Miyakogusa Predicted Gene

Lj3g3v3243150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3243150.1 Non Characterized Hit- tr|I1HYC6|I1HYC6_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,70,3e-19,HMA,Heavy metal-associated domain, HMA; no
description,NULL; HGSCAVENGER,Mercury scavenger protein; ,CUFF.45511.1
         (70 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g012390.1 | heavy metal P-type ATPase | HC | chr8:3521331-...   103   4e-23
Medtr8g012390.2 | heavy metal P-type ATPase | HC | chr8:3521331-...   103   4e-23
Medtr5g010420.1 | heavy metal P-type ATPase | HC | chr5:2783669-...    76   8e-15
Medtr2g035840.1 | heavy metal P-type ATPase | HC | chr2:15206300...    65   1e-11
Medtr4g094695.1 | heavy metal P-type ATPase | HC | chr4:38743754...    64   2e-11
Medtr8g079250.3 | heavy metal P-type ATPase | HC | chr8:33897975...    63   6e-11
Medtr8g079250.1 | heavy metal P-type ATPase | HC | chr8:33897975...    63   7e-11
Medtr8g079250.2 | heavy metal P-type ATPase | HC | chr8:33897975...    62   2e-10
Medtr8g079250.4 | heavy metal P-type ATPase | HC | chr8:33897975...    62   2e-10

>Medtr8g012390.1 | heavy metal P-type ATPase | HC |
           chr8:3521331-3527812 | 20130731
          Length = 957

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/70 (72%), Positives = 60/70 (85%), Gaps = 1/70 (1%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           M CTSCS+SVE ALQMIDGVK+A+VGLALEEAKV +DPNL +  K+IE+IEDAGF A+LI
Sbjct: 110 MACTSCSESVEKALQMIDGVKRAIVGLALEEAKVHYDPNLANPEKIIESIEDAGFGAELI 169

Query: 61  NSRNDDMNKV 70
           +S N D NKV
Sbjct: 170 SSGN-DANKV 178


>Medtr8g012390.2 | heavy metal P-type ATPase | HC |
           chr8:3521331-3527812 | 20130731
          Length = 844

 Score =  103 bits (256), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/70 (72%), Positives = 60/70 (85%), Gaps = 1/70 (1%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           M CTSCS+SVE ALQMIDGVK+A+VGLALEEAKV +DPNL +  K+IE+IEDAGF A+LI
Sbjct: 110 MACTSCSESVEKALQMIDGVKRAIVGLALEEAKVHYDPNLANPEKIIESIEDAGFGAELI 169

Query: 61  NSRNDDMNKV 70
           +S N D NKV
Sbjct: 170 SSGN-DANKV 178


>Medtr5g010420.1 | heavy metal P-type ATPase | HC |
           chr5:2783669-2773962 | 20130731
          Length = 996

 Score = 75.9 bits (185), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 56/70 (80%), Gaps = 1/70 (1%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTCTSCS +VE AL+ + GV  A V LA EEA+V ++PN++  ++++EA+++AGFEA LI
Sbjct: 133 MTCTSCSTAVESALKALSGVVGAQVALATEEAQVHYNPNIITHSQILEAVDEAGFEATLI 192

Query: 61  NSRNDDMNKV 70
           +S ++D++K+
Sbjct: 193 SS-SEDLSKI 201



 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 43/61 (70%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC++C+ SVE +++ + G+ +AVV +    A+V+F P+ V+   + EAIEDAGF+A L+
Sbjct: 55  MTCSACAGSVEKSIKRLHGIHEAVVDVLHNRARVIFHPSFVNEEAICEAIEDAGFDAALL 114

Query: 61  N 61
            
Sbjct: 115 T 115


>Medtr2g035840.1 | heavy metal P-type ATPase | HC |
           chr2:15206300-15212503 | 20130731
          Length = 998

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 42/60 (70%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTCT+CS S+E AL+ +DGV  A V L   +A V+F+P LV    +  AIEDAGFEAD++
Sbjct: 54  MTCTACSNSIESALKAVDGVLTASVALLQNKADVVFNPALVKDEDIKNAIEDAGFEADIL 113



 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 43/66 (65%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +C  SVE  L+ + GVK+AVV LA    +V +DP+++  + ++ AIED+GFEA  +
Sbjct: 136 MTCAACVNSVEGILRNLPGVKRAVVALATSLGEVEYDPSVISKDDIVNAIEDSGFEASFV 195

Query: 61  NSRNDD 66
            S   D
Sbjct: 196 QSNEQD 201


>Medtr4g094695.1 | heavy metal P-type ATPase | HC |
           chr4:38743754-38750293 | 20130731
          Length = 992

