Miyakogusa Predicted Gene
- Lj3g3v3314940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3314940.1 Non Characterized Hit- tr|I1ND38|I1ND38_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,31.58,0.0000000000004,PPR,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR: pentatricopeptid,CUFF.45562.1
(173 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 148 3e-36
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 62 4e-10
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 58 4e-09
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 6e-09
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 57 9e-09
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 57 1e-08
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 57 1e-08
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 1e-08
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 1e-08
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 56 1e-08
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 56 2e-08
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 56 2e-08
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 2e-08
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 55 2e-08
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 3e-08
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 55 3e-08
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 5e-08
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 7e-08
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 7e-08
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 7e-08
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 54 7e-08
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 54 7e-08
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 54 8e-08
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 1e-07
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 54 1e-07
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 54 1e-07
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 53 2e-07
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 53 2e-07
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 53 2e-07
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 2e-07
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 52 2e-07
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 52 2e-07
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 2e-07
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 52 2e-07
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 52 3e-07
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 3e-07
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 51 5e-07
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 51 5e-07
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 51 5e-07
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 51 5e-07
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 51 5e-07
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 5e-07
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 5e-07
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 51 6e-07
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 51 6e-07
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 6e-07
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 7e-07
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 7e-07
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 50 8e-07
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 8e-07
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 50 9e-07
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 50 1e-06
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 1e-06
Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 1e-06
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 50 2e-06
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 49 2e-06
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 49 2e-06
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 2e-06
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 49 2e-06
Medtr1g033840.1 | PPR containing plant-like protein | HC | chr1:... 49 2e-06
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 49 2e-06
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 2e-06
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 2e-06
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 2e-06
Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |... 49 2e-06
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 49 3e-06
Medtr4g021220.1 | PPR containing plant-like protein | HC | chr4:... 49 3e-06
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 49 3e-06
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 3e-06
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 3e-06
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 49 3e-06
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 49 3e-06
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 3e-06
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 48 4e-06
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 48 4e-06
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 48 4e-06
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 48 4e-06
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 48 5e-06
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 48 5e-06
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 48 5e-06
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 48 5e-06
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 48 6e-06
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 48 6e-06
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 48 6e-06
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 47 7e-06
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 47 7e-06
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 47 7e-06
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 47 7e-06
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 47 7e-06
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 47 7e-06
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 47 7e-06
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 47 7e-06
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 47 7e-06
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 47 7e-06
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 47 8e-06
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 47 8e-06
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 47 9e-06
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 47 9e-06
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/147 (53%), Positives = 100/147 (68%), Gaps = 2/147 (1%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
+EV YT+++N YC +GEL KA L DE+ G + + V Y V INGL+KKARTREAK++L
Sbjct: 508 DEVTYTTLMNGYCVEGELSKALDLHDEMMQKGFLPDVVTYSVLINGLNKKARTREAKKLL 567
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
L L Y + + + TLIENC+ NEF S+V LVKGF + L++EA V TM Q N+
Sbjct: 568 LKLFYD--ESVPNDVTYETLIENCSGNEFKSVVGLVKGFCMKGLMDEADRVFETMHQRNF 625
Query: 146 KPDGAVYNLLIVEHCSLRNVDKAYNMY 172
KPDG VYNL+I HC NV KAYNMY
Sbjct: 626 KPDGTVYNLIIHGHCRHGNVRKAYNMY 652
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 17/141 (12%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLS 87
V Y +++N +C DG +A LL E++ G V Y ING+ K A E +LS
Sbjct: 300 VTYNTLVNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAME-ILS 358
Query: 88 LVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKP 147
L+ P NE + LV GF ++ L+NEA VL+ M+ + P
Sbjct: 359 LMRDRGLSP---------------NE-RTYTTLVDGFCRQGLMNEAYKVLSEMVDSGFVP 402
Query: 148 DGAVYNLLIVEHCSLRNVDKA 168
YN L+ C L V++A
Sbjct: 403 SVVTYNALVNGFCCLGRVEEA 423
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 19/158 (12%)
Query: 16 SLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKK 75
SL + G NE YT++++ +C G + +A K+L E+ + G V V Y +NG
Sbjct: 358 SLMRDRGLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCL 417
Query: 76 ARTREAKEMLLSLVYHNC-RDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAA 134
R EA +L +V D S ++L C N EL K FQ +
Sbjct: 418 GRVEEAVGVLKDMVERGLFPDVVSYSTVISLF--CRNG------ELGKAFQMKL------ 463
Query: 135 SVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
M++ PD Y+ LI C R + +A++++
Sbjct: 464 ----EMVEKRILPDAVTYSSLIQGLCCQRKLSEAFDLF 497
>Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr6:29083748-29087017 | 20130731
Length = 593
Score = 61.6 bits (148), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 25 LNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEM 84
LN V Y +VI C D + A L E+ + G V Y I+G + ++A ++
Sbjct: 201 LNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDL 260
Query: 85 LLSLVYHN---------------CRD---PWSTLIFVTLIENCTNNEFMSLVELVKGFQK 126
++ N C+D +F +++ + ++ L+ G+
Sbjct: 261 FNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCL 320
Query: 127 RDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
VN A S+ NTM QG PD YN+LI C ++ VDKA N++
Sbjct: 321 VKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 366
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N + ++I C G++ +A D+L G + V YG I+GL K TR A ++L
Sbjct: 132 NTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLL 191
Query: 86 L---------------SLVYHNCRDPW---STLIFVTLIENCTNNEFMSLVELVKGFQKR 127
+++Y C+D + ++ ++ + ++ L+ GF
Sbjct: 192 QRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVV 251
Query: 128 DLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
+ +A + N ++ N KPDG +N+L+ C R + + ++
Sbjct: 252 GKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVF 296
>Medtr7g007400.1 | PPR containing plant-like protein | HC |
chr7:1471949-1474797 | 20130731
Length = 636
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 9 FSGYGYDSL-------FTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQE 61
FSG GY + + G N +N+T +I C G + +A ++L+E+ G
Sbjct: 190 FSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPN 249
Query: 62 PVIYGVFINGLDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELV 121
+ I+GL KK T +A + L LV P ++ ++
Sbjct: 250 VYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKP----------------NVLTYTAMI 293
Query: 122 KGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
G+ + D +N A +L+ M + P+ Y LI HC N ++AY++
Sbjct: 294 SGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDL 343
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N + YT++I+ YC + +L +A+ LL + G V Y I+G K A + L
Sbjct: 285 NVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYD-L 343
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
++L+ P CT N +V G KR V EA +L Q
Sbjct: 344 MNLMSSEGFSP----------NLCTYNA------IVNGLCKRGRVQEAYKMLEDGFQNGL 387
Query: 146 KPDGAVYNLLIVEHCSLRNVDKAYNMY 172
KPD YN+L+ EHC N+ +A ++
Sbjct: 388 KPDKFTYNILMSEHCKQENIRQALALF 414
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 8 MFSGYGYD----------SLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFG 57
M SGY + S E+G + N YT++I+ +C G +A L++ +++ G
Sbjct: 292 MISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEG 351
Query: 58 DVQEPVIYGVFINGLDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSL 117
Y +NGL K+ R +EA +ML + N P + + E+C
Sbjct: 352 FSPNLCTYNAIVNGLCKRGRVQEAYKMLED-GFQNGLKPDKFTYNILMSEHC-------- 402
Query: 118 VELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHC 160
