Miyakogusa Predicted Gene

Lj3g3v3237920.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3237920.2 Non Characterized Hit- tr|I1LQJ5|I1LQJ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16810
PE,82.31,0,MMR_HSR1,GTP binding domain; no description,NULL; no
description,K homology domain-like, alpha/beta;,CUFF.45517.2
         (647 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g065030.1 | GTPase Der protein | HC | chr4:24379001-243866...   927   0.0  
Medtr4g065030.3 | GTPase Der protein | HC | chr4:24379001-243866...   927   0.0  
Medtr4g065030.2 | GTPase Der protein | HC | chr4:24379001-243866...   927   0.0  
Medtr4g134500.1 | ribosome-associated GTPase EngA | HC | chr4:56...   212   1e-54
Medtr3g073790.1 | tRNA modification GTPase trmE | HC | chr3:3330...    82   1e-15
Medtr8g077125.1 | GTP-binding protein Era protein | HC | chr8:32...    57   4e-08

>Medtr4g065030.1 | GTPase Der protein | HC | chr4:24379001-24386634
           | 20130731
          Length = 646

 Score =  927 bits (2396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/608 (77%), Positives = 513/608 (84%), Gaps = 16/608 (2%)

Query: 29  ALSPRKSIFIPRRSLSRPVLRFSSAEFSGSVDDDEEPDQFD---YPEEXXXXXXXLALEQ 85
           +LS  KSI +PRRSLSR          S + +DDE P++ +              +ALE+
Sbjct: 41  SLSQPKSISLPRRSLSR----------SATDNDDELPEELENQIDDYSDDDDVDVIALER 90

Query: 86  EAKDAVLEYSSSLDHVLTIEDE-IDLKETAQTHXXXXXXXXXIIPDRLLPRVAIVGRPNV 144
           EAK+  LEYSSSL  VLTIEDE  D+KET + +         IIPD LLPR+AIVGRPNV
Sbjct: 91  EAKEVALEYSSSLSRVLTIEDERSDVKETGK-NSKRSKPKRKIIPDNLLPRIAIVGRPNV 149

Query: 145 GKSALFNRFVGGNKAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVLTVSKSQSAVMEE 204
           GKSALFNR VGGNKAIVVDEPGVTRDRLYGRSYWG++EFMVVDTGGVLTVSKSQ+ VME+
Sbjct: 150 GKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSYWGDNEFMVVDTGGVLTVSKSQTTVMED 209

Query: 205 LAITTTIGMDGIPLVSREAAVARMPSMIERQATAAIEESSVIVFVVDGQAGLTAADEEIA 264
           L I+TTIGMDGIPL SREAAVARMPSMIERQA AA+EES VI+F+VDGQAGLTAAD EIA
Sbjct: 210 LDISTTIGMDGIPLASREAAVARMPSMIERQAIAAVEESPVIIFLVDGQAGLTAADVEIA 269

Query: 265 DWLRKYYSKKYIILAVNKCESPRKRIMQASEFWSLGFEPIPISAISGTGTGELLDLVCSG 324
           DWLRK YS K IILAVNKCESPRKRIMQ SEFWSLG EPIPISAISGTGTG+LLDLVCSG
Sbjct: 270 DWLRKNYSNKSIILAVNKCESPRKRIMQVSEFWSLGLEPIPISAISGTGTGDLLDLVCSG 329

Query: 325 LKKVEEPKNL-DEEDYVPSISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEF 383
           L+KVEEP+NL +EEDYVP+ISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEF
Sbjct: 330 LQKVEEPQNLVEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEF 389

Query: 384 TGVDGQKFRLIDTAGIRRRAAVVSAGSTTEALSGNRAFRAIRRSDIVALVIEALSCITEQ 443
           TG DGQKF LIDTAGIR+R  V SAGSTTEALS NRAFRAIRRSD+VALVIEA++CITEQ
Sbjct: 390 TGPDGQKFHLIDTAGIRKRTTVASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 449

