Miyakogusa Predicted Gene

Lj3g3v3200870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3200870.1 Non Characterized Hit- tr|E1ZAI7|E1ZAI7_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,54.22,7e-19,Tim10-like,Mitochondrial inner membrane
translocase complex, Tim8/9/10/13-zinc finger-like;
MITOCHON,CUFF.45428.1
         (93 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g063925.1 | import inner membrane translocase protein | HC...   179   5e-46
Medtr4g021715.1 | import inner membrane translocase protein | HC...    84   3e-17
Medtr4g021670.1 | plant self-incompatibility protein S1 family p...    53   8e-08

>Medtr4g063925.1 | import inner membrane translocase protein | HC
          | chr4:23812038-23816439 | 20130731
          Length = 93

 Score =  179 bits (454), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 85/93 (91%), Positives = 91/93 (97%)

Query: 1  MDKSMLADMDSLGEADKQRMSTMIDQLQIRDSLRMYNSLVERCFTDCVDTFKHKSLQKQE 60
          MDKSM+ADM++L EADKQRM+TMIDQLQIRDSLRMYN+LVERCF DCVDTFKHKSLQKQE
Sbjct: 1  MDKSMIADMENLPEADKQRMATMIDQLQIRDSLRMYNNLVERCFHDCVDTFKHKSLQKQE 60

Query: 61 ESCVRRCAEKFLKHSMRVGMRFAELNQGAATQD 93
          E+CVRRCAEKFLKHSMRVGMRFAELNQGAATQD
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATQD 93


>Medtr4g021715.1 | import inner membrane translocase protein | HC
          | chr4:7149259-7146659 | 20130731
          Length = 78

 Score = 84.0 bits (206), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 17/93 (18%)

Query: 1  MDKSMLADMDSLGEADKQRMSTMIDQLQIRDSLRMYNSLVERCFTDCVDTFKHKSLQKQE 60
          MDK++  ++D+L E DK+RM+TM++QLQ RDS                 +F   SL K E
Sbjct: 1  MDKNIFGEVDNLPEEDKKRMTTMVEQLQTRDS-----------------SFYRSSLNKPE 43

Query: 61 ESCVRRCAEKFLKHSMRVGMRFAELNQGAATQD 93
          E+CV RCA K+L+ S  VG++F+++NQGA+T D
Sbjct: 44 ETCVLRCAGKYLRFSSHVGVKFSDINQGASTTD 76


>Medtr4g021670.1 | plant self-incompatibility protein S1 family
           protein | LC | chr4:7116535-7115075 | 20130731
          Length = 226

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 15/62 (24%)

Query: 32  SLRMYNSLVERCFTDCVDTFKHKSLQKQEESCVRRCAEKFLKHSMRVGMRFAELNQGAAT 91
           SL +YNSLVERCF +CV TF   SL K                S +V ++F+++NQGA+T
Sbjct: 135 SLGLYNSLVERCFNNCVKTFYRSSLNKL---------------SSQVSVKFSDINQGAST 179

Query: 92  QD 93
            D
Sbjct: 180 TD 181