Miyakogusa Predicted Gene

Lj3g3v3312790.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3312790.2 Non Characterized Hit- tr|F4IAF4|F4IAF4_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At1,40.54,2e-18,coiled-coil,NULL,CUFF.45548.2
         (235 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g067090.1 | hypothetical protein | HC | chr4:25276485-2528...   235   3e-62
Medtr2g098830.2 | aleurone layer morphogenesis protein | LC | ch...   202   2e-52
Medtr2g098830.1 | aleurone layer morphogenesis protein | LC | ch...   202   2e-52

>Medtr4g067090.1 | hypothetical protein | HC |
           chr4:25276485-25286044 | 20130731
          Length = 646

 Score =  235 bits (599), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 138/263 (52%), Positives = 164/263 (62%), Gaps = 41/263 (15%)

Query: 1   MLKQNENNKICTLRLSDSIKEPHELDANK-----------------------------PS 31
           M +Q ENN  CTLR  DSI E HE+D NK                             PS
Sbjct: 358 MHEQKENNGSCTLRPCDSIMETHEMDVNKSSIYPSQNKEKCQKITNAMQFGEHQEKNNPS 417

Query: 32  VQYNSNCSAITVKAMQADSTSMDITESEINNLASCHKICANGPNTSSEKDTIDGCKLIAN 91
           VQ+ SN SA  ++AM+ DST M      +N      K+CAN PNTS EKDT   C   +N
Sbjct: 418 VQFKSNGSANAIQAMKIDSTRM------LNGKGGV-KLCANKPNTSYEKDTTGACTPSSN 470

Query: 92  HCNSDVEKLHILVDSKEILSQTALTALIRKRNELALQQRKIEDDIANCEKKIQRVLTDGE 151
           H NSD EK   L DSK+ L +TA+++LIRKRNELALQQRKI+ +IA  +++IQR+LTDG 
Sbjct: 471 HSNSDKEKPQSLQDSKKRL-RTAISSLIRKRNELALQQRKIDGEIAIVDEQIQRMLTDGN 529

Query: 152 DEFELKIESIIEGCNDVWVRNQERTCGQQSFPLKRKRLSEAVFIALSPCQELDGVCRENN 211
           D+F   IE I+EGCNDV V NQE   GQQS PLKRK LSE    A S C++LDGVC ENN
Sbjct: 530 DDFVSMIECIMEGCNDVSVTNQEGIGGQQSLPLKRKDLSE----ARSSCKDLDGVCHENN 585

Query: 212 WLLPTYHLFQSVGGFQANVTVKG 234
           W+LPTY + Q  GGFQANVTV G
Sbjct: 586 WVLPTYRISQPNGGFQANVTVNG 608


>Medtr2g098830.2 | aleurone layer morphogenesis protein | LC |
            chr2:42307950-42316489 | 20130731
          Length = 1299

 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/235 (49%), Positives = 147/235 (62%), Gaps = 10/235 (4%)

Query: 8    NKICTLRLSDSIKEPHELDANKPSVQYNSNCSAITVKAMQADSTSMDITESEINNLASCH 67
            NK C    ++++    +     PSVQ++SN      KA +A S    ITE  I + ++  
Sbjct: 1035 NKECQKHTANTLHISEDQKIENPSVQHHSNECTRPSKAEKAVSKRKHITEGGIKDQSAFD 1094

Query: 68   KICANGPNTSSEKDTIDGCKLIANHCNSDVEKLHILVDSK-EILSQTALTALIRKRNELA 126
            KICA    T+ E D+++ C L AN  N ++EK+   + SK  ILSQTAL ALIRKRN LA
Sbjct: 1095 KICAG---TTFENDSVEKCILNANSSNKNLEKIQTFIASKGTILSQTALNALIRKRNALA 1151

Query: 127  LQQRKIEDDIANCEKKIQRVLTDGEDEFELKIESIIEGCNDVWVRNQERTCGQ----QSF 182
            LQQR IED++A C  KI R L   ED+FELK+ES+IEGCN  W+RNQ R C Q    Q  
Sbjct: 1152 LQQRAIEDEMAVCNMKIHRWLAGEEDDFELKLESVIEGCNGTWLRNQGRMCSQYLDDQCL 1211

Query: 183  P--LKRKRLSEAVFIALSPCQELDGVCRENNWLLPTYHLFQSVGGFQANVTVKGV 235
            P  +K KRL+EAV    SPCQELDG+C ENNW+LPTY +  S G F A V VKGV
Sbjct: 1212 PQSVKSKRLTEAVLTLHSPCQELDGICHENNWILPTYSVSLSDGEFHATVRVKGV 1266


>Medtr2g098830.1 | aleurone layer morphogenesis protein | LC |
            chr2:42304780-42316504 | 20130731
          Length = 1566

 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/235 (49%), Positives = 147/235 (62%), Gaps = 10/235 (4%)

Query: 8    NKICTLRLSDSIKEPHELDANKPSVQYNSNCSAITVKAMQADSTSMDITESEINNLASCH 67
            NK C    ++++    +     PSVQ++SN      KA +A S    ITE  I + ++  
Sbjct: 1302 NKECQKHTANTLHISEDQKIENPSVQHHSNECTRPSKAEKAVSKRKHITEGGIKDQSAFD 1361

Query: 68   KICANGPNTSSEKDTIDGCKLIANHCNSDVEKLHILVDSK-EILSQTALTALIRKRNELA 126
            KICA    T+ E D+++ C L AN  N ++EK+   + SK  ILSQTAL ALIRKRN LA
Sbjct: 1362 KICAG---TTFENDSVEKCILNANSSNKNLEKIQTFIASKGTILSQTALNALIRKRNALA 1418

Query: 127  LQQRKIEDDIANCEKKIQRVLTDGEDEFELKIESIIEGCNDVWVRNQERTCGQ----QSF 182
            LQQR IED++A C  KI R L   ED+FELK+ES+IEGCN  W+RNQ R C Q    Q  
Sbjct: 1419 LQQRAIEDEMAVCNMKIHRWLAGEEDDFELKLESVIEGCNGTWLRNQGRMCSQYLDDQCL 1478

Query: 183  P--LKRKRLSEAVFIALSPCQELDGVCRENNWLLPTYHLFQSVGGFQANVTVKGV 235
            P  +K KRL+EAV    SPCQELDG+C ENNW+LPTY +  S G F A V VKGV
Sbjct: 1479 PQSVKSKRLTEAVLTLHSPCQELDGICHENNWILPTYSVSLSDGEFHATVRVKGV 1533