Query: 444 DFKIAERIEKEGKGCVIVVNKWDTIPNKNQQTATYYEQDVREKLRGLDWAPIVYSTAIAG 503
           D+KIAERIEKEGKGCVIVVNKWDTIPNKNQQTA YYEQDVREKLR LDWAP+VYSTA+AG
Sbjct: 450 DYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTALYYEQDVREKLRLLDWAPVVYSTALAG 509

Query: 504 QSVDKIIDAASEVEKERSRRLGTSILNQVVREALAFXXXXXXXXXXXXXVYYCTQAAIRP 563
           Q+VDKII AA EVEKERSRRLGTSILNQVVREA+ F             VYYCTQAAIRP
Sbjct: 510 QNVDKIIVAAIEVEKERSRRLGTSILNQVVREAVTFKPPPRTRGGKRGRVYYCTQAAIRP 569

Query: 564 PTFVFFVNDSKLFPETYRRYMEKQLRMDAGFSGTPIRLLWRSRRKMGRDEDKAATRTQEN 623
           PTFVFFVND+KLFPETYRR+MEKQLR +AGF GTPIRLLWRSRRKM +DE K ATR +EN
Sbjct: 570 PTFVFFVNDAKLFPETYRRFMEKQLRSNAGFPGTPIRLLWRSRRKMEKDEGKKATRPKEN 629

Query: 624 LTSNDRKI 631
             S+ RK+
Sbjct: 630 FASHRRKL 637


>Medtr4g065030.3 | GTPase Der protein | HC | chr4:24379001-24386603
           | 20130731
          Length = 646

 Score =  927 bits (2396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/608 (77%), Positives = 513/608 (84%), Gaps = 16/608 (2%)

Query: 29  ALSPRKSIFIPRRSLSRPVLRFSSAEFSGSVDDDEEPDQFD---YPEEXXXXXXXLALEQ 85
           +LS  KSI +PRRSLSR          S + +DDE P++ +              +ALE+
Sbjct: 41  SLSQPKSISLPRRSLSR----------SATDNDDELPEELENQIDDYSDDDDVDVIALER 90

Query: 86  EAKDAVLEYSSSLDHVLTIEDE-IDLKETAQTHXXXXXXXXXIIPDRLLPRVAIVGRPNV 144
           EAK+  LEYSSSL  VLTIEDE  D+KET + +         IIPD LLPR+AIVGRPNV
Sbjct: 91  EAKEVALEYSSSLSRVLTIEDERSDVKETGK-NSKRSKPKRKIIPDNLLPRIAIVGRPNV 149

Query: 145 GKSALFNRFVGGNKAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVLTVSKSQSAVMEE 204
           GKSALFNR VGGNKAIVVDEPGVTRDRLYGRSYWG++EFMVVDTGGVLTVSKSQ+ VME+
Sbjct: 150 GKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSYWGDNEFMVVDTGGVLTVSKSQTTVMED 209

Query: 205 LAITTTIGMDGIPLVSREAAVARMPSMIERQATAAIEESSVIVFVVDGQAGLTAADEEIA 264
           L I+TTIGMDGIPL SREAAVARMPSMIERQA AA+EES VI+F+VDGQAGLTAAD EIA
Sbjct: 210 LDISTTIGMDGIPLASREAAVARMPSMIERQAIAAVEESPVIIFLVDGQAGLTAADVEIA 269

Query: 265 DWLRKYYSKKYIILAVNKCESPRKRIMQASEFWSLGFEPIPISAISGTGTGELLDLVCSG 324
           DWLRK YS K IILAVNKCESPRKRIMQ SEFWSLG EPIPISAISGTGTG+LLDLVCSG
Sbjct: 270 DWLRKNYSNKSIILAVNKCESPRKRIMQVSEFWSLGLEPIPISAISGTGTGDLLDLVCSG 329

Query: 325 LKKVEEPKNL-DEEDYVPSISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEF 383
           L+KVEEP+NL +EEDYVP+ISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEF
Sbjct: 330 LQKVEEPQNLVEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEF 389

Query: 384 TGVDGQKFRLIDTAGIRRRAAVVSAGSTTEALSGNRAFRAIRRSDIVALVIEALSCITEQ 443
           TG DGQKF LIDTAGIR+R  V SAGSTTEALS NRAFRAIRRSD+VALVIEA++CITEQ
Sbjct: 390 TGPDGQKFHLIDTAGIRKRTTVASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 449

