Miyakogusa Predicted Gene

Lj3g3v3312840.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3312840.1 Non Characterized Hit- tr|J9KLT2|J9KLT2_ACYPI
Uncharacterized protein OS=Acyrthosiphon pisum PE=4
SV,39.06,7e-16,DUF2054,Uncharacterised protein family UPF0454;
seg,NULL; UNCHARACTERIZED,Uncharacterised protein fa,CUFF.45557.1
         (272 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g067140.1 | transmembrane protein, putative | HC | chr4:25...   435   e-122

>Medtr4g067140.1 | transmembrane protein, putative | HC |
           chr4:25318316-25325137 | 20130731
          Length = 302

 Score =  435 bits (1118), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 207/247 (83%), Positives = 226/247 (91%), Gaps = 1/247 (0%)

Query: 25  AIRKDIGLQSIIPTCKTTVQGRYHLTDDNGFVCSALSVDSMSRCCPQSREKFSCHGCNVL 84
           AIRKDIG +  IP C  TVQGR+ L+D+NG+VC+ALSVDS SRCCPQ+ +KFSCHGCN+L
Sbjct: 28  AIRKDIGFK-FIPFCNNTVQGRFLLSDNNGYVCNALSVDSKSRCCPQTGKKFSCHGCNLL 86

Query: 85  SQCCNSYEYCVSCCLNPALTSKEQVLKMKISKPVTARTYENVFDYCAARCRHSSESVVHE 144
           SQCCNSYEYCVSCCLNPA+T KE VLKMKI+KP TARTYE+VFDYCA RCRHSSESVVHE
Sbjct: 87  SQCCNSYEYCVSCCLNPAMTKKEHVLKMKIAKPSTARTYESVFDYCAGRCRHSSESVVHE 146

Query: 145 NAYLSDFHHCFSLPSNSSGTNVTLTEARLNGINVVVGRQGESCSSVCKLRGQSCVPNKLV 204
           NAYLSDFHHCFSLPSNSS  N TLTEARLNGINVV GRQGESC+SVCK RGQSCVPNKLV
Sbjct: 147 NAYLSDFHHCFSLPSNSSVANSTLTEARLNGINVVAGRQGESCNSVCKSRGQSCVPNKLV 206

Query: 205 VLNNCDIIQRYMSCKGSCLASVGTDQPAEVVYDAPKDLNPGSCLYTETESVLSCDGSHQH 264
           VLN+CDIIQ+YMSCKG CLASVGTDQPAEVVYDAPK +NP SCLYTET+S+LSCDGSHQH
Sbjct: 207 VLNHCDIIQKYMSCKGGCLASVGTDQPAEVVYDAPKYMNPESCLYTETQSILSCDGSHQH 266

Query: 265 TKRLCPC 271
           T+RLCPC
Sbjct: 267 TRRLCPC 273