Miyakogusa Predicted Gene

Lj3g3v3213220.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3213220.3 Non Characterized Hit- tr|H9H6E0|H9H6E0_MONDO
Uncharacterized protein OS=Monodelphis domestica
GN=NU,35.2,2e-18,NUDIX,NUDIX hydrolase domain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no description,NUDIX ,CUFF.45459.3
         (249 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g062130.1 | nudix hydrolase-like protein | HC | chr4:23053...   410   e-115
Medtr4g062130.2 | nudix hydrolase-like protein | HC | chr4:23053...   409   e-114

>Medtr4g062130.1 | nudix hydrolase-like protein | HC |
           chr4:23053591-23049503 | 20130731
          Length = 303

 Score =  410 bits (1055), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/228 (86%), Positives = 205/228 (89%)

Query: 22  QYGGCALYTGGASDHEPHLCLHLGLTDYRTFVGTNLSPLWERFLIPSEDDSVICQHTSRA 81
           +YGG  L+TGG S  EPH+CLHLGLTDYRTFVGTNLSPLWERFL+ SEDDSV+CQHTS  
Sbjct: 76  RYGGHVLHTGGESGSEPHVCLHLGLTDYRTFVGTNLSPLWERFLVSSEDDSVLCQHTSSP 135

Query: 82  LGNGAVVETIDKKILVLQRSNNVGEFPGYFVFLGGHPEPQEVGIASHQHVRELMESINIK 141
           LGNGAVVETID KILVLQRSNNVGEFPGYFVF GGHPEPQEVGI S Q+ +EL ESINIK
Sbjct: 136 LGNGAVVETIDSKILVLQRSNNVGEFPGYFVFPGGHPEPQEVGITSRQYAKELTESINIK 195

Query: 142 VSQEMFDSIVREVVEEIGVPASSLSNPAFIGISRRDLNVRPAAFFFIKCNLDSKEVQQFY 201
           VSQEMFDSIVREVVEEIGVPASSLS PAFIGISRRDLNVRP AFFFIKCNLDSKEVQQFY
Sbjct: 196 VSQEMFDSIVREVVEEIGVPASSLSIPAFIGISRRDLNVRPTAFFFIKCNLDSKEVQQFY 255

Query: 202 SSAQDGYESTQLYAFPMDELEKMASRMPGCHRGGFALYKLMVDTMKIT 249
            SA DGYEST+LY  PM ELE MASRMPGCHRGGFALYKLMVDT KIT
Sbjct: 256 FSALDGYESTKLYTVPMIELENMASRMPGCHRGGFALYKLMVDTRKIT 303


>Medtr4g062130.2 | nudix hydrolase-like protein | HC |
           chr4:23053591-23049503 | 20130731
          Length = 253

 Score =  409 bits (1052), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 197/228 (86%), Positives = 205/228 (89%)

Query: 22  QYGGCALYTGGASDHEPHLCLHLGLTDYRTFVGTNLSPLWERFLIPSEDDSVICQHTSRA 81
           +YGG  L+TGG S  EPH+CLHLGLTDYRTFVGTNLSPLWERFL+ SEDDSV+CQHTS  
Sbjct: 26  RYGGHVLHTGGESGSEPHVCLHLGLTDYRTFVGTNLSPLWERFLVSSEDDSVLCQHTSSP 85

Query: 82  LGNGAVVETIDKKILVLQRSNNVGEFPGYFVFLGGHPEPQEVGIASHQHVRELMESINIK 141
           LGNGAVVETID KILVLQRSNNVGEFPGYFVF GGHPEPQEVGI S Q+ +EL ESINIK
Sbjct: 86  LGNGAVVETIDSKILVLQRSNNVGEFPGYFVFPGGHPEPQEVGITSRQYAKELTESINIK 145

Query: 142 VSQEMFDSIVREVVEEIGVPASSLSNPAFIGISRRDLNVRPAAFFFIKCNLDSKEVQQFY 201
           VSQEMFDSIVREVVEEIGVPASSLS PAFIGISRRDLNVRP AFFFIKCNLDSKEVQQFY
Sbjct: 146 VSQEMFDSIVREVVEEIGVPASSLSIPAFIGISRRDLNVRPTAFFFIKCNLDSKEVQQFY 205

Query: 202 SSAQDGYESTQLYAFPMDELEKMASRMPGCHRGGFALYKLMVDTMKIT 249
            SA DGYEST+LY  PM ELE MASRMPGCHRGGFALYKLMVDT KIT
Sbjct: 206 FSALDGYESTKLYTVPMIELENMASRMPGCHRGGFALYKLMVDTRKIT 253