K++ + +A ++ N ML+ +PD Y LI C
Sbjct: 403 --------KQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFC 437
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 29 NYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLSL 88
YTS+I YC +G L A K L++ G + + YG I+GL K+++ EA+ + S+
Sbjct: 463 TYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSM 522
Query: 89 VYHN---CRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTM 140
+ C TL + E C ++ +S + +++ +K+ + A +++ +
Sbjct: 523 IEKGLVPCEVTRITLAY----EYCKVDDCLSAMVILERLEKKLWIRTATTMVRKL 573
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 31/177 (17%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
+ + TS+I C G++ +A D+L G V YG INGL K +TR A + L
Sbjct: 44 DAITLTSLIKGLCLKGQIHQALHFHDKLAALGFRFNHVSYGTLINGLCKVGQTRAALQ-L 102
Query: 86 LSLVYHNCRDP----------WSTLI--------------------FVTLIENCTNNEFM 115
L V P +S LI F +++ +
Sbjct: 103 LRRVDGKLVQPDVGISPEVVTYSALISGFCILAFCKEGKVKEAKNVFAAMMKKGFKPNVV 162
Query: 116 SLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
+ L+ G+ VN+A S+ N M QG PD YN+LI C ++ D A N++
Sbjct: 163 TYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLF 219
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 19/163 (11%)
Query: 10 SGYGYDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFI 69
SG D + TE+ N V YT+ +N C GE+ +A L +++ V YG F+
Sbjct: 692 SGECLDLMVTEKC-FPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFL 750
Query: 70 NGLDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDL 129
+ L K+ +EA ++ +H + L+ N L++GF K
Sbjct: 751 DSLTKEGNMKEATDL-----HHE--------MLKGLLANTATYNI-----LIRGFCKLGR 792
Query: 130 VNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
+ EA VL+ M + PD Y+ +I EHC +V A ++
Sbjct: 793 LIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELW 835
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 20 EEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTR 79
E G + N V Y ++I+ C G+L KA DE+ N G V Y + I+ L + R
Sbjct: 315 ESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIE 374
Query: 80 EAKEMLLSLV-----------------YHNCRDPWSTL-IFVTLIENCTNNEFMSLVELV 121
EA++M+ + Y C + L +F ++E + L+
Sbjct: 375 EAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLI 434
Query: 122 KGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
F KR+ ++EA ++ PD ++N LI HC N+D+A+ +
Sbjct: 435 DVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQL 484
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 17/149 (11%)
Query: 20 EEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTR 79
+EG L + + + ++I+ +C +G + +A +LL E+ N V + V + + G ++ +
Sbjct: 455 KEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVE 514
Query: 80 EAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNT 139
EAK++L + E + +S L+ G+ KR + +A V +
Sbjct: 515 EAKKLLDEMK-----------------ERGIKPDHISYNTLISGYSKRGDMKDALEVFDE 557
Query: 140 MLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
ML + P YN LI + + D A
Sbjct: 558 MLSLGFDPTLLTYNALIQGYSKIGEADHA 586
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 17/151 (11%)
Query: 22 GGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREA 81
G + + V YT +IN YC + ++ A K+ +E+ G V + V Y +NGL + +A
Sbjct: 408 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 467
Query: 82 KEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTML 141
E+ F ++E +F +L L+ G+ K + +A S+ TM
Sbjct: 468 DEL-----------------FKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMT 510
Query: 142 QGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
+ KPD YN L+ C + ++KA ++
Sbjct: 511 LRSLKPDVVTYNTLMDGFCKVGEMEKAKELW 541
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 15 DSLFTE--EGGLLNEV-NYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFING 71
D LF E E G+ + T++I+ YC DG + KA L + +T + V Y ++G
Sbjct: 468 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 527
Query: 72 LDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIEN--CT------------------- 110
K +AKE+ ++ R+ + + I +++ N C+
Sbjct: 528 FCKVGEMEKAKELWYDMI---SREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGI 584
Query: 111 NNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAY 169
++ ++KG+ + +++A LNTM+ PD YN LI N D+A+
Sbjct: 585 KPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAF 643
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 18/176 (10%)
Query: 14 YDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLD 73
Y S E+G + V Y +++NAYC G + +A L+D + G Y INGL
Sbjct: 260 YLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLC 319
Query: 74 KKARTREAKEMLL---------------SLVYHNCR--DPW-STLIFVTLIENCTNNEFM 115
K+ AK +L ++ +CR D W + +F +++ + +
Sbjct: 320 KEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLI 379
Query: 116 SLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
S +V F + + A + M PD +Y +LI +C +V A M
Sbjct: 380 SFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKM 435
>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29072402-29074378 | 20130731
Length = 362
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V Y ++I++ C + +A L E+ + G + V Y I+G + ++A ++
Sbjct: 41 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLF 100
Query: 86 LSLVYHN---------------CRD---PWSTLIFVTLIENCTNNEFMSLVELVKGFQKR 127
++ N C+D +F +++ ++ L+ G+
Sbjct: 101 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 160
Query: 128 DLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
VN+A S+ NTM QG PD YN++I C ++ VD+A N++
Sbjct: 161 KQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLF 205
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 9/133 (6%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V YTS+I+ C G++ A KL+DE+ + G + + Y ++ L K + +A +L
Sbjct: 216 NVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL 275
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
L +D +F L N + + +++GF + L NEA ++L+ M
Sbjct: 276 TKL-----KDQ----VFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGR 326
Query: 146 KPDGAVYNLLIVE 158
PD Y ++I+
Sbjct: 327 IPDAKTYEIIILS 339
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V Y+++I+ C D + A L E+ + G V Y I+G + ++A ++
Sbjct: 223 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLF 282
Query: 86 LSLVYHN---------------CRD---PWSTLIFVTLIENCTNNEFMSLVELVKGFQKR 127
++ N C+D +F +++ ++ L+ G+
Sbjct: 283 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 342
Query: 128 DLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
VN+A S+L TM Q PD YN+LI C ++ VD+A N++
Sbjct: 343 KEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF 387
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V Y ++I++ C + +A L E+ + G + V Y I+G + ++A ++
Sbjct: 177 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLF 236
Query: 86 LSLVYHN---------------CRD---PWSTLIFVTLIENCTNNEFMSLVELVKGFQKR 127
++ N C+D +F +++ ++ L+ G+
Sbjct: 237 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 296
Query: 128 DLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
VN+A S+ NTM QG PD YN++I C ++ VD+A N++
Sbjct: 297 KQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLF 341
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 9/133 (6%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V YTS+I+ C G++ A KL+DE+ + G + + Y ++ L K + +A +L
Sbjct: 352 NVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL 411
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
L +D +F L N + + +++GF + L NEA ++L+ M
Sbjct: 412 TKL-----KDQ----VFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGR 462
Query: 146 KPDGAVYNLLIVE 158
PD Y ++I+
Sbjct: 463 IPDAKTYEIIILS 475
>Medtr7g405940.1 | PPR containing plant-like protein | HC |
chr7:313415-311451 | 20130731
Length = 654
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 16/146 (10%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N +N+T +I C G + +A ++L+E+ G + I+GL KK T +A +
Sbjct: 232 NLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLF 291
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
L LV P ++ ++ G+ + D +N A +L+ M +
Sbjct: 292 LKLVRSENHKP----------------NVLTYTAMISGYCREDKLNRAEMLLSRMKEQGL 335
Query: 146 KPDGAVYNLLIVEHCSLRNVDKAYNM 171
P+ Y LI HC N ++AY++
Sbjct: 336 VPNTNTYTTLIDGHCKAGNFERAYDL 361
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N + YT++I+ YC + +L +A+ LL + G V Y I+G K A + L
Sbjct: 303 NVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYD-L 361
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
++L+ P CT N +V G KR V EA +L Q
Sbjct: 362 MNLMSSEGFSP----------NVCTYNA------IVNGLCKRGRVQEAYKMLEDGFQNGL 405
Query: 146 KPDGAVYNLLIVEHCSLRNVDKAYNMY 172
KPD YN+L+ EHC N+ +A ++
Sbjct: 406 KPDRFTYNILMSEHCKQANIRQALVLF 432
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 29 NYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLSL 88
YTS+I YC +G L A K L++ G + + YG I+GL K+++ EA+ + S+
Sbjct: 481 TYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKLDEARGLYDSM 540
Query: 89 VYHN---CRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTM 140
+ C TL + E C ++ +S + +++ +K+ + A +++ +
Sbjct: 541 IEKGLVPCEVTRITLAY----EYCKVDDCLSAMVILERLEKKLWIRTATTLVRKL 591
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 23/158 (14%)
Query: 18 FTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKAR 77
F G + NE YT VI A C G+ ++ DE+ G + Y FI GL
Sbjct: 216 FKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGL----- 270
Query: 78 TREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFM---SLVELVKGFQKRDLVNEAA 134
C++ S L + L + T N + + +++GF ++EA
Sbjct: 271 ---------------CKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAE 315
Query: 135 SVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
SV M + PD VY L+ +C+ RN DKA +Y
Sbjct: 316 SVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVY 353
>Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:5845943-5843116 | 20130731
Length = 790
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 29/186 (15%)
Query: 7 YMFSGYGY--DSLF-----TEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDV 59
Y S +G+ D+L E+G +++V Y++V++++C + + KA L+ ++ + G
Sbjct: 381 YALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCN 440
Query: 60 QEPVIYGVFINGLDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIEN-CTNNEFMSLV 118
+ V Y I+G + + EAK+ML + H C+ +T+ + L+ C N + +
Sbjct: 441 PDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKP--NTVTYTVLLNGLCHNGKSLEAR 498
Query: 119 ELV-------------------KGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEH 159
E++ G ++ ++EA + M++ + P+ NLLI
Sbjct: 499 EMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSL 558
Query: 160 CSLRNV 165
C +NV
Sbjct: 559 CRNQNV 564
>Medtr1g112240.1 | PPR containing plant-like protein | HC |
chr1:50767348-50763755 | 20130731
Length = 559
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 20/150 (13%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
NE Y +I AYC G+L A+ + E+ N+G V+Y +INGL K +A+E+
Sbjct: 171 NEDTYALLIKAYCMSGKLQSAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNFDKAEEIF 230
Query: 86 LSLVYHNCR---DPWSTLIFV----------------TLIENCTNNEFMSLVELVKGFQK 126
+ C+ + ++ LI + L + C N + LV F +
Sbjct: 231 KRMKRDGCKLSLESYTMLINLYGKAGKSYMALKVFDEMLSQKCKPN-ICTYTALVNAFAR 289
Query: 127 RDLVNEAASVLNTMLQGNYKPDGAVYNLLI 156
L +A + M + +PD YN L+
Sbjct: 290 EGLCEKAEEIFEQMQEAGLEPDVYAYNALM 319
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLS 87
