Miyakogusa Predicted Gene

Lj3g3v3271510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3271510.1 tr|G5C812|G5C812_HETGA Phosphatidylinositol
N-acetylglucosaminyltransferase subunit P
OS=Heterocepha,29.8,6e-19,PHOSPHATIDYLINOSITOL
N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL
REGION PROTEI,CUFF.45537.1
         (169 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g084540.1 | PIG-P protein | HC | chr2:35702173-35704047 | ...   277   3e-75
Medtr2g022850.1 | PIG-P protein | LC | chr2:7954000-7957420 | 20...   259   1e-69

>Medtr2g084540.1 | PIG-P protein | HC | chr2:35702173-35704047 |
           20130731
          Length = 168

 Score =  277 bits (709), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 136/169 (80%), Positives = 150/169 (88%), Gaps = 1/169 (0%)

Query: 1   MESPHSVNSPRRTLSLSRQRRANYTSFPDPVDNKTSGFGLSGDHGPKPSEVYGFVGSIST 60
           MESP SVNSPRRTLSLSR+RRA   SF D  D   S   LS DHGPKPSEVYGFVGSI+T
Sbjct: 1   MESPRSVNSPRRTLSLSRKRRAT-VSFLDSDDKNNSASALSADHGPKPSEVYGFVGSITT 59

Query: 61  IVASVIFFIWAYVPESWLHSICITYYPSRYWALAVPTYVMVTIVLMLGFYIGLNFISTPS 120
           +VA+VIF +WAYVPESWLHSI I+YYPSRYWALAVPTY+MVTIVLML FYIGLNF+STPS
Sbjct: 60  VVATVIFLVWAYVPESWLHSIGISYYPSRYWALAVPTYLMVTIVLMLVFYIGLNFMSTPS 119

Query: 121 PASIYTVFDEFSRDPLSLDCSLEGEEKPIDPISDIGIDRINDAMFNSAA 169
           PASI TV+DEFSRDPL+LD S+EG+EKPIDPISDIGIDRINDAMFN++A
Sbjct: 120 PASINTVYDEFSRDPLTLDSSVEGDEKPIDPISDIGIDRINDAMFNNSA 168


>Medtr2g022850.1 | PIG-P protein | LC | chr2:7954000-7957420 |
           20130731
          Length = 249

 Score =  259 bits (661), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 129/164 (78%), Positives = 141/164 (85%), Gaps = 1/164 (0%)

Query: 2   ESPHSVNSPRRTLSLSRQRRANYTSFPDPVDNKTSGFGLSGDHGPKPSEVYGFVGSISTI 61
           ESP SVNSPRRTLSLSR+RRA   SF D  D   S  GLS DHGPKPSEVYGFVGSI+T+
Sbjct: 83  ESPRSVNSPRRTLSLSRKRRAT-VSFLDSDDKNNSASGLSRDHGPKPSEVYGFVGSITTV 141

Query: 62  VASVIFFIWAYVPESWLHSICITYYPSRYWALAVPTYVMVTIVLMLGFYIGLNFISTPSP 121
           VA+VIF +WAYVPESWLHSI I+YYPSRYWALAVPTYVMVTIVLML FYIGLNF+STPSP
Sbjct: 142 VATVIFLVWAYVPESWLHSIGISYYPSRYWALAVPTYVMVTIVLMLAFYIGLNFMSTPSP 201

Query: 122 ASIYTVFDEFSRDPLSLDCSLEGEEKPIDPISDIGIDRINDAMF 165
           AS+  VFDE+SRDPLS D   + +EKPIDPISD+GIDRINDAMF
Sbjct: 202 ASLNAVFDEYSRDPLSRDFLEDKDEKPIDPISDVGIDRINDAMF 245