Query: 444 DFKIAERIEKEGKGCVIVVNKWDTIPNKNQQTATYYEQDVREKLRGLDWAPIVYSTAIAG 503
           D+KIAERIEKEGKGCVIVVNKWDTIPNKNQQTA YYEQDVREKLR LDWAP+VYSTA+AG
Sbjct: 450 DYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTALYYEQDVREKLRLLDWAPVVYSTALAG 509

Query: 504 QSVDKIIDAASEVEKERSRRLGTSILNQVVREALAFXXXXXXXXXXXXXVYYCTQAAIRP 563
           Q+VDKII AA EVEKERSRRLGTSILNQVVREA+ F             VYYCTQAAIRP
Sbjct: 510 QNVDKIIVAAIEVEKERSRRLGTSILNQVVREAVTFKPPPRTRGGKRGRVYYCTQAAIRP 569

Query: 564 PTFVFFVNDSKLFPETYRRYMEKQLRMDAGFSGTPIRLLWRSRRKMGRDEDKAATRTQEN 623
           PTFVFFVND+KLFPETYRR+MEKQLR +AGF GTPIRLLWRSRRKM +DE K ATR +EN
Sbjct: 570 PTFVFFVNDAKLFPETYRRFMEKQLRSNAGFPGTPIRLLWRSRRKMEKDEGKKATRPKEN 629

Query: 624 LTSNDRKI 631
             S+ RK+
Sbjct: 630 FASHRRKL 637


>Medtr4g065030.2 | GTPase Der protein | HC | chr4:24379001-24386634
           | 20130731
          Length = 646

 Score =  927 bits (2396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/608 (77%), Positives = 513/608 (84%), Gaps = 16/608 (2%)

Query: 29  ALSPRKSIFIPRRSLSRPVLRFSSAEFSGSVDDDEEPDQFD---YPEEXXXXXXXLALEQ 85
           +LS  KSI +PRRSLSR          S + +DDE P++ +              +ALE+
Sbjct: 41  SLSQPKSISLPRRSLSR----------SATDNDDELPEELENQIDDYSDDDDVDVIALER 90

Query: 86  EAKDAVLEYSSSLDHVLTIEDE-IDLKETAQTHXXXXXXXXXIIPDRLLPRVAIVGRPNV 144
           EAK+  LEYSSSL  VLTIEDE  D+KET + +         IIPD LLPR+AIVGRPNV
Sbjct: 91  EAKEVALEYSSSLSRVLTIEDERSDVKETGK-NSKRSKPKRKIIPDNLLPRIAIVGRPNV 149

Query: 145 GKSALFNRFVGGNKAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVLTVSKSQSAVMEE 204
           GKSALFNR VGGNKAIVVDEPGVTRDRLYGRSYWG++EFMVVDTGGVLTVSKSQ+ VME+
Sbjct: 150 GKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSYWGDNEFMVVDTGGVLTVSKSQTTVMED 209

Query: 205 LAITTTIGMDGIPLVSREAAVARMPSMIERQATAAIEESSVIVFVVDGQAGLTAADEEIA 264
           L I+TTIGMDGIPL SREAAVARMPSMIERQA AA+EES VI+F+VDGQAGLTAAD EIA
Sbjct: 210 LDISTTIGMDGIPLASREAAVARMPSMIERQAIAAVEESPVIIFLVDGQAGLTAADVEIA 269

Query: 265 DWLRKYYSKKYIILAVNKCESPRKRIMQASEFWSLGFEPIPISAISGTGTGELLDLVCSG 324
           DWLRK YS K IILAVNKCESPRKRIMQ SEFWSLG EPIPISAISGTGTG+LLDLVCSG
Sbjct: 270 DWLRKNYSNKSIILAVNKCESPRKRIMQVSEFWSLGLEPIPISAISGTGTGDLLDLVCSG 329

