Miyakogusa Predicted Gene
- Lj3g3v3212140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3212140.1 Non Characterized Hit- tr|I1LK10|I1LK10_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23036
PE,42.63,5e-19,seg,NULL,CUFF.45442.1
(249 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g064150.1 | GRAS family transcription factor | HC | chr4:2... 152 4e-37
Medtr4g064180.2 | GRAS family transcription factor | HC | chr4:2... 115 5e-26
Medtr4g064180.1 | GRAS family transcription factor | HC | chr4:2... 115 5e-26
Medtr4g064120.1 | GRAS family transcription factor | HC | chr4:2... 115 6e-26
Medtr2g097410.1 | GRAS family transcription factor | HC | chr2:4... 102 4e-22
>Medtr4g064150.1 | GRAS family transcription factor | HC |
chr4:23914035-23910953 | 20130731
Length = 735
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 145/268 (54%), Gaps = 51/268 (19%)
Query: 1 MDPNFSGTSNFTNSF-RVDEEGSIIVS--DPNQYDAYWDVY------------QQYSSLL 45
MDPNF S+FTN + EE SI+VS DPNQYD+Y D QY S L
Sbjct: 1 MDPNFPPASDFTNGYYHFGEERSILVSEFDPNQYDSYLDADPNQYDSFLEADPNQYDSFL 60
Query: 46 AVNPNGFAGNSNPEEGXXXXXXXXXXXXTEPSLEDSDYFETTKFISQILMDEYGEESPIF 105
+P FA + P EG T+PSLED+D+ +T KFI+QILM+E ++ P +
Sbjct: 61 GADPLDFAATTFPIEGCMASA-------TDPSLEDTDFSDTGKFINQILMEENVDQRPFY 113
Query: 106 DPLSLQLTEKSFHNALFD-------NQYPLNVQSPNGETTXXXXXXXXXXXXXXXXXXXC 158
DPLSLQ+TEKSF++AL NQ+PL++ + +G T+
Sbjct: 114 DPLSLQMTEKSFYDALLHTNKPLSPNQHPLDIHNSDGTTSSNSNSNSSVDDSR------- 166
Query: 159 ELNPPSVNTPVAVIGDHAFQLN------------SHGLLDLDSPVSKPLAALDIFSGADS 206
E P S +TPV+ +H FQ N S+GL DLDS +++ A +IFS ADS
Sbjct: 167 ESKPLSPDTPVSDHVNHVFQFNSPAVSQPHSTGVSNGLRDLDSSITQ--MAQNIFSDADS 224
Query: 207 ESQFRRGLEEATKFLPSPEPRIVTGVES 234
S F + LEEA KFLP P+P++ TG ES
Sbjct: 225 VSLFNKSLEEANKFLP-PQPQLFTGFES 251
>Medtr4g064180.2 | GRAS family transcription factor | HC |
chr4:23923635-23921018 | 20130731
Length = 628
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 101/168 (60%), Gaps = 24/168 (14%)
Query: 74 TEPSLEDSDYFETTKFISQILMDEYGEESPIFDPLSLQLTEKSFHNALFDNQYPLNVQSP 133
T+ S+ED+D+ ET KFI+QILM+E ++ P +DPLSLQ+TEKSFH+AL SP
Sbjct: 23 TDSSMEDTDFSETIKFITQILMEENVDQRPFYDPLSLQITEKSFHDAL----------SP 72
Query: 134 NGETTXXXXXXXXXXXXXXXXXXXCELNPPSVNTPVAVIGDHAFQLN-------SHGLLD 186
NG T+ E P S +TPV+ + +H FQ N S G ++
Sbjct: 73 NGTTSTSCNSNSNSSIDDSH-----ESKPFSPDTPVSDLVNHGFQFNSCASSSVSDGPIN 127
Query: 187 LDSPVSKPLAALDIFSGADSESQFRRGLEEATKFLPSPEPRIVTGVES 234
DS ++ LA +IFS ADS SQF RG EEA KFLP P+P+++TG+ES
Sbjct: 128 FDSSITNMLAE-NIFSNADSVSQFNRGFEEANKFLP-PQPQLLTGLES 173