V Y+++I+ +C G+L A L +++ + + + + ++G K+ R +EAK +L
Sbjct: 232 VTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAM 291
Query: 88 LVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKP 147
++ + + ++ L+ G+ VN+A S+ NTM QG
Sbjct: 292 MMKQGIKP-----------------DVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTA 334
Query: 148 DGAVYNLLIVEHCSLRNVDKAYNMY 172
+ YN++I C ++ VD+A N++
Sbjct: 335 NVQSYNIMINGFCKIKKVDEAMNLF 359
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 22/171 (12%)
Query: 22 GGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEP--VIYGVFINGLDKKARTR 79
G LN+V Y ++IN C G+ A +LL + G + +P V+Y I+ + K
Sbjct: 156 GFHLNKVCYGTLINGLCKVGQTSAALQLLRRVD--GKLVQPNVVMYNTIIDSMCKVKLVN 213
Query: 80 EAKEMLLSLVYHNCRD---PWSTLI---------------FVTLIENCTNNEFMSLVELV 121
EA ++ +V +S LI F +I N + + LV
Sbjct: 214 EAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILV 273
Query: 122 KGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
GF K V EA +VL M++ KPD Y L+ +C ++ V+KA +++
Sbjct: 274 DGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIF 324
>Medtr1g035250.1 | PPR containing plant-like protein | HC |
chr1:12584008-12586490 | 20130731
Length = 662
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 31/169 (18%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVI--YGVFINGLDKKARTREAKE 83
++V+YT+VI++ C G++ KA +L + EPV+ Y I+G+ K+ R +EA +
Sbjct: 213 DDVSYTTVISSMCKLGDVDKARELAMKF-------EPVVPVYNALIHGVCKECRFKEAFD 265
Query: 84 MLLSLVYHNCRDP----WSTLIFV----------------TLIENCTNNEFMSLVELVKG 123
++ +V DP +ST+I + C N + L+KG
Sbjct: 266 LMNEMVDRGV-DPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPN-VQTFTSLIKG 323
Query: 124 FQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
F R V +A + N M++ P+ YN LI CS N+D+A +++
Sbjct: 324 FFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVW 372
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 21/147 (14%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIY--GVFINGLDKKARTREAKEML 85
V Y+S+I+ +C G+L A L + + + D P +Y + I+G K+ + REAK +L
Sbjct: 234 VTYSSLISGFCVVGKLKYAVDLFNRMIS--DNINPNVYTFSILIDGFCKEGKVREAKNVL 291
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
++ N + ++ T N M LVK VN+A S+ N M Q
Sbjct: 292 AVMMKKNVK-----------LDVVTYNSLMDGYCLVKQ------VNKAKSLFNVMAQRGV 334
Query: 146 KPDGAVYNLLIVEHCSLRNVDKAYNMY 172
PD Y+++I C ++ VD+A ++
Sbjct: 335 TPDVWSYSIMINGFCKIKMVDEAMKLF 361
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 12 YGYDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEP--VIYGVFI 69
Y +D + +G L++V+Y ++IN C GE A +LL + G + P V+Y I
Sbjct: 149 YFHDKV-VAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVD--GKLVRPNVVMYSTII 205
Query: 70 NGLDKKARTREAKEMLLSLVYHNCRD---PWSTLI---------------FVTLIENCTN 111
+ + K +A ++ +V +S+LI F +I + N
Sbjct: 206 DSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNIN 265
Query: 112 NEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
+ L+ GF K V EA +VL M++ N K D YN L+ +C ++ V+KA ++
Sbjct: 266 PNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSL 325
Query: 172 Y 172
+
Sbjct: 326 F 326
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 21/146 (14%)
Query: 29 NYTSVINAYCADGELVKADKLLDELTNFGDVQEP--VIYGVFINGLDKKARTREAKEMLL 86
+Y S+I+ C G + KLLDE+ G Q P V Y + I+ L K+ R EA +L
Sbjct: 372 SYNSLIDGLCNSGRISHVKKLLDEM--HGSAQPPDVVTYNILIDALCKEGRILEALGVL- 428
Query: 87 SLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYK 146
V +++ ++ ++ G+ R+ VN A + N M++ +
Sbjct: 429 ----------------VMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Query: 147 PDGAVYNLLIVEHCSLRNVDKAYNMY 172
PD YN+LI +C VD+A ++
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLF 498
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 7 YMFSGYGYDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYG 66
++ G S E G LL+ V Y S+I+ C+ G + +LL ++ + +
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269
Query: 67 VFINGLDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQK 126
+ I+ L K+ R EA+ +L+++ P + ++ L++G+
Sbjct: 270 ILIDALCKEGRILEAQG-VLAMMSKRGEKP----------------DIVTYNALMEGYCS 312
Query: 127 RDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
R+ V+EA + N M++ +PD YN+LI +C + VD+A ++
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358
>Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:28329250-28330881 | 20130731
Length = 543
Score = 53.9 bits (128), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 30 YTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLSLV 89
Y ++I+ C D ++ A +L E+ G + Y I+GL + A E
Sbjct: 197 YKTIIDCLCKDSKVETALELYTEMIESGIFPDVFTYTTLIHGLCISDNFKAAFEF----- 251
Query: 90 YHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDG 149
F ++ N N + L+ KR V E+ ++LNTM++ +PD
Sbjct: 252 ------------FKEMVSNEINPTVYTYSALMAYLCKRKRVRESKALLNTMIKDGLEPDL 299
Query: 150 AVYNLLIVEHCSLRNVDKAYNMY 172
A++N L+ HCSL + KA ++
Sbjct: 300 AIFNTLMEGHCSLHQMQKAKRIF 322
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 22/172 (12%)
Query: 21 EGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEP--VIYGVFINGLDKKART 78
+G L++V+Y ++IN C G + A +LL + G + +P V+Y + I+ + K
Sbjct: 160 QGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD--GKLVQPNAVMYNMIIDNMCKAKLV 217
Query: 79 REAKEMLLSLVYHN-CRD--PWSTLI---------------FVTLIENCTNNEFMSLVEL 120
+A ++ +V C D ++ LI F + + N + L
Sbjct: 218 NDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNIL 277
Query: 121 VKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
V GF K VN+A VL M++ + KPD YN L+ +CS+ V+KA +++
Sbjct: 278 VDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIF 329
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 22/172 (12%)
Query: 21 EGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEP--VIYGVFINGLDKKART 78
+G L++V+Y ++IN C G + A +LL + G + +P V+Y + I+ + K
Sbjct: 160 QGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD--GKLVQPNAVMYNMIIDNMCKAKLV 217
Query: 79 REAKEMLLSLVYHN-CRD--PWSTLI---------------FVTLIENCTNNEFMSLVEL 120
+A ++ +V C D ++ LI F + + N + L
Sbjct: 218 NDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNIL 277
Query: 121 VKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
V GF K VN+A VL M++ + KPD YN L+ +CS+ V+KA +++
Sbjct: 278 VDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIF 329
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 21/146 (14%)
Query: 29 NYTSVINAYCADGELVKADKLLDELTNFGDVQEP--VIYGVFINGLDKKARTREAKEMLL 86
+Y S+I+ C G + KLLDE+ G Q P V Y + I+ L K+ R EA +L
Sbjct: 372 SYNSLIDGLCNSGRISHVKKLLDEM--HGSAQPPDVVTYNILIDALCKEGRILEALGVL- 428
Query: 87 SLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYK 146
V +++ ++ ++ G+ R+ VN A + N M++ +
Sbjct: 429 ----------------VMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Query: 147 PDGAVYNLLIVEHCSLRNVDKAYNMY 172
PD YN+LI +C VD+A ++
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLF 498
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 7 YMFSGYGYDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYG 66
++ G S E G LL+ V Y S+I+ C+ G + +LL ++ + +
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269
Query: 67 VFINGLDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQK 126
+ I+ L K+ R EA+ +L+++ P + ++ L++G+
Sbjct: 270 ILIDALCKEGRILEAQG-VLAMMSKRGEKP----------------DIVTYNALMEGYCS 312
Query: 127 RDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
R+ V+EA + N M++ +PD YN+LI +C + VD+A ++
Sbjct: 313 RENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 33/183 (18%)
Query: 20 EEG-GLLNEVN----------YTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVF 68
EEG GLL E+ Y+++I+ +C+ G++ + +L +E+ V Y
Sbjct: 216 EEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCL 275
Query: 69 INGLDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMS--------LVE- 119
+N L KK + +EA +ML ++ C+ + + L + + N S +V+
Sbjct: 276 MNALCKKQKWKEAAQMLDTMT--GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKR 333
Query: 120 -----------LVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
++ G K V++A +L TM + KPD Y+ L+ C + +D+A
Sbjct: 334 GEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEA 393
Query: 169 YNM 171
++
Sbjct: 394 VDL 396
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V Y+ ++NA C + +A ++LD +T + V Y V +GL K R +A ++L
Sbjct: 268 NVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVL 327
Query: 86 LSLVYHN---------------CRDPW---STLIFVTLIENCTNNEFMSLVELVKGFQKR 127
+V C++ + I T+ + + ++ LVKG
Sbjct: 328 DLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGV 387
Query: 128 DLVNEAASVLNTMLQGNY--KPDGAVYNLLIVEHCSLRNVDKAYNMY 172
++EA +LN ++ + KPD +NL+I E C R + A +Y
Sbjct: 388 GKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVY 434
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 22/181 (12%)
Query: 11 GYGYDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFIN 70
+G L + G LN N+ ++ +C G+ KA L + + + V Y IN
Sbjct: 113 AFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVIN 172
Query: 71 GLDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIEN-CTNN---EFMSLVE------- 119
GL K R EAKE+ + C+ +++ F LI+ C N E L+E
Sbjct: 173 GLCKGKRLVEAKELFKEMKGGECKP--NSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGL 230
Query: 120 ---------LVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYN 170
L+ GF + + + N ML+ N P+ Y+ L+ C + +A
Sbjct: 231 EGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQ 290
Query: 171 M 171
M
Sbjct: 291 M 291
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V Y ++I++ C + +A L E+ + G + V Y I+G + ++A ++
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF 283
Query: 86 LSLVYHN---------------CRD---PWSTLIFVTLIENCTNNEFMSLVELVKGFQKR 127
++ N C+D +F +++ F++ L+ G+
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343
Query: 128 DLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
VN+A S+ NTM QG PD Y+++I C ++ D+A N++
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLF 388
>Medtr1g068960.1 | PPR containing plant-like protein | HC |
chr1:29509792-29507424 | 20130731
Length = 727
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 17/143 (11%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
+E Y+ +I++ C + L +A LL E+ + G + V+Y I+GL K R +A+E+
Sbjct: 411 DEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIF 470
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
+ S++ + TLI+ G K V EA+ +++ M+
Sbjct: 471 DQMELLGVS--RSSVTYNTLID---------------GLCKNKRVEEASQLMDQMIMEGL 513
Query: 146 KPDGAVYNLLIVEHCSLRNVDKA 168
KPD YN L+ C + +++KA
Sbjct: 514 KPDKFTYNSLLTYFCRVGDIEKA 536
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
+E+ +T+++ + +G+L A K+ ++ +G + V V +NG K+ R EA +
Sbjct: 201 DEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFV 260
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
L + E + + ++ LV GF + VN+A +++ M++ +
Sbjct: 261 LEVS-----------------EEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGF 303
Query: 146 KPDGAVYNLLIVEHCSLRNVDKA 168
PD YN LI C L +KA
Sbjct: 304 DPDVYTYNSLISGMCKLGEFEKA 326
>Medtr2g036080.1 | PPR containing plant-like protein | HC |
chr2:15308501-15315184 | 20130731
Length = 1388
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 25/156 (16%)
Query: 20 EEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTR 79
E G V Y +++N YC G A +L+D + + G + Y V I+ L +K+R+
