Miyakogusa Predicted Gene

Lj3g3v3241060.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3241060.1 tr|A9TNF0|A9TNF0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_171041,27.68,0.00000000000001,POZ domain,BTB/POZ fold;
BTB,BTB/POZ-like; no description,BTB/POZ fold; SUBFAMILY NOT
NAMED,NULL; FA,CUFF.45500.1
         (466 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC | chr8:105286...   583   e-166
Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC | chr8:105286...   552   e-157
Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC | chr8:105286...   552   e-157
Medtr4g088460.1 | BTB/POZ domain protein | LC | chr4:35082007-35...   139   5e-33

>Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC |
           chr8:10528673-10524289 | 20130731
          Length = 551

 Score =  583 bits (1502), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 313/529 (59%), Positives = 362/529 (68%), Gaps = 71/529 (13%)

Query: 7   SCGADFGFAFNHNNFSDAVLRIEIMTDPVD------SATAIADCLCQGKRKR-------- 52
           S  ADFGFAFN +NFSD VLRIEIM DPVD      + T+IAD     KR+R        
Sbjct: 25  SSDADFGFAFNDSNFSDRVLRIEIMADPVDPQPDSENCTSIADWARHRKRRREDIKKENV 84

Query: 53  ----DEELF---------------------------PSG-------------------TI 62
               DE++                            PSG                    +
Sbjct: 85  GDLPDEQILNGNQPDMDDCVASENQEEEVVAMVEESPSGDEAVNDNDEPNLGMDYSEPAV 144

Query: 63  VRVETLHISSTILADKSPFFFKLF--WMKE---LNQTLKINASEEAAFMELLNFMYCNTL 117
           VRV+TLHISS ILA KSPFF+KLF   M+E    + TL+INASEEAA MELLNFMY NTL
Sbjct: 145 VRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALMELLNFMYSNTL 204

Query: 118 IVTAAPALLDVLVTADKFEVSSCMRYCTQLLLNFPMTPESALRYLELPDTVLMADAIQPL 177
            +  AP LLDVL+ ADKFEV+SCMRYC++LL N  MTPESAL YLELP +VLMADA+QPL
Sbjct: 205 SIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTPESALLYLELPSSVLMADAVQPL 264

Query: 178 VDAAKQYVVGRYKNITKFQEEVMALPLSGIEAILASDDLQVPSEDAVYDFVLKWARKHYN 237
            DAAKQY+  RYK+ITKFQEEVM LPL+G+EAIL+SDDLQV SEDAVYDFVLKWAR  Y 
Sbjct: 265 TDAAKQYLASRYKDITKFQEEVMNLPLAGVEAILSSDDLQVASEDAVYDFVLKWARHQYG 324

Query: 238 KQTERRGVLSTRLVCLIRFPYMTCRKLREVLSCIDFRHKDVFELVREALIFKAEAPHGQW 297
              ERR VL  RL   IRFP+MTCRKL++VL+C DF H    +LV EAL FKAE PH Q 
Sbjct: 325 NLEERREVLGLRLARFIRFPHMTCRKLKKVLTCSDFEHDVSSKLVLEALFFKAEVPHRQR 384

Query: 298 LLAAKEPVSLKHRFVQRAYKYHSVKVVKFELPQQRCVVYLDLKQEECASLFPSGRLSSQA 357
            LAA+EP     RF++RAYKY  VKVV+FELP+Q+CVVYLDLK+EEC++LFPSGR+ SQA
Sbjct: 385 SLAAEEPACSSRRFLERAYKYRPVKVVEFELPRQQCVVYLDLKREECSNLFPSGRVYSQA 444

Query: 358 FHLGGQWYFLSAQCNLDQHDSFHCFELFVAMKRNGPGGFALVECEFAVRCKPTEEFVVSK 417
           FHLGGQ +FLSA CN+DQ  SFHCF LF+ M+  G   F  V+ EFA R +PTEEF VSK
Sbjct: 445 FHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFT-VDYEFAARSRPTEEF-VSK 502

Query: 418 KMAKKKFTGGDMFGRRNLFATPWTSFIADDSPFFINGVLHLKAELTIRH 466
                 FTGG   G RNLFA PWTSF+A+D  +FINGVLHL+AELTIR 
Sbjct: 503 YKGNYTFTGGKAVGYRNLFAIPWTSFMAEDCLYFINGVLHLRAELTIRQ 551


>Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC |
           chr8:10528628-10524338 | 20130731
          Length = 591

 Score =  552 bits (1423), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/411 (67%), Positives = 320/411 (77%), Gaps = 7/411 (1%)

