Miyakogusa Predicted Gene

Lj3g3v3237910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3237910.1 Non Characterized Hit- tr|H0YP37|H0YP37_TAEGU
Uncharacterized protein OS=Taeniopygia guttata
GN=TRAP,53.12,3.6,SNARE-like,Longin-like domain; no description,NULL;
Sybindin,Sybindin-like protein; SYNBINDIN,NULL; ,CUFF.45492.1
         (141 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g103680.1 | trafficking protein particle complex subunit-l...   286   5e-78
Medtr5g075330.3 | trafficking protein particle complex subunit-l...   279   5e-76
Medtr5g075330.2 | trafficking protein particle complex subunit-l...   279   8e-76
Medtr5g075330.1 | trafficking protein particle complex subunit-l...   279   8e-76
Medtr8g095450.1 | trafficking protein particle complex subunit-l...    67   7e-12
Medtr4g048530.1 | trafficking protein particle complex subunit-l...    66   1e-11

>Medtr8g103680.1 | trafficking protein particle complex subunit-like
           protein | LC | chr8:43631208-43629016 | 20130731
          Length = 213

 Score =  286 bits (731), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 133/141 (94%), Positives = 137/141 (97%)

Query: 1   MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGCAGIE 60
           MAA+YSLYIINKSGGLIYYKDYGS+GRMDTND+LRVASLWHSMHAISQQLSPVSGC GIE
Sbjct: 73  MAAVYSLYIINKSGGLIYYKDYGSSGRMDTNDSLRVASLWHSMHAISQQLSPVSGCTGIE 132

Query: 61  LLQADTFDLHCFQSLTGTKFFVVSEPGTQRMESLLKFVYELYTDYVLKNPFYEMEMPIRC 120
           LLQADTFDLHCFQSLTGTKFFVV EPGTQ+MESLLKFVYELYTDYVLKNPFYEMEMPIRC
Sbjct: 133 LLQADTFDLHCFQSLTGTKFFVVCEPGTQQMESLLKFVYELYTDYVLKNPFYEMEMPIRC 192

Query: 121 ELFDINLTQAVQKDRVALLAR 141
           ELFDINL QAVQKDRVALL R
Sbjct: 193 ELFDINLAQAVQKDRVALLGR 213


>Medtr5g075330.3 | trafficking protein particle complex subunit-like
           protein | HC | chr5:32007458-32004338 | 20130731
          Length = 174

 Score =  279 bits (714), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 130/141 (92%), Positives = 138/141 (97%)

Query: 1   MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGCAGIE 60
           MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGC+GIE
Sbjct: 34  MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGCSGIE 93

Query: 61  LLQADTFDLHCFQSLTGTKFFVVSEPGTQRMESLLKFVYELYTDYVLKNPFYEMEMPIRC 120
           LLQADTFDLHCFQSLTGTKFF V EPGTQ++ESLLK+VYELYTDYVLKNPFYE+EMPIRC
Sbjct: 94  LLQADTFDLHCFQSLTGTKFFAVCEPGTQQIESLLKYVYELYTDYVLKNPFYEIEMPIRC 153

Query: 121 ELFDINLTQAVQKDRVALLAR 141
           ELFD+NLTQ+VQKDRVALL +
Sbjct: 154 ELFDMNLTQSVQKDRVALLGQ 174


>Medtr5g075330.2 | trafficking protein particle complex subunit-like
           protein | HC | chr5:32007498-32004338 | 20130731
          Length = 141

 Score =  279 bits (713), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 130/141 (92%), Positives = 138/141 (97%)

Query: 1   MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGCAGIE 60
           MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGC+GIE
Sbjct: 1   MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGCSGIE 60