Sbjct: 207 ETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSA 266
Query: 80 EA----KEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAAS 135
+ + M ++VY N T N L+ G K + A
Sbjct: 267 KGYLILRRMRKNMVYPN---------------EITYN------TLINGLVKEGKIGVATK 305
Query: 136 VLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
V M N P+ YN LI HCS N+++A +
Sbjct: 306 VFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRL 341
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 11 GYGYDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFIN 70
Y + +EG L NEV+YT++I+ +C G++ +A +L ++ G + Y V +
Sbjct: 244 AYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVA 303
Query: 71 GLDKKARTREAKEMLLSLVYHNCRDP----WSTLI---------------FVTLIENCTN 111
+ + EA + +V N +P ++ LI T++E
Sbjct: 304 AFCEVGKETEALKFFEEMV-ENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLV 362
Query: 112 NEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
+ + L+ G+ KR ++ +A VL++M P+ YN LI C +++D+A
Sbjct: 363 SSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRA 419
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 20 EEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTR 79
E+G + YT ++ A+C G+ +A K +E+ G Y V I+ K +
Sbjct: 288 EDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMD 347
Query: 80 EAKEMLLSLVYHN---------------CR-----DPWSTLIFVTLIENCTNNEFMSLVE 119
E EML +++ C+ D L + L + C N+ + E
Sbjct: 348 EGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSR--TYNE 405
Query: 120 LVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
L+ GF ++ ++ A ++LN M + P+ YN LI C R VD A+ ++
Sbjct: 406 LICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLH 458
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 20/159 (12%)
Query: 17 LFTE---EGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLD 73
LF+E +G + V Y+++I+ +C G+L A L +++ + + + +N
Sbjct: 247 LFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFC 306
Query: 74 KKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEA 133
K + +E K +F +++ F++ L+ G+ VN+A
Sbjct: 307 KDGKMKEGKT-----------------VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349
Query: 134 ASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
S+ NTM QG PD Y+++I C ++ D+A N++
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLF 388
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 22 GGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREA 81
G + + + +T++I C G++ +A D++ G + + YG I+GL K TR A
Sbjct: 150 GYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAA 209
Query: 82 KEMLLSLVYHNCRDP----WSTLI---------------FVTLIENCTNNEFMSLVELVK 122
+ LL V N P ++T+I F +I + + ++ L+
Sbjct: 210 LD-LLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALIS 268
Query: 123 GFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHC 160
GF +N+A + N M+ N KPD +N+L+ C
Sbjct: 269 GFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFC 306
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 21 EGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTRE 80
+G + + Y ++++ YC +L A +L++ + + G + + Y +NGL K A++ E
Sbjct: 455 KGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEE 514
Query: 81 AKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTM 140
E+ ++ C + + + T+IE+ N++ VNEA +L M
Sbjct: 515 VMEIFKAMTEKGCAP--NIITYNTIIESLCNSK---------------KVNEAVDLLGEM 557
Query: 141 LQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
PD + LI C + ++D AY ++
Sbjct: 558 KSKGLTPDVVSFGTLITGFCKVGDLDGAYGLF 589
>Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28827992-28825334 | 20130731
Length = 539
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 31 TSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLSL-- 88
T+++ C G +++A LL E + G + V YG INGL K +TR+A +M +
Sbjct: 144 TTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKK 203
Query: 89 --VYHN-----------CRDPW---STLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNE 132
VY N C+ + + ++EN + S ++ GF
Sbjct: 204 IRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQA 263
Query: 133 AASVLNTM-LQGNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
A +L+ M ++G PD +N+LI C L V +AYN+
Sbjct: 264 AVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNV 303
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 20 EEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPV-IYGVFINGLDKKART 78
E G L+ +Y S+I+ +C+ G A KLLDE+ G V V + + I+GL K R
Sbjct: 238 ENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRV 297
Query: 79 REAKEMLLSLVYHNCRD---PWSTL---------------IFVTLIENCTNNEFMSLVEL 120
EA ++ ++ + ++ L +F ++E +S L
Sbjct: 298 SEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTL 357
Query: 121 VKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLI 156
+ G+ K +V+EA +L M N PD YN L+
Sbjct: 358 INGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLL 393
>Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196306-25191240 | 20130731
Length = 529
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 11 GYGYDSL--FTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVF 68
G+ + L + G N + T+V+ C +GE+ KA D + G + + V YG
Sbjct: 109 GFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTL 168
Query: 69 INGLDKKARTREAKEML---------LSLVYHN------CRDPWSTL---IFVTLIENCT 110
INGL K R+ +A ++L ++V +N C+D + +++ +++
Sbjct: 169 INGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGI 228
Query: 111 NNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYN 170
+ + ++ L++GF + E ++ M+ N P+ +N+LI C + +A
Sbjct: 229 DPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQG 288
Query: 171 MY 172
M+
Sbjct: 289 MF 290
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 14 YDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLD 73
+D++F E G L + +YT +I YC + +A L +E+ V + V+Y I+GL
Sbjct: 325 FDTVF-ERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLC 383
Query: 74 KKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIEN-CTNNEFMSLVELVK---------- 122
K R A E+ ++ +N P + + + LI+ C + +EL K
Sbjct: 384 KSGRISYAWELFSTI--NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPT 441
Query: 123 ---------GFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
G+ K + EA ++L+ M N PD YN L C + A+ ++
Sbjct: 442 VLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELF 500
>Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196280-25191240 | 20130731
Length = 529
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 11 GYGYDSL--FTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVF 68
G+ + L + G N + T+V+ C +GE+ KA D + G + + V YG
Sbjct: 109 GFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTL 168
Query: 69 INGLDKKARTREAKEML---------LSLVYHN------CRDPWSTL---IFVTLIENCT 110
INGL K R+ +A ++L ++V +N C+D + +++ +++
Sbjct: 169 INGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGI 228
Query: 111 NNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYN 170
+ + ++ L++GF + E ++ M+ N P+ +N+LI C + +A
Sbjct: 229 DPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQG 288
Query: 171 MY 172
M+
Sbjct: 289 MF 290
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 14 YDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLD 73
+D++F E G L + +YT +I YC + +A L +E+ V + V+Y I+GL
Sbjct: 325 FDTVF-ERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLC 383
Query: 74 KKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIEN-CTNNEFMSLVELVK---------- 122
K R A E+ ++ +N P + + + LI+ C + +EL K
Sbjct: 384 KSGRISYAWELFSTI--NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPT 441
Query: 123 ---------GFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
G+ K + EA ++L+ M N PD YN L C + A+ ++
Sbjct: 442 VLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELF 500
>Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25194945-25193304 | 20130731
Length = 513
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 7 YMFSGYGYDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYG 66
+ FS G + + G N + T+V+ C +GE+ KA D + G + + V YG
Sbjct: 94 FAFSVLG---IVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYG 150
Query: 67 VFINGLDKKARTREAKEML---------LSLVYHN------CRDPWSTL---IFVTLIEN 108
INGL K R+ +A ++L ++V +N C+D + +++ +++
Sbjct: 151 TLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDM 210
Query: 109 CTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
+ + ++ L++GF + E ++ M+ N P+ +N+LI C + +A
Sbjct: 211 GIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEA 270
Query: 169 YNMY 172
M+
Sbjct: 271 QGMF 274
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 14 YDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLD 73
+D++F E G L + +YT +I YC + +A L +E+ V + V+Y I+GL
Sbjct: 309 FDTVF-ERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLC 367
Query: 74 KKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIEN-CTNNEFMSLVELVK---------- 122
K R A E+ ++ +N P + + + LI+ C + +EL K
Sbjct: 368 KSGRISYAWELFSTI--NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPT 425
Query: 123 ---------GFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
G+ K + EA ++L+ M N PD YN L C + A+ ++
Sbjct: 426 VLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELF 484
>Medtr2g041700.1 | PPR containing plant-like protein | HC |
chr2:18319616-18321262 | 20130731
Length = 548
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLS 87
V +TS+IN Y G++ A ++ +E+ + + V +NG K R EA+++L
Sbjct: 355 VTFTSLINGYFVVGQVKPALEMWNEMNSRKVAASLYTFSVLVNGFCKNNRLHEARDILTR 414
Query: 88 LVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKP 147
L S ++ + + N ++ G+ K V+EA +L M + KP
Sbjct: 415 L-------KQSDVVPQSFVYN----------PVIDGYCKSGNVDEANKILAEMEENRCKP 457
Query: 148 DGAVYNLLIVEHCSLRNVDKAYNMY 172
D Y +LI+ HCS + +A ++
Sbjct: 458 DKLTYTILIIGHCSKGRMAEAIGIF 482
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 22/161 (13%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLS 87
V+YT++I+ YC + +A L DE+ G + + I+G K + M
Sbjct: 285 VSYTTIISGYCKLSRMKEASSLFDEMIRSGTMPNAFTFNALIDGFVKLGDMASSLAMYHK 344
Query: 88 LVYHNCRDPWSTLIFVTLIE---------------NCTNNE-----FMSLVELVKGFQKR 127
+++ C +P + F +LI N N+ + LV GF K
Sbjct: 345 MLFRGC-NP-DVVTFTSLINGYFVVGQVKPALEMWNEMNSRKVAASLYTFSVLVNGFCKN 402
Query: 128 DLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
+ ++EA +L + Q + P VYN +I +C NVD+A
Sbjct: 403 NRLHEARDILTRLKQSDVVPQSFVYNPVIDGYCKSGNVDEA 443
>Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0654:2086-773 | 20130731
Length = 412
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 6 DYMFSGYGYDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIY 65
D+ FS +G + G + + + ++I C +G++ +A D + + G + V Y
Sbjct: 2 DFAFSLFGK---ILKVGFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSY 58
Query: 66 GVFINGLDKKARTREAKEMLL---------------SLVYHNCRDPWST---LIFVTLIE 107
G INGL K +T EA ++L +++ C+D T +++ +I
Sbjct: 59 GTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEAYVLYSEMIT 118
Query: 108 NCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDK 167
+ + ++ L+ GF + EA + + M+ N PD +N+L+ C N +
Sbjct: 119 KRISPDVVTFSALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYTFNILVDAFCKEGNTKE 178
Query: 168 AYNM 171
A N+
Sbjct: 179 AKNV 182
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 25 LNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEP--VIYGVFINGLDKKARTREAK 82
L++V+Y ++IN C GE + A +LL G +P V+Y I+G+ K +A