Query: 61  TIVRVETLHISSTILADKSPFFFKLF--WMKE---LNQTLKINASEEAAFMELLNFMYCN 115
            +VRV+TLHISS ILA KSPFF+KLF   M+E    + TL+INASEEAA MELLNFMY N
Sbjct: 183 AVVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALMELLNFMYSN 242

Query: 116 TLIVTAAPALLDVLVTADKFEVSSCMRYCTQLLLNFPMTPESALRYLELPDTVLMADAIQ 175
           TL +  AP LLDVL+ ADKFEV+SCMRYC++LL N  MTPESAL YLELP +VLMADA+Q
Sbjct: 243 TLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTPESALLYLELPSSVLMADAVQ 302

Query: 176 PLVDAAKQYVVGRYKNITKFQEEVMALPLSGIEAILASDDLQVPSEDAVYDFVLKWARKH 235
           PL DAAKQY+  RYK+ITKFQEEVM LPL+G+EAIL+SDDLQV SEDAVYDFVLKWAR  
Sbjct: 303 PLTDAAKQYLASRYKDITKFQEEVMNLPLAGVEAILSSDDLQVASEDAVYDFVLKWARHQ 362

Query: 236 YNKQTERRGVLSTRLVCLIRFPYMTCRKLREVLSCIDFRHKDVFELVREALIFKAEAPHG 295
           Y    ERR VL  RL   IRFP+MTCRKL++VL+C DF H    +LV EAL FKAE PH 
Sbjct: 363 YGNLEERREVLGLRLARFIRFPHMTCRKLKKVLTCSDFEHDVSSKLVLEALFFKAEVPHR 422

Query: 296 QWLLAAKEPVSLKHRFVQRAYKYHSVKVVKFELPQQRCVVYLDLKQEECASLFPSGRLSS 355
           Q  LAA+EP     RF++RAYKY  VKVV+FELP+Q+CVVYLDLK+EEC++LFPSGR+ S
Sbjct: 423 QRSLAAEEPACSSRRFLERAYKYRPVKVVEFELPRQQCVVYLDLKREECSNLFPSGRVYS 482

Query: 356 QAFHLGGQWYFLSAQCNLDQHDSFHCFELFVAMKRNGPGGFALVECEFAVRCKPTEEFVV 415
           QAFHLGGQ +FLSA CN+DQ  SFHCF LF+ M+  G   F  V+ EFA R +PTEEF V
Sbjct: 483 QAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFT-VDYEFAARSRPTEEF-V 540

Query: 416 SKKMAKKKFTGGDMFGRRNLFATPWTSFIADDSPFFINGVLHLKAELTIRH 466
           SK      FTGG   G RNLFA PWTSF+A+D  +FINGVLHL+AELTIR 
Sbjct: 541 SKYKGNYTFTGGKAVGYRNLFAIPWTSFMAEDCLYFINGVLHLRAELTIRQ 591



 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 37/54 (68%), Gaps = 6/54 (11%)

Query: 7  SCGADFGFAFNHNNFSDAVLRIEIMTDPVD------SATAIADCLCQGKRKRDE 54
          S  ADFGFAFN +NFSD VLRIEIM DPVD      + T+IAD     KR+R++
Sbjct: 25 SSDADFGFAFNDSNFSDRVLRIEIMADPVDPQPDSENCTSIADWARHRKRRRED 78


>Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC |
           chr8:10528673-10524338 | 20130731
          Length = 559

 Score =  552 bits (1422), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/411 (67%), Positives = 320/411 (77%), Gaps = 7/411 (1%)

Query: 61  TIVRVETLHISSTILADKSPFFFKLF--WMKE---LNQTLKINASEEAAFMELLNFMYCN 115
            +VRV+TLHISS ILA KSPFF+KLF   M+E    + TL+INASEEAA MELLNFMY N
Sbjct: 151 AVVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALMELLNFMYSN 210

Query: 116 TLIVTAAPALLDVLVTADKFEVSSCMRYCTQLLLNFPMTPESALRYLELPDTVLMADAIQ 175
           TL +  AP LLDVL+ ADKFEV+SCMRYC++LL N  MTPESAL YLELP +VLMADA+Q
Sbjct: 211 TLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTPESALLYLELPSSVLMADAVQ 270

Query: 176 PLVDAAKQYVVGRYKNITKFQEEVMALPLSGIEAILASDDLQVPSEDAVYDFVLKWARKH 235
           PL DAAKQY+  RYK+ITKFQEEVM LPL+G+EAIL+SDDLQV SEDAVYDFVLKWAR  
Sbjct: 271 PLTDAAKQYLASRYKDITKFQEEVMNLPLAGVEAILSSDDLQVASEDAVYDFVLKWARHQ 330