>Medtr4g064180.1 | GRAS family transcription factor | HC |
chr4:23923635-23921018 | 20130731
Length = 628
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 101/168 (60%), Gaps = 24/168 (14%)
Query: 74 TEPSLEDSDYFETTKFISQILMDEYGEESPIFDPLSLQLTEKSFHNALFDNQYPLNVQSP 133
T+ S+ED+D+ ET KFI+QILM+E ++ P +DPLSLQ+TEKSFH+AL SP
Sbjct: 23 TDSSMEDTDFSETIKFITQILMEENVDQRPFYDPLSLQITEKSFHDAL----------SP 72
Query: 134 NGETTXXXXXXXXXXXXXXXXXXXCELNPPSVNTPVAVIGDHAFQLN-------SHGLLD 186
NG T+ E P S +TPV+ + +H FQ N S G ++
Sbjct: 73 NGTTSTSCNSNSNSSIDDSH-----ESKPFSPDTPVSDLVNHGFQFNSCASSSVSDGPIN 127
Query: 187 LDSPVSKPLAALDIFSGADSESQFRRGLEEATKFLPSPEPRIVTGVES 234
DS ++ LA +IFS ADS SQF RG EEA KFLP P+P+++TG+ES
Sbjct: 128 FDSSITNMLAE-NIFSNADSVSQFNRGFEEANKFLP-PQPQLLTGLES 173
>Medtr4g064120.1 | GRAS family transcription factor | HC |
chr4:23903648-23905939 | 20130731
Length = 628
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 101/168 (60%), Gaps = 24/168 (14%)
Query: 74 TEPSLEDSDYFETTKFISQILMDEYGEESPIFDPLSLQLTEKSFHNALFDNQYPLNVQSP 133
T+ S+ED+D+ ET KFI+QILM+E ++ P +DPLSLQ+TEKSFH+AL SP
Sbjct: 23 TDSSMEDTDFSETIKFITQILMEENVDQRPFYDPLSLQITEKSFHDAL----------SP 72
Query: 134 NGETTXXXXXXXXXXXXXXXXXXXCELNPPSVNTPVAVIGDHAFQLN-------SHGLLD 186
NG T+ E P S +TPV+ + +H FQ N S G ++
Sbjct: 73 NGTTSTSCNSNSNSSIDDSH-----ESKPFSPDTPVSDLVNHGFQFNSCASSSVSDGPIN 127
Query: 187 LDSPVSKPLAALDIFSGADSESQFRRGLEEATKFLPSPEPRIVTGVES 234
DS ++ LA +IFS ADS SQF RG EEA KFLP P+P+++TG+ES
Sbjct: 128 FDSSITNMLAE-NIFSNADSVSQFNRGFEEANKFLP-PQPQLLTGLES 173
>Medtr2g097410.1 | GRAS family transcription factor | HC |
chr2:41596394-41599413 | 20130731
Length = 743
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 130/265 (49%), Gaps = 56/265 (21%)
Query: 1 MDPNFSGTSNFTNSFRVDEEGSIIV-SDPNQYDAYWDVYQQYSSLLAVNPNGFAGNSNPE 59
MDPNF G F +++ D+ G++I+ SDPN NP + G SN E
Sbjct: 1 MDPNFVG---FETTYKFDDHGNLILLSDPNP---------NLDDFTITNP--YVGPSNSE 46
Query: 60 EGXXXXXXXXXXXXTEPSLEDSDYFETTKFISQILMDEYGEESPI--FDPLSLQLTEKSF 117
+ + ED+D+ ET K+ISQILM+E E+ P +DPLSLQ TEK F
Sbjct: 47 -----PLVFSSDTTKDSTFEDADFSETVKYISQILMEEEFEQKPCMCYDPLSLQHTEKIF 101
Query: 118 HNALFDN------QYPLNV-QSPNGETTXXXXXXXXXXXXXXXXXXXCELNPPSVNTPVA 170
+AL N Q+PL+V + PN EL P S +TPV+
Sbjct: 102 FDALESNLPLSPNQHPLDVLEIPNSTCCVTTDSGNSSSSN--------ELKPLSPDTPVS 153
Query: 171 -------------VIGDHAFQLN----SHGLLDLDSPVSKPLAALDIFSGADSESQFRRG 213
++ +H L+ S G+ DLDS ++ +A +IFS ADS QFR+G
Sbjct: 154 GGDSGFNSVKSQFIVPNHGLNLSNSNISDGVFDLDSSETRVMAQ-NIFSDADSILQFRKG 212
Query: 214 LEEATKFLPSPEPRIVTGVESCGES 238
LEEA+KFLP + ++ TG ++ +S
Sbjct: 213 LEEASKFLPQ-KAQLFTGFQNASDS 236