Sbjct: 171 LDQVSYGTLINGLCKVGETIAALELLRRFD--GKFVQPDVVMYNTIIDGMCKDKHVNDAF 228
Query: 83 EMLLSLVYHNCRD---PWSTLIFVTLIENCTNNEF----MSLVELVKGFQKRDLVNEAAS 135
++ +V +S LI I + F + LV GF K V EA +
Sbjct: 229 DLYSEMVAKRISPNVVTYSALISGFCIVGKLKDAFDFFNKMIFILVDGFCKEGRVKEAKN 288
Query: 136 VLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
VL M++ KPD Y+ L+ +C + V+KA +++
Sbjct: 289 VLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIF 325
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V Y S+++A C ++ KA LL + + G Y + I+GL K R ++A+
Sbjct: 406 NIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTILIDGLCKGGRLKDARN-- 463
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
IF L+ N + +++GF L++E+ ++L+ M +
Sbjct: 464 ---------------IFEDLLVKGYNITVNTYTVMIQGFCSHGLLDESLALLSKMEENGC 508
Query: 146 KPDGAVYNLLIVEHCSLRNVDK 167
PD Y ++I CSL + DK
Sbjct: 509 IPDAVTYEIII---CSLFDKDK 527
>Medtr8g071970.1 | PPR containing plant-like protein | HC |
chr8:30370460-30375133 | 20130731
Length = 823
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 20/150 (13%)
Query: 21 EGGLLNEV-NYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTR 79
GG+L +V Y + INAYC G++ +A L ++ G + V Y I+GL K R
Sbjct: 238 RGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLE 297
Query: 80 EAKEMLLSLVYHNCRDPWSTLIFV-TLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLN 138
EA L+F ++EN N ++ LV G K + +EA SVL
Sbjct: 298 EA------------------LMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLV 339
Query: 139 TMLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
M + P+ V+N LI + N+D A
Sbjct: 340 EMYSKGFSPNEFVFNALIDGYSRKGNMDDA 369
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 17/153 (11%)
Query: 20 EEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTR 79
++G + + Y+ +I+ +C + KA LL+E+ G P Y IN L K R
Sbjct: 400 KDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYE 459
Query: 80 EAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNT 139
A E+ F L ENC ++ ++K F K NEA + N
Sbjct: 460 AANEL-----------------FQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNE 502
Query: 140 MLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
M + PD YN LI +D+A++++
Sbjct: 503 MKKLGCIPDVYAYNALITGMVRADMMDEAFSLF 535
>Medtr4g062480.2 | PPR containing plant-like protein | HC |
chr4:23218652-23215388 | 20130731
Length = 457
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 17/144 (11%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLS 87
V+Y S+I G+L KA +L++++ G V Y + + GL + EAK+++
Sbjct: 218 VSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFD 277
Query: 88 LVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKP 147
+ Y C+ + ++ L+ KR ++EA + M + KP
Sbjct: 278 MAYRGCKP-----------------QLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKP 320
Query: 148 DGAVYNLLIVEHCSLRNVDKAYNM 171
D YN+ + C +AY M
Sbjct: 321 DVVTYNVFVNYLCKEGKTAEAYKM 344
>Medtr4g062480.3 | PPR containing plant-like protein | HC |
chr4:23218661-23215388 | 20130731
Length = 457
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 17/144 (11%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLS 87
V+Y S+I G+L KA +L++++ G V Y + + GL + EAK+++
Sbjct: 218 VSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFD 277
Query: 88 LVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKP 147
+ Y C+ + ++ L+ KR ++EA + M + KP
Sbjct: 278 MAYRGCKP-----------------QLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKP 320
Query: 148 DGAVYNLLIVEHCSLRNVDKAYNM 171
D YN+ + C +AY M
Sbjct: 321 DVVTYNVFVNYLCKEGKTAEAYKM 344
>Medtr4g062480.1 | PPR containing plant-like protein | HC |
chr4:23218638-23215388 | 20130731
Length = 457
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 17/144 (11%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLS 87
V+Y S+I G+L KA +L++++ G V Y + + GL + EAK+++
Sbjct: 218 VSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFD 277
Query: 88 LVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKP 147
+ Y C+ + ++ L+ KR ++EA + M + KP
Sbjct: 278 MAYRGCKP-----------------QLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKP 320
Query: 148 DGAVYNLLIVEHCSLRNVDKAYNM 171
D YN+ + C +AY M
Sbjct: 321 DVVTYNVFVNYLCKEGKTAEAYKM 344
>Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29904711-29905680 | 20130731
Length = 276
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 22 GGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEP--VIYGVFINGLDKKARTR 79
G +L++ +Y ++IN C GE A +LL + G + +P V Y I+ + K
Sbjct: 75 GFMLDQFSYGTLINDLCKAGETKAALELLRRVD--GKLVQPDVVKYIAIIDSMCKDKHVN 132
Query: 80 EAKEMLLSLVYHNCRDPWSTLIFVTLIEN-CT---NNEFMSLVELVKGFQKRDLVNEAAS 135
A ++ +V R L + LI + C F++ L+ G+ VN+A S
Sbjct: 133 HAFDLYSKMVSK--RISPDILTYNALISDFCIVGFKPNFVTYNSLMDGYCLLKEVNKAKS 190
Query: 136 VLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
+ NTM Q P YN+LI C ++ VD+A N++
Sbjct: 191 IFNTMAQEGVNPAIQSYNILINGFCKIKKVDEAINLF 227
>Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35125926-35130110 | 20130731
Length = 608
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 17 LFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKA 76
L G L + V YTS+I+ +C + KA LLDE+ G + V + I G +
Sbjct: 362 LMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVG 421
Query: 77 RTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASV 136
R AKE+ L++ + V ++ C ++ G K L++EA S+
Sbjct: 422 RPLAAKELFLNMHKYG---------QVPNLQTCA--------IILDGLCKSQLLSEALSL 464
Query: 137 LNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
+ M + N + +Y++++ CS ++ A ++
Sbjct: 465 FHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELF 500
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 18 FTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKAR 77
TEEG + YT+++ A LL ++ G + +++ IN +
Sbjct: 69 LTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGK 128
Query: 78 TREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVL 137
EA ++ + C+ ST F TLI KGF +EA +L
Sbjct: 129 VHEAMKIFRKMKECGCKPTTST--FNTLI---------------KGFGIVGRPHEAMKLL 171
Query: 138 NTMLQ-GNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
M+Q GN KP+ YN+LI C+ +++A+N+
Sbjct: 172 EMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNV 206
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 18 FTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKAR 77
TEEG + YT+++ A LL ++ G + +++ IN +
Sbjct: 69 LTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGK 128
Query: 78 TREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVL 137
EA ++ + C+ ST F TLI KGF +EA +L
Sbjct: 129 VHEAMKIFRKMKECGCKPTTST--FNTLI---------------KGFGIVGRPHEAMKLL 171
Query: 138 NTMLQ-GNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
M+Q GN KP+ YN+LI C+ +++A+N+
Sbjct: 172 EMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNV 206
>Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29897140-29898259 | 20130731
Length = 346
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 78/207 (37%), Gaps = 60/207 (28%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
+ + T+ I C G++ +A D++ G + V YG INGL K T+EA E+L
Sbjct: 44 DTITLTTFIKVLCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLGKVGETKEALELL 103
Query: 86 ---------LSLVYHN------CRDP-----------------------WSTLI------ 101
L+ V +N C+D +S LI
Sbjct: 104 RRVDGKLVQLNAVMYNTVIDGMCKDKHVNDAFDLYSEMVAKRIYPGVVTYSALIIGFCIV 163
Query: 102 ----------------FVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
F +++ + L+ G+ VN+A S+ NTM QG
Sbjct: 164 GKLKDAIGRVKEAKNVFAMMMKQDIKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 223
Query: 146 KPDGAVYNLLIVEHCSLRNVDKAYNMY 172
PD YN+LI C + D+A N++
Sbjct: 224 NPDIHSYNILINGFCKSKMTDEAMNLF 250
>Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:21460323-21462352 | 20130731
Length = 587
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N + +++N C G++V A + ++ V+Y ++G K EA +
Sbjct: 176 NGYTFGALVNGLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMDGFCKGGFVSEALSLF 235
Query: 86 L---------SLVYHNCR-------DPWSTLIFVT--LIENCTNNEFMSLVELVKGFQKR 127
SLV +NC W F+ ++E + + LV GF K
Sbjct: 236 AEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILVDGFCKE 295
Query: 128 DLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
L+ EA SV++ M+Q +P+ YN LI +C + +D+A ++
Sbjct: 296 GLILEAKSVISFMVQMGVEPNVVTYNSLIGGYCLMNEIDEAIKVF 340
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 78/200 (39%), Gaps = 53/200 (26%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
+ + +T++I C G++ +A D++ G + V YG INGL K TR A E+L
Sbjct: 83 DTITFTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETRAALELL 142
Query: 86 L---------------SLVYHNCRDP-----------------------WSTLI------ 101
S++ C+D +S LI
Sbjct: 143 RRVDGKLVQLDAVMYSSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIV 202
Query: 102 ---------FVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVY 152
F +I N + LV GF K V EA +VL M++ KPD Y
Sbjct: 203 GKLKDAIDLFNKMILENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTY 262
Query: 153 NLLIVEHCSLRNVDKAYNMY 172
+ L+ +C + V+KA +++
Sbjct: 263 SSLMDGYCLVNEVNKAESIF 282
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 18/161 (11%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V T++IN C +G++ KA D + G V YG+ INGL K T+ A ++L
Sbjct: 123 NTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETKAALQLL 182
Query: 86 LSL---------VYHN------CRDPWST---LIFVTLIENCTNNEFMSLVELVKGFQKR 127
+ V +N C+D + ++ +I N + ++ L+ GF
Sbjct: 183 EKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSIL 242
Query: 128 DLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
+ EA +LN M N PD + L+ C V KA
Sbjct: 243 GQMKEAVGLLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKA 283
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 25 LNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEM 84
L+ + Y+S+IN C G L+ A KL DE+ + G + + Y ++ L K +T +A +
Sbjct: 371 LDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIAL 430
Query: 85 LLS---------------LVYHNCRDPW---STLIFVTLIENCTNNEFMSLVELVKGFQK 126
L L+ C+D + IF L+ N + ++ ++ G K
Sbjct: 431 LSKMKDQGIQADIFTYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMINGLCK 490
Query: 127 RDLVNEAASVLNTMLQGNYKPDGAVYNLLI 156
L++EA ++L+ M PD Y ++I
Sbjct: 491 ESLLDEALTLLSKMEAKGCIPDAITYEIII 520
>Medtr7g090340.1 | PPR containing plant-like protein | HC |
chr7:35534069-35535796 | 20130731
Length = 521
Score = 50.4 bits (119), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 17/158 (10%)
Query: 15 DSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDK 74
D + + G N V + ++IN +C +G+L +A+++ E+ V Y ING +
Sbjct: 279 DLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQ 338
Query: 75 KARTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAA 134
+ EM + L F + N + ++ L+ G K +AA
Sbjct: 339 AGNS----EMGIGL-------------FEEMERNKVKADILTYNGLILGLCKEGKTKKAA 381
Query: 135 SVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
++ + +GN P+ + ++ LI C N ++A+ +Y
Sbjct: 382 YMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVY 419
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 17/147 (11%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
+ + YT++++AYC GE+ KA +LL + N V + V +NG + E L
Sbjct: 521 DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDG-ERL 579
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
+ + P +T + + C N + E+ K R ++
