Miyakogusa Predicted Gene

Lj3g3v3336110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3336110.1 Non Characterized Hit- tr|I1NPY2|I1NPY2_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,27.25,2e-18,seg,NULL,CUFF.45583.1
         (616 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g068005.1 | hypothetical protein | HC | chr4:25537030-2553...   605   e-173

>Medtr4g068005.1 | hypothetical protein | HC |
           chr4:25537030-25532924 | 20130731
          Length = 648

 Score =  605 bits (1560), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 348/654 (53%), Positives = 430/654 (65%), Gaps = 44/654 (6%)

Query: 1   MKFLRNDARTIVSHLKRQEKQIKLKRRWLLGIPSTKSERKKLDKIFKNS-YMPESILRED 59
           MKF R D  +I+   KRQ+KQIKLKRRWLLG+P T  E KKL +I K   Y PES+LR+D
Sbjct: 1   MKFCRTDISSILRDAKRQDKQIKLKRRWLLGLPITTKEGKKLKEICKTGWYSPESLLRQD 60

Query: 60  DIFYESVRTHVEGALGAQSIERENHVPLDDMHLTQVSDMKRLILSCLNKLTTKGLHRLAM 119
           D+FYESVRT VE A GA  IE EN +P DDM L Q+ + KR ILSCL+ LTTKGL+ LAM
Sbjct: 61  DLFYESVRTRVERAFGAHYIESENCIPQDDMDLNQIPNFKRFILSCLDNLTTKGLYLLAM 120

Query: 120 IVTGGSIESVITRGNLKMIIKGXXXXXXXXXXDNHQQRETRGQLFQLLSDPQHFRDRSGP 179
           IV G +++   TR NLK IIK           +  QQ ETR QLFQLL++PQ++R R   
Sbjct: 121 IVGGDTVKYERTRSNLKKIIKSSLSSVLSSKRNKDQQLETRKQLFQLLNNPQNYRQRCEL 180

Query: 180 LPELRYQFYHASVSKVLDELPSLPTQTLNAMRMKLKGKKAPIPQLQPCKHGWDRDHLMKL 239
           LP    QFYHA+V KVL  L  LP+QTL AMR KLKG KAP+PQLQP K+GW R+HL++ 
Sbjct: 181 LPGSESQFYHAAVVKVLCGLEKLPSQTLLAMRRKLKGIKAPMPQLQPFKNGWGRNHLIRQ 240

Query: 240 VNNMSRKMLSQHDRGNELQEPLAKAMAVADLSLQVTNGDRSIFSEEFYQFSPEVMSLQSD 299
           VN +SRKML + D GN+LQEPLA AM+VAD SL++  G  S F EE YQFSPEV SLQSD
Sbjct: 241 VNKISRKMLLELDGGNKLQEPLANAMSVADFSLKLIIGFGSTFLEECYQFSPEVKSLQSD 300

Query: 300 IMNAIWSV--KKVVTVLQLRDLQCRIEPKAVISNRSLRTAFANFLTEFLYECSDMDSIPK 357
           IM AI SV  K+VV +  LR+LQ  IEPKA + N+SLR AF N LTEFL+ECSDM+S PK
Sbjct: 301 IMQAILSVEKKEVVPLPVLRELQLLIEPKATVVNKSLRKAFVNLLTEFLFECSDMNSTPK 360

Query: 358 SLSQILDVINKGSDSNMENASLHK-HIEEEVDCILSVGAQTKQIVLDLLPEGEFDQDFTD 416
           SL QILDVINK S+ +  + +L K HIEEEVD ILSV AQT QI+ DLLP+ EFDQ FTD
Sbjct: 361 SLLQILDVINKCSNKSTHDVTLQKEHIEEEVDSILSVSAQTNQIIQDLLPDYEFDQGFTD 420

Query: 417 AYVEQQ-EESDDNSDAEHDD----ENRLH---EDRQSLNGAFSIMDSNYEAESIGDSAPF 468
           AY+E+Q E+SD+ SD + DD    EN LH      + LN      DS+   ++I   +  
Sbjct: 421 AYMEEQSEDSDNESDKDEDDSQCSENSLHCSVTPSECLNS-----DSDKNCDTINLESKM 475

Query: 469 ETHP-------------STPMTVENVSSCPLATCEKLN-------------SDSENLQPK 502
              P             STPM+ +N  S  ++  ++ +             +++      
Sbjct: 476 RNTPYNNQCQEEITEQFSTPMSRKNCDSSAVSLDKEPDENIVKRHEFHESYTEAAPRDKS 535

Query: 503 NFGAENLESMPSKYNACKNQYLAIQDACDKTSMLAYNIAGHMLEEFAITEGRDLNSSSTL 562
           NF  E  + +P+KY+  KNQYLA QDACDKTSMLAYN+ G MLEEFAI E  +L+ S   
Sbjct: 536 NFCEEK-KPIPTKYSGHKNQYLAAQDACDKTSMLAYNLIGRMLEEFAIAEDLNLDLSKRS 594

Query: 563 YLSGDNQIEDREEIKEPSSFGKHTMYSTVARIVKELSPSFPDRSMERLKMLMSL 616
           YL+ D Q ED +E +E SS  K      + R+++EL PSFPD SMERLK+LM L
Sbjct: 595 YLNCDKQSEDIKETEEQSSSRKRKGGPPIVRVIEELIPSFPDSSMERLKILMDL 648