXXXXXXXXXXAKFRRGQPNETSYFDKLK 588
G D EAE RRLKKLAL AKF SR+ AKF R QPNE++Y DKLK
Sbjct: 681 QKGVDREAEERRLKKLALHAKFVSRYPFLEDTGNENE-----AKFHREQPNESNYIDKLK 735
Query: 589 EEIELQKQMNIAELNDLDEATRLEIEGFRTGTYVRLEVHDVPCEMVEYFDPYHPILIGGV 648
EEIEL+KQMNIAELNDLDE TRLE+EGFRTGTY+RLEVHDVPCEMVE+FDPYHPIL+GGV
Sbjct: 736 EEIELRKQMNIAELNDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGV 795
Query: 649 GLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSAGWRRYQTTPVYAIEDHNGRHRMLKYT 708
GLGEENVGYMQARLKRHRWHKKVLKTRDPIIVS GWRRYQTTPVYAIED NGRHRMLKYT
Sbjct: 796 GLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYT 855
Query: 709 PEHMHCLAMFYGPLAPPNTGIVAVQNLSNNQATFRITATAVVLEFNHAARIVKKIKLVGY 768
PEHMHCLAMF+GPLAPPNTGIVAVQ LSNNQATFRITATAVV+EFNHAARIVKKIKLVGY
Sbjct: 856 PEHMHCLAMFWGPLAPPNTGIVAVQTLSNNQATFRITATAVVVEFNHAARIVKKIKLVGY 915
Query: 769 PCKIFKKTALIKEMFTSDLEIARFEGAAIRTVSGIRGQVKKAAKEEIGNQPKRKGGITKE 828
PCKIFKKTALIK+MFTSDLE+ARFEGAAIRTVSGIRGQVKK AKEEIGNQPKRKGG KE
Sbjct: 916 PCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKVAKEEIGNQPKRKGGQIKE 975
Query: 829 GIARCTFEDKILMSDIVFLRAWTQVEVPQFYNLLTTALQPRDQTWKGMRTVAELRRDHDL 888
GIARCTFEDKILMSDIVFLRAWTQVEVPQFYN LTTALQPRDQTWKGMRTVAELRR+H+L
Sbjct: 976 GIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDQTWKGMRTVAELRREHNL 1035
Query: 889 PVPVNKDSLYKKIERKPRKFNPLVVPRSLQERLPFASKPKETPKRNQPLLEQRRQKGVVM 948
P+PVNKDSLYKKIERKPRKFNPLV+P+SLQ LPF SKPK TPKR + + RRQKGVV+
Sbjct: 1036 PIPVNKDSLYKKIERKPRKFNPLVIPKSLQANLPFESKPKHTPKRKRLSFDDRRQKGVVV 1095
Query: 949 EPRERKVLALVQHIQLINHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYR 1008
EPRERK+ ALVQH+QL+ + YR
Sbjct: 1096 EPRERKIHALVQHLQLMKTEKIKKRKHKEGEKRKVLEAERAKEELVSKKRRREERRDKYR 1155
Query: 1009 TQDKSSKKMRRS 1020
TQDK +KK+RR+
Sbjct: 1156 TQDKLNKKIRRA 1167
>Medtr3g115250.1 | pre-rRNA-processing TSR1-like protein | HC |
chr3:53892651-53884473 | 20130731
Length = 793
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 113/230 (49%), Gaps = 11/230 (4%)
Query: 584 FDKLKEEIELQKQMNIAELNDLDEATRLEIEGFRTGTYVRLEVHDVPCEMVE---YFDPY 640
FD K LQK + +A+ +L++ R + G+Y RL + +VP +
Sbjct: 527 FDNFKR---LQKHV-LAKALELEKENREDC--VSVGSYARLHIKEVPSAVASKLCIIAKT 580
Query: 641 HPILIGGVGLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSAGWRRYQTTPVYAIEDHN- 699
PI G+ E + + +K+H ++ +K+++ +I G+R++ P ++ E N
Sbjct: 581 TPITTCGLLKHESKLSVLHFSVKKHETYETPIKSKEELIFHVGFRQFVGRPTFSSEFINT 640
Query: 700 GRHRMLKYTPEHMHCLAMFYGPLAPPNTGIVAVQNLSNNQATFRITATAVVLEFNHAARI 759
+++M ++ +A Y P++ P + ++ + + AT + A + + I
Sbjct: 641 DKNKMERFLHAGRFSVASIYAPISFPPLPTIVLKRVRED-ATPVVAAVGSLKTVDPDRII 699
Query: 760 VKKIKLVGYPCKIFKKTALIKEMFTSDLEIARFEGAAIRTVSGIRGQVKK 809
+K++ L GYP ++ K+ A ++ MF + ++ F+ + T G+RG++K+
Sbjct: 700 LKRVILTGYPQRVSKRKASVRHMFYNPEDVKWFKPVELYTKRGLRGRIKE 749
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 73 NLARFISVMKFHPLS---WRTSHPYVLADRFEDITPPEKVHSNNKCDRKITLYGYLRGCN 129
+L +F+S+ K L WRT Y++A++ + V+ N + L GYLR N
Sbjct: 228 DLHKFLSLFKEQRLKTPHWRTQRSYLMANKVD------TVYDGNSEKCTLVLSGYLRARN 281
Query: 130 LKKGNKVHIAGVGDYSLAGVTALPDPCPLPSAAKKKGLRDKEKL 173
L VH++G GD+ L + L DP PL ++ K + L D +++
Sbjct: 282 LSVNQLVHVSGAGDFQLCKIEVLKDPFPL-NSRKNQDLMDSDEV 324
>Medtr7g029115.1 | pre-rRNA-processing TSR1-like protein | HC |
chr7:10210083-10219159 | 20130731
Length = 702
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 97/197 (49%), Gaps = 7/197 (3%)
Query: 618 TGTYVRLEVHDVPCEMVE---YFDPYHPILIGGVGLGEENVGYMQARLKRHRWHKKVLKT 674
G+Y+RL + +VP + P+ G+ E V + +K++ + +K+
Sbjct: 451 VGSYIRLHIMEVPTGVASKLCILSKTTPVTACGLLEHENEVSVLHFSVKKNETYHAPIKS 510
Query: 675 RDPIIVSAGWRRYQTTPVYAIEDHNG-RHRMLKYTPEHMHCLAMFYGPLA-PPNTGIVAV 732
++ +I G+R++ P+++ E N +++M ++ +A Y P++ P I+
Sbjct: 511 KEELIFHVGFRQFVCRPIFSCEFKNADKNKMERFLHAGRFSIASVYAPISFSPFPTIILK 570
Query: 733 QNLSNNQATFRITATAVVLEFNHAARIVKKIKLVGYPCKIFKKTALIKEMFTSDLEIARF 792
+ + + AT + A + + I+K++ L GYP ++ K+ A +K MF + ++ F
Sbjct: 571 RAVED--ATPEVAALGSLKTVDRDRIILKRLILTGYPQRVSKRKASVKHMFYNPEDVKFF 628
Query: 793 EGAAIRTVSGIRGQVKK 809
+ I T +RG++K+
Sbjct: 629 KPLEIYTKRSLRGRIKE 645