Sbjct: 580 IEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVM--------------- 624
Query: 146 KPDGAVYNLLIVEHCSLRNVDKAYNMY 172
PD YN+LI HC RN+ +A+ ++
Sbjct: 625 -PDSNTYNILIKGHCKARNMKEAWFLH 650
>Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:27208394-27205502 | 20130731
Length = 958
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 16 SLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKK 75
S E G N V Y ++IN+YC G + A +L E+ ++G + V Y + I GL K
Sbjct: 653 SRMIELGLAPNCVTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGGLCKT 712
Query: 76 ARTREAKEML-----------------LSLVYHNCRDPWSTL-IFVTLIENCTNNEFMSL 117
++A ++L L Y + + L I LI+
Sbjct: 713 GDVQKAADVLNEMLVMGVVPTPITHKFLVKAYSRFKKADTILQIHNKLIDMGLKLTLTVY 772
Query: 118 VELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMYM 173
L+ + + +A VL+ M++ D YN LI +C+ +V+KA+ Y+
Sbjct: 773 NTLITVLCRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYL 828
>Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29078320-29079032 | 20130731
Length = 190
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 9/133 (6%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V YTS+I+ C G++ A KL+DE+ + G + + Y ++ L K + +A +L
Sbjct: 44 NVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL 103
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
L +D +F L N + + +++GF + L NEA ++L+ M
Sbjct: 104 TKL-----KDQ----VFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGC 154
Query: 146 KPDGAVYNLLIVE 158
PD Y ++I+
Sbjct: 155 IPDAKTYEIIILS 167
>Medtr5g077930.1 | PPR containing plant-like protein | HC |
chr5:33269909-33266508 | 20130731
Length = 811
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 25/174 (14%)
Query: 15 DSLFTE--EGGLL-NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFING 71
+ LF E E GL+ N V +T++I+ C G++ A + + + + G + + Y ING
Sbjct: 316 NGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALING 375
Query: 72 LDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFM---------------- 115
L + +EA+++L ++ + + + F TL++ C + M
Sbjct: 376 LCRDGDLKEARKLLNEMIGNGFKP--DKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIE 433
Query: 116 ----SLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNV 165
+ L+ G + V +A +L ML +KPD Y ++I C +V
Sbjct: 434 LDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDV 487
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 28/181 (15%)
Query: 8 MFSGYGYDSLFTEEGGLLNE----------VNYTSVINAYCADGELVKADKLLDELTNFG 57
+ +G D E LLNE + +T++++ C DG++ A ++ D + G
Sbjct: 372 LINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEG 431
Query: 58 DVQEPVIYGVFINGLDKKARTREAKEMLLSLVY--HNCRDPWSTLIFVTLIENCTNNEFM 115
+ V + I+GL + R R+A+ ML ++ H DP T++ +
Sbjct: 432 IELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGA 491
Query: 116 SLVE----------------LVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEH 159
L++ L+ GF K+ + A +L+ ML P+ +N+L+ H
Sbjct: 492 KLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGH 551
Query: 160 C 160
C
Sbjct: 552 C 552
>Medtr5g007250.1 | PPR containing plant-like protein | HC |
chr5:1257943-1262153 | 20130731
Length = 1084
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 79/189 (41%), Gaps = 38/189 (20%)
Query: 21 EGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEP------------------ 62
EG N V YT++I+ +C G++ KA ++ + GD++
Sbjct: 559 EGCKPNVVTYTALIDGHCKAGQIEKACQIYARMR--GDIESSDMDKYFKLDHNNCEGPNV 616
Query: 63 VIYGVFINGLDKKARTREAKEMLLSLVYHNCR----------DPWSTL--------IFVT 104
+ YG ++GL K R +EA E+L +++ H C D + + +F
Sbjct: 617 ITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTK 676
Query: 105 LIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRN 164
+ E + + + K + ++ VL+ ML+ + P+ +Y ++ C +
Sbjct: 677 MSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGK 736
Query: 165 VDKAYNMYM 173
D+AY + +
Sbjct: 737 TDEAYKLML 745
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 17/136 (12%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
NEV + ++I+ +C D + A K +E+ G V Y INGL + EA
Sbjct: 272 NEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEA---- 327
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
D W ++ + L N ++ L+ GF K+ ++ EA VL+ + +
Sbjct: 328 --------IDLWDKMVGLGLKPN-----IVTYNALINGFCKKKMMKEATKVLDDVSKQEL 374
Query: 146 KPDGAVYNLLIVEHCS 161
P+ +N +I +C
Sbjct: 375 VPNVITFNTMIDAYCK 390
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 8 MFSGYGYDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGV 67
M G+ S EEG L N Y +I C +L A +LL+E+ N G + V Y +
Sbjct: 394 MEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 453
Query: 68 FINGLDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIEN-CTNNEFMSLVE------- 119
I+GL K ++R A E LL+ +++ P + + + TL++ C + + +
Sbjct: 454 LIDGLCKNDKSRNA-EKLLNEMFNLGLKP-NHVTYNTLMDGYCMEGKLKAALNVRKRMEK 511
Query: 120 ------------LVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVE 158
L+KG+ K + + A +LN ML+ P+ Y+++ +E
Sbjct: 512 ERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLE 562
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V Y ++I++ C + +A L E+ + G + V Y I+G + ++A ++
Sbjct: 211 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLF 270
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
+++ N N + LV GF K + EA +VL M++
Sbjct: 271 NKMIFEN-----------------INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGI 313
Query: 146 KPDGAVYNLLIVEHCSLRNVDKAYNMY 172
KPD YN L+ +C ++ V+KA +++
Sbjct: 314 KPDVFTYNSLMDRYCLVKEVNKAKHIF 340
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPV-IYGVFINGLDKKARTREAKEMLL 86
V Y ++I+ +C G++ A L +++ F ++ V + + ++G K+ R +EAK +L
Sbjct: 248 VTYNALISGFCIVGKMKDATDLFNKMI-FENINPNVYTFNILVDGFCKERRLKEAKNVLA 306
Query: 87 SLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYK 146
++ + +F T N M LVK VN+A + NT+ Q
Sbjct: 307 MMMKQGIKPD----VF-------TYNSLMDRYCLVKE------VNKAKHIFNTISQRGVN 349
Query: 147 PDGAVYNLLIVEHCSLRNVDKAYNMY 172
P+ Y+++I C ++ VD+A N++
Sbjct: 350 PNIHSYSIMIHGFCKIKKVDEAMNLF 375
>Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr3:33997007-33999751 | 20130731
Length = 579
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 31/170 (18%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N + +T++I C +G+ +A D + G + V Y + +NGL K TR A +ML
Sbjct: 79 NSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQML 138
Query: 86 LSLVYHNCRDPW---STLIFVTLIENCTNNEFM--------------------SLVELVK 122
R W +++ T+I++ +F+ + LV
Sbjct: 139 --------RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVD 190
Query: 123 GFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
K +A ++L M++ KP+ Y ++ +C + V+KA N++
Sbjct: 191 ALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIF 240
>Medtr1g033840.1 | PPR containing plant-like protein | HC |
chr1:12239375-12241751 | 20130731
Length = 605
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 27 EVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLL 86
+V Y S+IN YC G+ +KA+K+ DE+ G + V Y I + R R A +++
Sbjct: 401 QVTYASMINVYCRLGQNIKAEKIFDEMMQKGFDKCVVAYSSMIVMYGRTGRLRNAMKLVA 460
Query: 87 SLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYK 146
+ C+ + I+ +LI+ + G +K + + + N M +
Sbjct: 461 KMKEKGCKP--NVWIYNSLID-------------MHGKEKN--LRQIEKLWNEMKRRKVA 503
Query: 147 PDGAVYNLLIVEHCSLRNVDKAYNMY 172
PD Y +I +C + DK +Y
Sbjct: 504 PDKITYTSIIGAYCKAQEFDKCIKLY 529
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 26/158 (16%)
Query: 17 LFTEEGGLLNEVNYTSVINAYCADGELVKADKLL-----DELTNFGDVQEPVIYGVFING 71
L +E G N V T ++ YC G++ +A+KLL DEL V + +YGV ++G
Sbjct: 286 LMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELL----VVDERVYGVLVDG 341
Query: 72 LDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVN 131
+ R +A + RD + + C L+KG+ K V
Sbjct: 342 YCQMGRMEDAVRI---------RDEMLRVGLKVNMVICNT--------LIKGYCKLGQVC 384
Query: 132 EAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAY 169
EA V M+ N KPD YN L+ +C V KA+
Sbjct: 385 EAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAF 422
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 30 YTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLSLV 89
Y ++I+ +C G+L A L +++T + + + ++ K+ + +EAK +L
Sbjct: 80 YNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGKMKEAKNVL---- 135
Query: 90 YHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDG 149
+++ ++ L+ G+ VN+A S+ NTM QG PD
Sbjct: 136 -------------AMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDI 182
Query: 150 AVYNLLIVEHCSLRNVDKAYNMY 172
Y++LI C ++ D+A N++
Sbjct: 183 HSYSILINGLCKIKMTDEAMNLF 205
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 30 YTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLSLV 89
Y ++I+ +C G+L A L +++T + + + ++ K+ + +EAK +L
Sbjct: 80 YNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGKMKEAKNVL---- 135
Query: 90 YHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPDG 149
+++ ++ L+ G+ VN+A S+ NTM QG PD
Sbjct: 136 -------------AMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDI 182
Query: 150 AVYNLLIVEHCSLRNVDKAYNMY 172
Y++LI C ++ D+A N++
Sbjct: 183 HSYSILINGLCKIKMTDEAMNLF 205
>Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30153173-30230234 | 20130731
Length = 514
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 21 EGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVI-YGVFINGLDKKARTR 79
+G LNEV+Y ++IN C GE A +LL ++ V+ VI Y I+ K
Sbjct: 153 KGFYLNEVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVI 212
Query: 80 EA----KEMLLSLVYHNCRDPWSTLI---------------FVTLIENCTNNEFMSLVEL 120
+A EM++ +Y N +++LI F +I TN + L
Sbjct: 213 DAYDLYSEMIVKKIYPNVVT-FNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNIL 271
Query: 121 VKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
V G K V A SVL M++ + +PD YN L+ + ++ V+KA
Sbjct: 272 VDGLCKEGEVKRAKSVLTVMIKQHVEPDVVTYNSLMDGYFLVKEVNKA 319
>Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:51916-50064 | 20130731
Length = 381
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 18/164 (10%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V +++ C +G++ +A D + G V YG INGL K +T EA ++L
Sbjct: 201 NTVTLNTLVKGMCLNGKVKEALHFHDHVIALGFPLNQVTYGTLINGLCKMGKTTEALQVL 260
Query: 86 LSL----------VYHNCRDPWSTLIFVT--------LIENCTNNEFMSLVELVKGFQKR 127
+ +Y D IFVT +I + ++L L+ GF
Sbjct: 261 RKIDGKLVNTDVVMYSTIIDSLCKEIFVTEAYELYSQMIVKKFSPYVVTLSSLIYGFCIV 320
Query: 128 DLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
+ +A + + ML N P+ +N+L+ C NV A N+
Sbjct: 321 GQLKKAFCLFHEMLLTNIHPNVYTFNILVDALCKEGNVKGAMNL 364
>Medtr2g035450.1 | PPR containing plant-like protein | HC |
chr2:15110685-15106845 | 20130731
Length = 647
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 19/153 (12%)
Query: 21 EGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTRE 80
+G N Y+S++ Y G++ KA + E+T+ V Y + INGL K + +E
Sbjct: 414 KGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKE 473
Query: 81 AKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTM 140
A +++ ++ + ++ ++ GF LV + + N M
Sbjct: 474 A-----------------LIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQM 516
Query: 141 LQGNYK--PDGAVYNLLIVEHCSLRNVDKAYNM 171
L N K PD YN+L+ C+ +V +A ++
Sbjct: 517 LCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDI 549
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 24/169 (14%)