Query: 325 LKKVEEPKNL-DEEDYVPSISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEF 383
           L+KVEEP+NL +EEDYVP+ISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEF
Sbjct: 330 LQKVEEPQNLVEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEF 389

Query: 384 TGVDGQKFRLIDTAGIRRRAAVVSAGSTTEALSGNRAFRAIRRSDIVALVIEALSCITEQ 443
           TG DGQKF LIDTAGIR+R  V SAGSTTEALS NRAFRAIRRSD+VALVIEA++CITEQ
Sbjct: 390 TGPDGQKFHLIDTAGIRKRTTVASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 449

Query: 444 DFKIAERIEKEGKGCVIVVNKWDTIPNKNQQTATYYEQDVREKLRGLDWAPIVYSTAIAG 503
           D+KIAERIEKEGKGCVIVVNKWDTIPNKNQQTA YYEQDVREKLR LDWAP+VYSTA+AG
Sbjct: 450 DYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTALYYEQDVREKLRLLDWAPVVYSTALAG 509

Query: 504 QSVDKIIDAASEVEKERSRRLGTSILNQVVREALAFXXXXXXXXXXXXXVYYCTQAAIRP 563
           Q+VDKII AA EVEKERSRRLGTSILNQVVREA+ F             VYYCTQAAIRP
Sbjct: 510 QNVDKIIVAAIEVEKERSRRLGTSILNQVVREAVTFKPPPRTRGGKRGRVYYCTQAAIRP 569

Query: 564 PTFVFFVNDSKLFPETYRRYMEKQLRMDAGFSGTPIRLLWRSRRKMGRDEDKAATRTQEN 623
           PTFVFFVND+KLFPETYRR+MEKQLR +AGF GTPIRLLWRSRRKM +DE K ATR +EN
Sbjct: 570 PTFVFFVNDAKLFPETYRRFMEKQLRSNAGFPGTPIRLLWRSRRKMEKDEGKKATRPKEN 629

Query: 624 LTSNDRKI 631
             S+ RK+
Sbjct: 630 FASHRRKL 637


>Medtr4g134500.1 | ribosome-associated GTPase EngA | HC |
           chr4:56328156-56322710 | 20130731
          Length = 545

 Score =  212 bits (539), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 162/510 (31%), Positives = 256/510 (50%), Gaps = 76/510 (14%)

Query: 133 LPRVAIVGRPNVGKSALFNRFVGGNKAIVVDEP--GVTRDRLYGRSYWGEHEFMVVDTGG 190
           LP V I+GRPNVGKSALFNR +   +A+V + P   VTRD   G +  G   F V+D+ G
Sbjct: 37  LPTVIILGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGVAKLGHLRFRVLDSAG 96

Query: 191 VLTVSKSQSAVMEELAITTTIGMDGIPLVSREAAVARMPSMIERQATAAIEESSVIVFVV 250
           +   + S S +    + T  +                            +  S  ++F+ 
Sbjct: 97  LEAEATSGSILHRTASFTANV----------------------------LSTSHSLLFLT 128

Query: 251 DGQAGLTAADEEIADWLRKYYSKKYIILAVNKCES----PRKRIMQASEFWSLGF-EPIP 305
           D +AGL   D+E+  WLRK   +   IL +NK ES           A+E   LGF +PI 
Sbjct: 129 DARAGLHPLDQEVGKWLRKNAPQLKPILVMNKSESLFDVDGSLASSANEMSRLGFGDPIA 188

Query: 306 ISAISGTGTGELLDLVCSGLKKVEEPKNLDE-----------------EDYVP-SISIVG 347
           ISA +G G   + DL  S L+ V E   L+E                 E  +P  ++IVG
Sbjct: 189 ISAETGLG---MHDLFLS-LQPVLEDYMLNESAKENTCGDESSFPEADESKLPLQLAIVG 244

Query: 348 RPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGVDGQKFRLIDTAGIRRRAAVVS 407
           RPNVGKS++LN L+ EDR +V P +G TRDAI T+F    G+   L+DTAG  +R  +  
Sbjct: 245 RPNVGKSTLLNTLLQEDRVLVGPEAGLTRDAIRTQFE-FQGRTIYLVDTAGWLQRTKLEK 303

