Miyakogusa Predicted Gene

Lj3g3v3261430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3261430.1 Non Characterized Hit- tr|I1NEW4|I1NEW4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,43.75,4e-16,zf-CCHC_4,Zinc knuckle CX2CX4HX4C; DUF4283,Domain of
unknown function DUF4283; ZF_CCHC,Zinc finger, ,CUFF.45535.1
         (116 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g045237.1 | DUF4283 domain protein | LC | chr6:16169322-16...    65   1e-11
Medtr0010s0370.1 | DUF4283 domain protein | LC | scaffold0010:24...    52   2e-07
Medtr0010s0350.1 | DUF4283 domain protein | LC | scaffold0010:24...    52   2e-07
Medtr7g056053.1 | DUF4283 domain protein | LC | chr7:19409287-19...    50   4e-07
Medtr6g471850.1 | DUF4283 domain protein | LC | chr6:25821627-25...    50   5e-07
Medtr7g445700.1 | DUF4283 domain protein | LC | chr7:15486160-15...    50   7e-07

>Medtr6g045237.1 | DUF4283 domain protein | LC |
           chr6:16169322-16170764 | 20130731
          Length = 480

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 1   MWVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLENRL-GLFFRIKVTIDLTKPLLRGT 59
           +W+R+ +LP +   +   + +G +IG+ V +D   +NR+ G + R+ V +DL+K +    
Sbjct: 170 VWIRLLELPQEYWMDRTLKEIGSAIGTPVLIDSATQNRVFGHYVRVLVDMDLSKHIFNEV 229

Query: 60  MLFWQGKELKVYFRYERLPNFCFACGRIGHQIKDCDEFEDVEE 102
           M+   G    +   YE LP FC   G IGH I  C     V+E
Sbjct: 230 MIERTGFSFSIEITYECLPAFCTHYGNIGHHISSCRWLHPVKE 272


>Medtr0010s0370.1 | DUF4283 domain protein | LC |
           scaffold0010:249562-248996 | 20130731
          Length = 188

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 2   WVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLE-NRLGLFFRIKVTIDLTKPLLR 57
           W++V+DLP    SE V + + + IG F+E D K   N L  + RI+V +D+TKPL R
Sbjct: 121 WIQVHDLPTGFMSEKVGKDIANHIGEFLEYDAKNNSNFLHTYMRIRVLLDVTKPLKR 177


>Medtr0010s0350.1 | DUF4283 domain protein | LC |
           scaffold0010:243991-243425 | 20130731
          Length = 188

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 2   WVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLE-NRLGLFFRIKVTIDLTKPLLR 57
           W++V+DLP    SE V + + + IG F+E D K   N L  + RI+V +D+TKPL R
Sbjct: 121 WIQVHDLPTGFMSEKVGKDIANHIGEFLEYDAKNNSNFLHTYMRIRVLLDVTKPLKR 177


>Medtr7g056053.1 | DUF4283 domain protein | LC |
           chr7:19409287-19407848 | 20130731
          Length = 354

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 1   MWVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLENRL-GLFFRIKVTIDLTKPLLRGT 59
           +WVR+  LP +   +     +   +G+ + +D   ++RL G +  + V +D+   L    
Sbjct: 28  LWVRLLHLPQEYWRKTTLFEIASGLGTPLSIDEATQSRLFGHYAHVLVDVDMFDTLFETV 87

Query: 60  MLFWQGKELKVYFRYERLPNFCFACGRIGHQIKDCDEFE 98
           ++  +G    +   YER P F   C RIGH I+ C++ +
Sbjct: 88  LVEREGYAFPMNVEYERQPAFFPRCKRIGHSIQFCNQLK 126


>Medtr6g471850.1 | DUF4283 domain protein | LC |
           chr6:25821627-25823284 | 20130731
          Length = 496

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 1   MWVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLENRL-GLFFRIKVTIDLTKPLLRGT 59
           +W+R+ +LP +   + + + +  +IG+ + +D   +NR+ G + R+ V +DL+K +    
Sbjct: 137 VWIRLLELPQEYWMDRMLKEIASAIGTPLLIDSATQNRVFGHYARVLVDMDLSKHIFNEV 196

Query: 60  MLFWQGKELKVYFRYERLPNFCFACGRI 87
           M+   G    +   YERLP F    G +
Sbjct: 197 MIERTGFSFSIEITYERLPAFVLTAGTL 224


>Medtr7g445700.1 | DUF4283 domain protein | LC |
           chr7:15486160-15484152 | 20130731
          Length = 610

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 1   MWVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLENR-LGLFFRIKVTIDLTKPLLRGT 59
           +WVR  +LP +   +     +   +G+ + +D   + R  G+F R+ + +DL + L    
Sbjct: 168 IWVRFLNLPQEYWEKQTLFEIASGLGTPLSIDETTQRRRFGIFARVLIDVDLFENLFESV 227

Query: 60  MLFWQGKELKVYFRYERLPNFCFACGRIGHQIKDCDEF 97
           ++  +   L +  +YE+ P FC     +GH I+ C + 
Sbjct: 228 VVEREDHALSISIQYEKHPLFCAHYKMLGHSIQSCSKL 265