Query: 21 EGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTRE 80
EG N V + +I+A C G+L +A KL+D + G V V Y ++GL K + +
Sbjct: 239 EGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDK 298
Query: 81 AKEMLLSLVYHNCRDPWSTLIFVTLIENCTN---------------------NEFMSLVE 119
A +L +V + C + + F TL++ NEF S
Sbjct: 299 AMSLLNRMVANKCVP--NDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEF-SYSS 355
Query: 120 LVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
L+ G K + M++ KP+ VY+ LI C D+A
Sbjct: 356 LISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEA 404
>Medtr4g021220.1 | PPR containing plant-like protein | HC |
chr4:6857254-6858736 | 20130731
Length = 449
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V YTS+I ++C GE +A +LD + FG V I L + R EA +++
Sbjct: 245 NVVTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVTVFTLIESLCTEGRVDEAYKVV 304
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
LV +C +C N+ +S + + K + A ++ ML
Sbjct: 305 DKLVVEHCVSRG----------DCYNSLVISFIRVKK-------LEGAENLFKEMLAAEI 347
Query: 146 KPDGAVYNLLIVEHC 160
KPD +LL+ E C
Sbjct: 348 KPDTLASSLLLKELC 362
>Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0429:4891-7845 | 20130731
Length = 530
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 19/154 (12%)
Query: 16 SLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKK 75
++ +EG + N V Y+S+++ YC E+ KA +L +T G + Y + ING K
Sbjct: 305 AVMMKEGVIPNVVTYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMINGFCKI 364
Query: 76 ARTREAKEMLLSLVYHNCRD-PWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAA 134
EA + + CR +T+ + +LI+ G K ++ A
Sbjct: 365 KMINEAFSLFNEM---RCRGISPNTVTYSSLID---------------GLCKLGRISYAW 406
Query: 135 SVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
++ M PD YN LI C +VDKA
Sbjct: 407 EFVDEMRDNGQPPDICTYNSLIDALCKNHHVDKA 440
>Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:10128811-10130651 | 20130731
Length = 552
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 24/169 (14%)
Query: 21 EGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEP--VIYGVFINGLDKKART 78
+G LN+V+Y ++IN C GE A +LL + G + +P V+Y + I+G+ K
Sbjct: 164 QGFQLNQVSYGALINGLCKVGETRAALELLRRVD--GKIVQPNVVMYTMIIDGMCKDKLV 221
Query: 79 REA----KEMLLSLV------YHNCRDPWST---------LIFVTLIENCTNNEFMSLVE 119
+A EM+ + Y+N + L+ ++EN N + ++
Sbjct: 222 NDAFNLYSEMIAKRIFPDVVTYNNLISGFCVVGQLKDAIGLLHKMILENINPNVY-TMSI 280
Query: 120 LVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
LV F K EA +V+ +++ KP+ YN LI +C ++ V+KA
Sbjct: 281 LVDAFCKDGKPKEAKAVVAVLMKNGVKPNVVTYNSLIDGYCLVKQVNKA 329
>Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3641843-3643495 | 20130731
Length = 550
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLS 87
+ + ++IN C +G+L +A D + G + V Y INGL K TR A +ML
Sbjct: 130 ITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKK 189
Query: 88 L---------VYHN------CRDPWST---LIFVTLIENCTNNEFMSLVELVKGFQKRDL 129
+ V +N C+D + ++ +I + + ++ L+ GF
Sbjct: 190 IEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQ 249
Query: 130 VNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
+ EA + + M+ N PD +++L+ C N+ +A NM
Sbjct: 250 LKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNM 291
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 17/136 (12%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
NEV + ++I+ +C D + A K +E+ G V Y INGL + EA
Sbjct: 138 NEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEA---- 193
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
D W ++ + L N ++ L+ GF K+ ++ EA V + + +
Sbjct: 194 --------IDLWDKMVGLGLKPN-----IVTYNALINGFCKKKMMKEATKVFDDVSKQEL 240
Query: 146 KPDGAVYNLLIVEHCS 161
P+ +N +I +C
Sbjct: 241 VPNVITFNTMIDAYCK 256
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 8 MFSGYGYDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGV 67
M G+ S +EG L N Y +I C +L A +LL+E+ N G + V Y +
Sbjct: 260 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 319
Query: 68 FINGLDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIEN-CTNNEFMSLVE------- 119
I+GL K ++R A E LL+ +++ P + + + TL++ C + + +
Sbjct: 320 LIDGLCKNDKSRNA-EKLLNEMFNLGLKP-NHVTYNTLMDGYCMEGKLKAALNVRTRMEK 377
Query: 120 ------------LVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVE 158
L+KG+ K + + A +LN ML+ P+ Y+++ +E
Sbjct: 378 ERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLE 428
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 20 EEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTR 79
++G N V Y S+IN C +G+L +A L D++ G V Y ING KK +
Sbjct: 167 KQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMK 226
Query: 80 EAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNT 139
EA ++ D S V + ++ ++ + K ++ E S+ ++
Sbjct: 227 EATKVF---------DDVSKQELVPNV--------ITFNTMIDAYCKEGMMEEGFSLCSS 269
Query: 140 MLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
ML P+ + YN LI C +++ A
Sbjct: 270 MLDEGILPNVSTYNCLIAGLCRKQDLQAA 298
>Medtr7g451470.1 | PPR containing plant-like protein | LC |
chr7:17351106-17346828 | 20130731
Length = 1071
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLS 87
+ + VI+ C G + +A KLLD + G + +IYG + GL + + EA+ +LLS
Sbjct: 212 MTFNDVIHGLCKAGRIHEAAKLLDRMLLHGFTTDALIYGCLMPGLCRMGQVDEAR-VLLS 270
Query: 88 LVYHNCRDPWSTLI--FVT---------------LIENCTNNEFMSLVELVKGFQKRDLV 130
+ + ++TLI +V +I + FM + ++ G K+ +
Sbjct: 271 KIPNPNTVLYNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNI-MIDGLCKKGYL 329
Query: 131 NEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
A LN M++ ++P+ Y +LI C + A+ MY
Sbjct: 330 VSALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMY 371
>Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29212418-29210681 | 20130731
Length = 465
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 18/164 (10%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N + +T++I C G++ +A D+L G + YG I+GL K TR A ++L
Sbjct: 156 NTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLL 215
Query: 86 L----SLVYHN-----------CRDPW---STLIFVTLIENCTNNEFMSLVELVKGFQKR 127
LV N C+D + ++ ++ + ++ L+ GF
Sbjct: 216 RRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTV 275
Query: 128 DLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
+ +A + N M+ N KPD +N+L+ C + A +
Sbjct: 276 GKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKL 319
>Medtr1g031720.1 | PPR containing plant-like protein | LC |
chr1:11120039-11114706 | 20130731
Length = 1001
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLS 87
V + +++++ C +GE+ +A ++LD + FG V Y V +NGL K AKE++
Sbjct: 208 VTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQ 267
Query: 88 LVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKP 147
+ +++ + + + N L++GF K+++ EA + ML P
Sbjct: 268 M----------SMLGLKVSAHTYN-------PLIRGFCKKEMFEEANDLRREMLGRGALP 310
Query: 148 DGAVYNLLIVEHCSLRNVDKA 168
YN ++ C L V A
Sbjct: 311 TVVTYNTIMYSLCRLGRVSDA 331
>Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:35577637-35579719 | 20130731
Length = 590
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 20/160 (12%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLS 87
+ YT +I A G + +A KLLDE+ + G + Y V +NG+ K+ A E L
Sbjct: 217 ITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSR 276
Query: 88 LVYHNC-----------RD-----PW---STLIFVTLIENCTNNEFMSLVELVKGFQKRD 128
+ + C RD W L+ L++ C N ++ L+ +
Sbjct: 277 ISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNP-ITYSTLITALCRDG 335
Query: 129 LVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
++EA +VL M + PDG Y+ LI C VD A
Sbjct: 336 KIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLA 375
>Medtr5g018230.2 | PPR containing plant-like protein | HC |
chr5:6777791-6781281 | 20130731
Length = 749
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 14 YDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLD 73
Y +F +EG + + V Y +I +G + +A K+L+E+T G + Y I GL
Sbjct: 282 YTKMF-KEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLC 340
Query: 74 KKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEA 133
A+ + L + HN CT+ L+ KR +V EA
Sbjct: 341 DVDLLNRAQSLSLEISEHNV---------------CTHT------ILICEMCKRGMVAEA 379
Query: 134 ASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
+ N M + +P +N LI C +N++KA N++
Sbjct: 380 QELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLF 418
>Medtr5g018230.1 | PPR containing plant-like protein | HC |
chr5:6777784-6780862 | 20130731
Length = 749
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 14 YDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLD 73
Y +F +EG + + V Y +I +G + +A K+L+E+T G + Y I GL
Sbjct: 282 YTKMF-KEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLC 340
Query: 74 KKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEA 133
A+ + L + HN CT+ L+ KR +V EA
Sbjct: 341 DVDLLNRAQSLSLEISEHNV---------------CTHT------ILICEMCKRGMVAEA 379
Query: 134 ASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
+ N M + +P +N LI C +N++KA N++
Sbjct: 380 QELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLF 418
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
NEV + ++I+ +C D + A K +E+ G V Y INGL + EA
Sbjct: 272 NEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEA---- 327
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
D W ++ + L N ++ L+ GF K+ ++ EA V + + +
Sbjct: 328 --------IDLWDKMVGLGLKPN-----IVTYNALINGFCKKKMMKEATKVFDDVSKQEL 374
Query: 146 KPDGAVYNLLIVEHC 160
P+ +N +I +C
Sbjct: 375 VPNVITFNTMIDAYC 389
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 8 MFSGYGYDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGV 67
M G+ S +EG L N Y +I C +L A +LL+E+ N G + V Y +
Sbjct: 394 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 453
Query: 68 FINGLDKKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIEN-CTNNEFMSLVE------- 119
I+GL K ++R A E LL+ +++ P + + + TL++ C + + +
Sbjct: 454 LIDGLCKNDKSRNA-EKLLNEMFNLGLKP-NHVTYNTLMDGYCMEGKLKAALNVRTRMEK 511
Query: 120 ------------LVKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVE 158
L+KG+ K + + A +LN ML+ P+ Y+++ +E
Sbjct: 512 ERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLE 562
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 17/149 (11%)
Query: 20 EEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTR 79
++G N V Y S+IN C +G+L +A L D++ G V Y ING KK +
Sbjct: 301 KQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMK 360
Query: 80 EAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNT 139
EA T +F + + ++ ++ + K ++ E S+ ++
Sbjct: 361 EA-----------------TKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSS 403
Query: 140 MLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
ML P+ + YN LI C +++ A
Sbjct: 404 MLDEGILPNVSTYNCLIAGLCRKQDLQAA 432
>Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0110:45179-40986 | 20130731
Length = 542
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 17/137 (12%)
Query: 20 EEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTR 79
+ G N + Y+S+++ C + ++ KA LL ++ N G + Y + ++GL K + R
Sbjct: 398 DRGQPANIITYSSLLDGLCKNHQVDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLR 457
Query: 80 EAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNT 139
+A+E ++ L+ N + + ++ G K +EA S+L+
Sbjct: 458 DAQE-----------------VYQVLLNNTYHLDARIYTVMINGLCKEGFFDEALSLLSK 500
Query: 140 MLQGNYKPDGAVYNLLI 156
M PDG Y ++I
Sbjct: 501 MEDNGCTPDGVTYEIII 517