Query: 236 YNKQTERRGVLSTRLVCLIRFPYMTCRKLREVLSCIDFRHKDVFELVREALIFKAEAPHG 295
           Y    ERR VL  RL   IRFP+MTCRKL++VL+C DF H    +LV EAL FKAE PH 
Sbjct: 331 YGNLEERREVLGLRLARFIRFPHMTCRKLKKVLTCSDFEHDVSSKLVLEALFFKAEVPHR 390

Query: 296 QWLLAAKEPVSLKHRFVQRAYKYHSVKVVKFELPQQRCVVYLDLKQEECASLFPSGRLSS 355
           Q  LAA+EP     RF++RAYKY  VKVV+FELP+Q+CVVYLDLK+EEC++LFPSGR+ S
Sbjct: 391 QRSLAAEEPACSSRRFLERAYKYRPVKVVEFELPRQQCVVYLDLKREECSNLFPSGRVYS 450

Query: 356 QAFHLGGQWYFLSAQCNLDQHDSFHCFELFVAMKRNGPGGFALVECEFAVRCKPTEEFVV 415
           QAFHLGGQ +FLSA CN+DQ  SFHCF LF+ M+  G   F  V+ EFA R +PTEEF V
Sbjct: 451 QAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFT-VDYEFAARSRPTEEF-V 508

Query: 416 SKKMAKKKFTGGDMFGRRNLFATPWTSFIADDSPFFINGVLHLKAELTIRH 466
           SK      FTGG   G RNLFA PWTSF+A+D  +FINGVLHL+AELTIR 
Sbjct: 509 SKYKGNYTFTGGKAVGYRNLFAIPWTSFMAEDCLYFINGVLHLRAELTIRQ 559



 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 37/54 (68%), Gaps = 6/54 (11%)

Query: 7  SCGADFGFAFNHNNFSDAVLRIEIMTDPVD------SATAIADCLCQGKRKRDE 54
          S  ADFGFAFN +NFSD VLRIEIM DPVD      + T+IAD     KR+R++
Sbjct: 25 SSDADFGFAFNDSNFSDRVLRIEIMADPVDPQPDSENCTSIADWARHRKRRRED 78


>Medtr4g088460.1 | BTB/POZ domain protein | LC |
           chr4:35082007-35083494 | 20130731
          Length = 362

 Score =  139 bits (351), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/177 (48%), Positives = 105/177 (59%), Gaps = 14/177 (7%)

Query: 11  DFGFAFNHNNFSDAVLRIEIMTDPVDSATAIADCLCQGKRKRDEELFPSGTIVRVETLHI 70
           D G AF++N F    L I+IM +    A    D   Q           S   V+V T+ I
Sbjct: 15  DVGSAFDYNIFLGRTLHIDIMGENGGEAANADDANLQ---------MDSSIAVKVITMQI 65

Query: 71  SSTILADKSPFFFKLF--WMKELNQT---LKINASEEAAFMELLNFMYCNTLIVTAAPAL 125
           SS ILA KSP FFKLF   M+E +QT   L+I ASEEA  + LL FM  N L VT+    
Sbjct: 66  SSAILAAKSPLFFKLFSNGMRESDQTHVTLRITASEEAPVIALLKFMNTNILNVTSPLVF 125

Query: 126 LDVLVTADKFEVSSCMRYCTQLLLNFPMTPESALRYLELPDTVLMADAIQPLVDAAK 182
           L+VLV ADKFEV+SC+R+C QLLL+  MT E  L YL+LP +VLM D +QPL DA K
Sbjct: 126 LEVLVAADKFEVASCLRHCNQLLLSISMTLEFVLPYLDLPSSVLMDDGVQPLTDAKK 182



 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 66/128 (51%), Gaps = 28/128 (21%)

Query: 314 RAYKYHSVKVVKFELPQQRCVVYLDLKQEECASLFPSGRLSSQAFHLGGQWYFLSAQCNL 373
           R+Y Y  VKV+KFE P Q+C+VYLDLK+EECASLFP G++  Q FHLG            
Sbjct: 205 RSYLYRHVKVMKFESPCQQCIVYLDLKREECASLFPYGKVYFQIFHLG------------ 252

Query: 374 DQHDSFHCFELFVAMKRNGPGGFALVECEFAVRCKPTEEFVVSKKMAKKKFTGGDMFGRR 433
                         M+  G    A V+ EFA R KP ++F  +K   K  FT     G  
Sbjct: 253 --------------MQEKGSVSLA-VDYEFAARSKPAKKFF-TKYKGKYTFTREMTIGYG 296

Query: 434 NLFATPWT 441
           NLF  PWT
Sbjct: 297 NLFTIPWT 304