Miyakogusa Predicted Gene

Lj3g3v3201070.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3201070.1 Non Characterized Hit- tr|C6TJX7|C6TJX7_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,28.72,0.0000000003,seg,NULL,CUFF.45435.1
         (284 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g097230.1 | PGR5-like protein 1A, putative | HC | chr2:415...   379   e-105
Medtr4g064030.1 | transmembrane protein, putative | HC | chr4:23...   144   6e-35
Medtr5g011220.1 | PGR5-like protein 1A | HC | chr5:3189399-31865...    65   9e-11
Medtr4g102440.1 | PGR5-like protein 1A | HC | chr4:42460563-4246...    62   8e-10

>Medtr2g097230.1 | PGR5-like protein 1A, putative | HC |
           chr2:41516368-41519630 | 20130731
          Length = 286

 Score =  379 bits (972), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 182/286 (63%), Positives = 220/286 (76%), Gaps = 5/286 (1%)

Query: 1   MAATTSTSHVIQS-TLLELPRTNRLLRISAS-THRVSAISDHRPQGPSCIFVGPLETANK 58
           +A+T+++S  +   T+L++ +      +S+S + R+ A  D RP GPSCI+VGPL+TA +
Sbjct: 4   LASTSNSSTALGGWTVLQVSKIRNNRSVSSSFSLRICATCDDRPHGPSCIYVGPLQTATQ 63

Query: 59  ETLEALYCQTRDAYYSGEPLIVDDMFDRVELKLRWYGSKSVVKYPRCSIRRQSAYADAEE 118
           ETLEALY Q RDAYY GEPLIVDDMFDRVELKL+WYGSKSVVKYPRCSIRRQS YADAEE
Sbjct: 64  ETLEALYSQARDAYYRGEPLIVDDMFDRVELKLKWYGSKSVVKYPRCSIRRQSTYADAEE 123

Query: 119 DISMVFALASTWAVFLAFGSLACLGPLSYTVGTAYQNAFDXXXXXXXXXXXXXXXIMLNN 178
           D+SMVFALAS W +F AFGS A +GP+ Y++  AYQNAF+                M+N 
Sbjct: 124 DLSMVFALASAWTLFFAFGSSAMVGPMFYSISLAYQNAFNLGLSYGSQASELSPLFMVNT 183

Query: 179 IVFIVLGFVIGYPLASASVKVIQGLWRNDLVALRGSCPNCGEEVFAFVRMDRNIDSPHRA 238
           I+F  LGFVIGYP+ASASVK +QGLWRNDL AL+GSCPNCGEEVFAFVR D+  +SPHRA
Sbjct: 184 ILFTALGFVIGYPVASASVKTLQGLWRNDLAALKGSCPNCGEEVFAFVRTDKANNSPHRA 243

Query: 239 DCHVCGCLLEFQTNVENSVSRFGRRWVYGRIFLVSLRGRARRQRQL 284
            CHVC CLLEF+T VE S S FGR+WVYGRI+LV    ++RRQR+L
Sbjct: 244 KCHVCECLLEFRTEVEQSTSIFGRQWVYGRIYLVR---KSRRQREL 286


>Medtr4g064030.1 | transmembrane protein, putative | HC |
           chr4:23888301-23889309 | 20130731
          Length = 141

 Score =  144 bits (364), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 75/144 (52%), Positives = 91/144 (63%), Gaps = 38/144 (26%)

Query: 122 MVFALASTWAVFLAFGSLACLGPLSYTVGTAYQNAFDXXXXXXXXXXXXXXXIMLNNIVF 181
           M  ALASTW +F+AFGSL C+GP+SYTVG AYQNAF                        
Sbjct: 1   MALALASTWTMFIAFGSLVCIGPISYTVGMAYQNAF------------------------ 36

Query: 182 IVLGFVIGYPLASASVKVIQGLWRNDLVALRGSCPNCGEEVFAFVRMDRNIDSPHRADCH 241
                        +SVKV+QGLWRNDLV+L+G+CPNCGEEVFAFVR+DRNIDSPH+    
Sbjct: 37  -------------SSVKVLQGLWRNDLVSLKGACPNCGEEVFAFVRIDRNIDSPHKQIVM 83

Query: 242 -VCGCLLEFQTNVENSVSRFGRRW 264
            VC CLLEF+TN+E  +S F  ++
Sbjct: 84  CVCECLLEFRTNMEVVLSIFSDQF 107


>Medtr5g011220.1 | PGR5-like protein 1A | HC | chr5:3189399-3186523
           | 20130731
          Length = 315

 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 24/186 (12%)

Query: 62  EALYCQTRDAYYSGEPLIVDDMFDRVELKLRWYGSKSVVKYPRCSIRRQSAYADAEEDIS 121
           E  + +   AY SG+PL+ D  FD ++LKL+  GS+ V + PRCS+R +  Y+D   D  
Sbjct: 131 EQKFLEASIAYVSGKPLMSDKEFDELKLKLKMEGSEIVAEGPRCSLRSRKVYSDLTVDYL 190

Query: 122 MVFALASTWAVFLAFGSLACLGPLSYTVGTAYQNAFDXXXXXXXXXXXXXXXIMLNNIVF 181
               L    A  +A G    L  +     T ++  +                I +     
Sbjct: 191 KAL-LLKVPATVIALGLFFFLDDV-----TGFEINY---------------LIAIPEPFS 229

Query: 182 IVLGFVIGYPLASASVKVIQGLWRNDLVALRGSCPNCGEEVFAFVRMDRNI---DSPHRA 238
            +L +    P      + I      D + L+G CPNCG E  +F     +I   DS ++ 
Sbjct: 230 FILTWFAAVPFILWFAQSITNAIIKDFLILKGPCPNCGTENTSFFGTILSISSGDSTNKV 289

Query: 239 DCHVCG 244
            C  CG
Sbjct: 290 KCENCG 295


>Medtr4g102440.1 | PGR5-like protein 1A | HC |
           chr4:42460563-42464677 | 20130731
          Length = 319

 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 24/186 (12%)

Query: 62  EALYCQTRDAYYSGEPLIVDDMFDRVELKLRWYGSKSVVKYPRCSIRRQSAYADAEEDIS 121
           E  + +   AY SG P++ D  +D+++L L+  GS+ VV+ PRCS+R +  Y+D   D  
Sbjct: 139 EQKFLEASMAYVSGNPILTDKEYDKLKLNLKREGSEIVVEGPRCSLRSKKVYSDLSVDYL 198

Query: 122 MVFALASTWAVFLAFGSLACLGPLSYTVGTAYQNAFDXXXXXXXXXXXXXXXIMLNNIVF 181
            +F L +  A  +A G    L  L+          F+                    +  
Sbjct: 199 RMF-LLNVPATVVALGLFFFLDDLT---------GFEITYLLELPEPFSFIFTWFAAVPL 248

Query: 182 IVLGFVIGYPLASASVKVIQGLWRNDLVALRGSCPNCGEEVFAFVRMDRNID---SPHRA 238
           IV    +   L  A +K        D V L+G CPNCG E  +F     +I    S ++ 
Sbjct: 249 IV---YLALSLTRAIIK--------DFVILKGPCPNCGTENTSFFGTILSISSGGSNNKV 297

Query: 239 DCHVCG 244
            C  CG
Sbjct: 298 KCSDCG 303