Query: 61  LLQADTFDLHCFQSLTGTKFFVVSEPGTQRMESLLKFVYELYTDYVLKNPFYEMEMPIRC 120
           LLQADTFDLHCFQSLTGTKFF V EPGTQ++ESLLK+VYELYTDYVLKNPFYE+EMPIRC
Sbjct: 61  LLQADTFDLHCFQSLTGTKFFAVCEPGTQQIESLLKYVYELYTDYVLKNPFYEIEMPIRC 120

Query: 121 ELFDINLTQAVQKDRVALLAR 141
           ELFD+NLTQ+VQKDRVALL +
Sbjct: 121 ELFDMNLTQSVQKDRVALLGQ 141


>Medtr5g075330.1 | trafficking protein particle complex subunit-like
           protein | HC | chr5:32007507-32004338 | 20130731
          Length = 141

 Score =  279 bits (713), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 130/141 (92%), Positives = 138/141 (97%)

Query: 1   MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGCAGIE 60
           MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGC+GIE
Sbjct: 1   MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGCSGIE 60

Query: 61  LLQADTFDLHCFQSLTGTKFFVVSEPGTQRMESLLKFVYELYTDYVLKNPFYEMEMPIRC 120
           LLQADTFDLHCFQSLTGTKFF V EPGTQ++ESLLK+VYELYTDYVLKNPFYE+EMPIRC
Sbjct: 61  LLQADTFDLHCFQSLTGTKFFAVCEPGTQQIESLLKYVYELYTDYVLKNPFYEIEMPIRC 120

Query: 121 ELFDINLTQAVQKDRVALLAR 141
           ELFD+NLTQ+VQKDRVALL +
Sbjct: 121 ELFDMNLTQSVQKDRVALLGQ 141


>Medtr8g095450.1 | trafficking protein particle complex subunit-like
           protein | HC | chr8:39949424-39945171 | 20130731
          Length = 171

 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 15/141 (10%)

Query: 7   LYIINKSGGLIYYKDYGSAGRM--DTNDTLRVASLWHSMHAISQQLSPVS---GCAGIEL 61
           LY+ N++G  + YK++           D   +  L  S+ +++ ++ P S   G  G+  
Sbjct: 28  LYVFNRNGICLLYKEWNRPLHTLNPHQDHKLMFGLLFSLKSLTAKIDPTSPQKGNLGVPQ 87

Query: 62  LQADTFDLHCFQSLT----------GTKFFVVSEPGTQRMESLLKFVYELYTDYVLKNPF 111
           L       H F++ T          G K  +V+ P T  +   LK++Y LY +YV+KNP 
Sbjct: 88  LPGQGCSFHTFRTNTYKLTFMETPSGIKIILVTHPRTGDLRESLKYIYNLYVEYVVKNPL 147

Query: 112 YEMEMPIRCELFDINLTQAVQ 132
           Y    PIR ELF+  L Q V+
Sbjct: 148 YTPGSPIRSELFNTTLDQYVR 168


>Medtr4g048530.1 | trafficking protein particle complex subunit-like
           protein | HC | chr4:17221969-17227053 | 20130731
          Length = 169

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 15/141 (10%)

Query: 7   LYIINKSGGLIYYKDYGSAGRM--DTNDTLRVASLWHSMHAISQQLSPVS---GCAGIEL 61
           LY+ N++G  + Y+++           D   +  L  S+ +++ ++ P S   G  G+  
Sbjct: 26  LYVFNRNGICLLYREWNRPLHTLNAQQDHKLMFGLLFSLKSLTAKMDPTSAEKGNLGVPQ 85

Query: 62  L----------QADTFDLHCFQSLTGTKFFVVSEPGTQRMESLLKFVYELYTDYVLKNPF 111
           L          + +T+ L   +S +G K  +V+ P T  +   LK++Y LY +YV+KNP 
Sbjct: 86  LPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVVKNPL 145

Query: 112 YEMEMPIRCELFDINLTQAVQ 132
           Y    PIR ELF+  L Q V+
Sbjct: 146 YTPGSPIRSELFNTTLDQYVR 166