>Medtr7g070420.1 | PPR containing plant-like protein | HC |
chr7:25994193-25997035 | 20130731
Length = 737
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
++V+Y +I+ DG+ ++ +LL+E FG Y V + L + +A+E+L
Sbjct: 289 SDVSYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKVLVEALCRVLDVDKAREVL 348
Query: 86 LSLVYHNCRD-----------------PWSTL-IFVTLIENCTNNEFMSLVELVKGFQKR 127
++Y D P L + V ++E+ + ++L ++ GF K
Sbjct: 349 KLMLYKEGVDKTRIYNIYLRALCHVNNPTELLNVLVFMLESHCQTDVITLNTVINGFCKM 408
Query: 128 DLVNEAASVLNTMLQGNY-KPDGAVYNLLIVEHCSLRNVDKAYNMY 172
+EA VLN ML G + PD + LI VD+A +++
Sbjct: 409 GRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDLF 454
>Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35612850-35609750 | 20130731
Length = 1023
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAK----E 83
+ Y ++IN YC G+ A +L+E+ ++G + V Y + I GL K +A+ E
Sbjct: 671 ITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDE 730
Query: 84 MLLS-----------LVYHNCRDPWSTLIFVTLIENCTNNEFMSLV---ELVKGFQKRDL 129
ML+ LV R + I + + +SL L+ F + +
Sbjct: 731 MLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGM 790
Query: 130 VNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
+A VL+ M++ D YN LI +C+ +V+KA Y
Sbjct: 791 TRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTY 833
>Medtr2g103520.1 | PPR containing plant-like protein | HC |
chr2:44573560-44569817 | 20130731
Length = 822
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 20 EEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFING------LD 73
E L N+ +YT +++AYC G+ V A +L ++ GD + V YG FI+G +D
Sbjct: 373 ERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEID 432
Query: 74 KKARTREAK------------EMLLSLVYHNCRDPWSTLIFVTLIE-NCTNNEFMSLVEL 120
RE +L+S + R P + L+ +++ N + +M L
Sbjct: 433 VALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYM-YATL 491
Query: 121 VKGFQKRDLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHC 160
V GF + + +++A + ++ P YN++I C
Sbjct: 492 VDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLC 531
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 18/164 (10%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
N V T++IN C +GE+ KA D++ YG+ INGL K T+ A +L
Sbjct: 131 NTVTLTTLINGLCLNGEVKKAFHFYDDVIAKEFQLNQFSYGILINGLCKSGETKAALSLL 190
Query: 86 ---------------LSLVYHNCRDPWST---LIFVTLIENCTNNEFMSLVELVKGFQKR 127
+++ C+D T ++ ++E ++ L+ GF
Sbjct: 191 RMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKKIFPNVVTYSTLIYGFCIV 250
Query: 128 DLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
+ +A + N M+ N PD +N+LI C + KA N+
Sbjct: 251 GQLKDAVRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNL 294
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 21/147 (14%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIY--GVFINGLDKKARTREAKEML 85
V Y ++I C G+L A LL ++ + P +Y + ++ K+ + +EAK
Sbjct: 245 VTYNTLICGLCIMGQLKDAIGLLHKM--ILENINPTVYTFSILVDAFCKEGKVKEAKN-- 300
Query: 86 LSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNY 145
+FV +++ ++ L+ G+ + VN+A S+ NTM Q
Sbjct: 301 ---------------VFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGV 345
Query: 146 KPDGAVYNLLIVEHCSLRNVDKAYNMY 172
PD Y+++I C ++ VD+A ++
Sbjct: 346 APDVHSYSIMISGFCKIKMVDEAMKLF 372
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 29 NYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLSL 88
Y ++I+ +C G+L A L +++T+ + + + + ++G K +EAK +L
Sbjct: 370 TYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVL--- 426
Query: 89 VYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPD 148
+++ + ++ L+ G+ + VN+A S+ NTM +
Sbjct: 427 --------------AMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTAN 472
Query: 149 GAVYNLLIVEHCSLRNVDKAYNMY 172
YN++I C ++ VD+A ++
Sbjct: 473 VQSYNIMINGFCKIKMVDEAMKLF 496
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 26 NEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML 85
+ + + I +C G++ +A D+L G + V YG INGL K TR A E+L
Sbjct: 139 DTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELL 198
Query: 86 ---------LSLVYHN------CRDPW---STLIFVTLIENCTNNEFMSLVELVKGFQKR 127
L +V ++ C+D + ++ ++ ++ ++ L+ GF
Sbjct: 199 RRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIV 258
Query: 128 DLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYN 170
+ +A + N M N PD +N+L+ C V +A N
Sbjct: 259 GKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKN 301
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 29 NYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLSL 88
+ V+ A+C E+ A LL ++T G V +IY + I+ L + R EA ++L +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 89 VYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPD 148
C + + +++ G K ++EAA + + ML ++ D
Sbjct: 262 FLMGCEP-----------------DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTAD 304
Query: 149 GAVYNLLIVEHCSLRNVDKAYNM 171
+ L+ C + VD+A M
Sbjct: 305 ALIQGYLMHGLCRMGKVDEARAM 327
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 17/144 (11%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLS 87
+ YT++I C +G++ ++ D L + G + V YG INGL K +T A +L
Sbjct: 81 ITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRK 140
Query: 88 LVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKP 147
+ CR +++ T+I+ G K LV +A + M + P
Sbjct: 141 IEGEICRP--DVVMYNTIID---------------GLCKDKLVRDAFDLYCEMFEKRVFP 183
Query: 148 DGAVYNLLIVEHCSLRNVDKAYNM 171
+ Y LI C + +DKA+ +
Sbjct: 184 NVVTYTSLIYGFCIVGQLDKAFGL 207
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 29 NYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLSL 88
+ V+ A+C E+ A LL ++T G V +IY + I+ L + R EA ++L +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 89 VYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPD 148
C + + +++ G K ++EAA + + ML ++ D
Sbjct: 262 FLMGCEP-----------------DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTAD 304
Query: 149 GAVYNLLIVEHCSLRNVDKAYNM 171
+ L+ C + VD+A M
Sbjct: 305 ALIQGYLMHGLCRMGKVDEARAM 327
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 29 NYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLSL 88
+ V+ A+C E+ A LL ++T G V +IY + I+ L + R EA ++L +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 89 VYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPD 148
C + + +++ G K ++EAA + + ML ++ D
Sbjct: 262 FLMGCEP-----------------DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTAD 304
Query: 149 GAVYNLLIVEHCSLRNVDKAYNM 171
+ L+ C + VD+A M
Sbjct: 305 ALIQGYLMHGLCRMGKVDEARAM 327
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 29 NYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLSL 88
+ V+ A+C E+ A LL ++T G V +IY + I+ L + R EA ++L +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 89 VYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPD 148
C + + +++ G K ++EAA + + ML ++ D
Sbjct: 262 FLMGCEP-----------------DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTAD 304
Query: 149 GAVYNLLIVEHCSLRNVDKAYNM 171
+ L+ C + VD+A M
Sbjct: 305 ALIQGYLMHGLCRMGKVDEARAM 327
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 29 NYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLSL 88
+ V+ A+C E+ A LL ++T G V +IY + I+ L + R EA ++L +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 89 VYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPD 148
C + + +++ G K ++EAA + + ML ++ D
Sbjct: 262 FLMGCEP-----------------DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTAD 304
Query: 149 GAVYNLLIVEHCSLRNVDKAYNM 171
+ L+ C + VD+A M
Sbjct: 305 ALIQGYLMHGLCRMGKVDEARAM 327
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 29 NYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEMLLSL 88
+ V+ A+C E+ A LL ++T G V +IY + I+ L + R EA ++L +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 89 VYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGNYKPD 148
C + + +++ G K ++EAA + + ML ++ D
Sbjct: 262 FLMGCEP-----------------DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTAD 304
Query: 149 GAVYNLLIVEHCSLRNVDKAYNM 171
+ L+ C + VD+A M
Sbjct: 305 ALIQGYLMHGLCRMGKVDEARAM 327
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 17/149 (11%)
Query: 20 EEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTR 79
E+G L+ + Y +VI+ +C G++ KA +LL+E+ G V YG ++GL K R
Sbjct: 615 EQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLD 674
Query: 80 EAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNT 139
EA ML D + +I+ +LI+ GF K ++EA +L
Sbjct: 675 EAY-MLFEEAKSIGVD-LNVVIYSSLID---------------GFGKVGRIDEAYLILEE 717
Query: 140 MLQGNYKPDGAVYNLLIVEHCSLRNVDKA 168
++Q P+ +N L+ +D+A
Sbjct: 718 LMQKGLTPNSYTWNCLLDALVKAEEIDEA 746
>Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0054:54977-53081 | 20130731
Length = 521
Score = 47.0 bits (110), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 28 VNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEML-- 85
+ + I +C G++ +A D+L G + V YG INGL K TR A ++L
Sbjct: 154 ITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRR 213
Query: 86 -------LSLVYHN-----------CRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKR 127
L+ V +N D + ++ ++ + + ++ L++GF
Sbjct: 214 VDGKLVQLNAVMYNTVIDGMYKDKHVNDAFD--LYSEMVAKRISPDVVTYSALIRGFFIV 271
Query: 128 DLVNEAASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
+ +A + N M+ N KPD +N+L+ C + KA N+
Sbjct: 272 GKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNV 315
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 17/148 (11%)
Query: 25 LNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKARTREAKEM 84
L+ V Y+S+I++ C D + A L E+ V Y I+G + ++A ++
Sbjct: 40 LDAVMYSSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDL 99
Query: 85 LLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASVLNTMLQGN 144
++ N N + LV GF K V EA +VL M++
Sbjct: 100 FNKMILEN-----------------INPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQG 142
Query: 145 YKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
KPD Y+ L+ +C + V+KA +++
Sbjct: 143 IKPDVVTYSSLMDGYCLVNEVNKAESIF 170
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 17 LFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLDKKA 76
L T +G L + Y +++ C +G++ +A +L D++ +F V + V Y I+G +
Sbjct: 306 LMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHR 365
Query: 77 RTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEAASV 136
+ A +++ + + EN + M +K F ++EA++V
Sbjct: 366 GSDAAFKLVEEMKARGVK------------ENGVTHNIM-----IKWFCTEGKIDEASNV 408
Query: 137 LNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNM 171
+ M++ + PD YN +I +C + +AY M
Sbjct: 409 MVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKM 443
>Medtr5g039700.1 | PPR containing plant-like protein | HC |
chr5:17489163-17486554 | 20130731
Length = 749
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 22/159 (13%)
Query: 14 YDSLFTEEGGLLNEVNYTSVINAYCADGELVKADKLLDELTNFGDVQEPVIYGVFINGLD 73
Y +F ++G + + V Y +I +G + +A K+L+E+T G + Y I GL
Sbjct: 282 YTKMF-KQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLC 340
Query: 74 KKARTREAKEMLLSLVYHNCRDPWSTLIFVTLIENCTNNEFMSLVELVKGFQKRDLVNEA 133
A+ + L + HN CT+ L+ KR +V EA
Sbjct: 341 DVGLLNRAQSLRLEISEHNV---------------CTHT------ILICEMCKRGMVAEA 379
Query: 134 ASVLNTMLQGNYKPDGAVYNLLIVEHCSLRNVDKAYNMY 172
+ N M + +P +N LI C N++KA N++
Sbjct: 380 QELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLF 418