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 41/66 (62%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +C  SVE  L  I GVKKAVV LA    +V +DP ++    ++ AIEDAGFEA  +
Sbjct: 132 MTCAACVNSVEGILNDITGVKKAVVALATSLGEVEYDPIVISKEDIVTAIEDAGFEASFV 191

Query: 61  NSRNDD 66
            S + D
Sbjct: 192 QSTSQD 197



 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 42/61 (68%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +CS SVE AL  +DGV +A V L   +A V+F+ NLV    +  AIEDAGFEA+++
Sbjct: 48  MTCAACSNSVEAALMSVDGVIQASVALLQNKADVVFNRNLVKDEDIKNAIEDAGFEAEIL 107

Query: 61  N 61
           +
Sbjct: 108 H 108


>Medtr8g079250.3 | heavy metal P-type ATPase | HC |
           chr8:33897975-33903943 | 20130731
          Length = 882

 Score = 62.8 bits (151), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 1/70 (1%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTCTSCS +V+  LQ + GV+ A V LA EEA++ +DP ++   +++E I + GF   LI
Sbjct: 141 MTCTSCSSNVQSVLQSLRGVQIAQVALATEEAEIRYDPKIISYTQLMETISNTGFNPILI 200

Query: 61  NSRNDDMNKV 70
            S+ + ++K+
Sbjct: 201 -SKGEHISKI 209



 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 43/57 (75%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEA 57
           MTC +C+ SVE A++ + G+++AVV +  ++A+VL+ P +V+   + +AIEDAGFEA
Sbjct: 62  MTCAACAGSVEKAIKRLPGIREAVVDVLNDKAQVLYLPTIVNEESIRDAIEDAGFEA 118


>Medtr8g079250.1 | heavy metal P-type ATPase | HC |
           chr8:33897975-33903943 | 20130731
          Length = 994

 Score = 62.8 bits (151), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 1/70 (1%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTCTSCS +V+  LQ + GV+ A V LA EEA++ +DP ++   +++E I + GF   LI
Sbjct: 141 MTCTSCSSNVQSVLQSLRGVQIAQVALATEEAEIRYDPKIISYTQLMETISNTGFNPILI 200

Query: 61  NSRNDDMNKV 70
            S+ + ++K+
Sbjct: 201 -SKGEHISKI 209



 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 43/57 (75%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEA 57
           MTC +C+ SVE A++ + G+++AVV +  ++A+VL+ P +V+   + +AIEDAGFEA
Sbjct: 62  MTCAACAGSVEKAIKRLPGIREAVVDVLNDKAQVLYLPTIVNEESIRDAIEDAGFEA 118


>Medtr8g079250.2 | heavy metal P-type ATPase | HC |
           chr8:33897975-33903943 | 20130731
          Length = 706

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 1/70 (1%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTCTSCS +V+  LQ + GV+ A V LA EEA++ +DP ++   +++E I + GF   LI
Sbjct: 141 MTCTSCSSNVQSVLQSLRGVQIAQVALATEEAEIRYDPKIISYTQLMETISNTGFNPILI 200

Query: 61  NSRNDDMNKV 70
            S+ + ++K+
Sbjct: 201 -SKGEHISKI 209



 Score = 60.1 bits (144), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 3/66 (4%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +C+ SVE A++ + G+++AVV +  ++A+VL+ P +V+   + +AIEDAGFEA   
Sbjct: 62  MTCAACAGSVEKAIKRLPGIREAVVDVLNDKAQVLYLPTIVNEESIRDAIEDAGFEA--- 118

Query: 61  NSRNDD 66
            S  DD
Sbjct: 119 KSMEDD 124


>Medtr8g079250.4 | heavy metal P-type ATPase | HC |
           chr8:33897975-33903943 | 20130731
          Length = 706

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 1/70 (1%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTCTSCS +V+  LQ + GV+ A V LA EEA++ +DP ++   +++E I + GF   LI
Sbjct: 141 MTCTSCSSNVQSVLQSLRGVQIAQVALATEEAEIRYDPKIISYTQLMETISNTGFNPILI 200

Query: 61  NSRNDDMNKV 70
            S+ + ++K+
Sbjct: 201 -SKGEHISKI 209



 Score = 60.1 bits (144), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 3/66 (4%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +C+ SVE A++ + G+++AVV +  ++A+VL+ P +V+   + +AIEDAGFEA   
Sbjct: 62  MTCAACAGSVEKAIKRLPGIREAVVDVLNDKAQVLYLPTIVNEESIRDAIEDAGFEA--- 118

Query: 61  NSRNDD 66
            S  DD
Sbjct: 119 KSMEDD 124