Query: 408 AGSTTEALSGNRAFRAIRRSDIVALVIEALSCITEQ------DFKIAERIEKEGKGCVIV 461
             S+   LS  ++ +++ R+ I+ALV++A   ++ +      +  IA R  +EG+G V++
Sbjct: 304 GASS---LSIMQSRKSLLRAHIIALVLDAGEIVSAKRSMKHAEVVIARRAVEEGRGLVVI 360

Query: 462 VNKWDTIPNKNQQTATY------YEQDVREKLRGLDWAPIVYSTAIAGQSVDKIIDAASE 515
           VNK D +  KN ++A+Y       +Q+++  +  +   P+V+ +A+ G+    ++    +
Sbjct: 361 VNKMDLLRGKN-KSASYEQVLEAVQQEIQTIIPQVTGIPVVFISALEGRGRTTVLHQVID 419

Query: 516 VEKERSRRLGTSILNQVVREALAFXXXXXXXXXXXXXVYYCTQAAIRPPTFVFFVNDSKL 575
             ++   RL T+ LN+ +++ ++              + Y TQ   RPPTFV FV+    
Sbjct: 420 TYEKWCTRLSTARLNRWLQKVMS--RHSWKDQAAQPKIKYFTQVKARPPTFVAFVHGKTK 477

Query: 576 FPETYRRYMEKQLRMDAGFSGTPIRLLWRS 605
             +T  R++ K L+ D    G PIR++ RS
Sbjct: 478 LSDTDTRFLTKSLKDDFDLGGIPIRIMQRS 507


>Medtr3g073790.1 | tRNA modification GTPase trmE | HC |
           chr3:33306093-33311427 | 20130731
          Length = 543

 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 13/133 (9%)

Query: 343 ISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGVDGQKFRLIDTAGIRRR 402
           I+IVGRPNVGKSS+LNA    +R IV+ I+GTTRD I+     ++G    L+DTAGIR  
Sbjct: 297 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASIN-INGIPITLLDTAGIRDT 355

Query: 403 AAVVSAGSTTEALSGNRAFRAIRRSDIVALVIEALSCITEQDFKIAERIE--KEGKG--- 457
             +V      E +   R+    R +D++ + + A+   T +D K+ ERI+  KE  G   
Sbjct: 356 DDIV------EKIGVERSEAVARGADLIIMTVSAVEGWTSEDTKLLERIQSAKESTGSST 409

Query: 458 -CVIVVNKWDTIP 469
             ++VVNK D  P
Sbjct: 410 PVILVVNKIDCKP 422


>Medtr8g077125.1 | GTP-binding protein Era protein | HC |
           chr8:32768242-32763709 | 20130731
          Length = 473

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 43/206 (20%)

Query: 129 PDRLLPRVAIVGRPNVGKSALFNRFVGGNKAIVVDEPGVTRDRLYGRSYWGEHEFMVVDT 188
           P+     VA++G+PNVGKS L N+ VG   +IV D+P  TR R+       +++ ++ DT
Sbjct: 114 PNHKSGYVALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRVLCICSGSDYQMVLYDT 173

Query: 189 GGVLTVSKSQSAVMEELAITTTIGMDGIPLVSREAAVARMPSMIERQATAAIEESSVIVF 248
            GVL   +                              ++ SM+ +   +A   +  ++ 
Sbjct: 174 PGVLQEQRH-----------------------------KLDSMMMQNVRSATVNADCVLV 204

Query: 249 VVDGQAGLTAADEEIADWLRKYYSKKYIILAVNKCESPRKRIMQASEF-----WSLGF-- 301
           +VD        DE + + +  +  K   +L +NK     K +++  E      W   F  
Sbjct: 205 LVDACKAPEKIDEVLEEAIGGHKEKPPTLLIMNK-----KDLIKPGEVAKKLEWYTKFTD 259

Query: 302 --EPIPISAISGTGTGELLDLVCSGL 325
             E IP+SA  G G  ++ + + S L
Sbjct: 260 VDEVIPVSAKYGHGVEDVKNWILSKL 285