Miyakogusa Predicted Gene

Lj3g3v3188580.4

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3188580.4 Non Characterized Hit- tr|I1KJX5|I1KJX5_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,63.24,6e-19,no
description,Homeodomain-like; Homeobox,Homeodomain;
Homeodomain-like,Homeodomain-like; Homeodomai,CUFF.45407.4
         (260 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g063735.1 | wuschel-related homeobox protein | HC | chr4:2...   262   2e-70
Medtr8g107210.1 | stenofolia-like protein | HC | chr8:45305362-4...   105   4e-23
Medtr1g019130.2 | wuschel-related homeobox protein | HC | chr1:5...   102   5e-22
Medtr1g019130.1 | wuschel-related homeobox protein | HC | chr1:5...   101   7e-22
Medtr4g084550.1 | wuschel-related homeobox protein | HC | chr4:3...   100   2e-21
Medtr7g060630.1 | wuschel-related homeobox protein | HC | chr7:2...    99   6e-21
Medtr5g021930.1 | wuschel-related homeobox protein | HC | chr5:8...    96   4e-20
Medtr5g081990.1 | wuschel-related homeobox protein | HC | chr5:3...    91   2e-18
Medtr8g095580.1 | wuschel-related homeobox-like protein | HC | c...    83   3e-16
Medtr3g088485.1 | wuschel-related homeobox-like protein | HC | c...    82   6e-16
Medtr2g015000.1 | wuschel homeobox protein | HC | chr2:4393059-4...    70   3e-12
Medtr7g025010.1 | wuschel-related homeobox protein, putative | L...    68   7e-12
Medtr4g088070.1 | wuschel homeobox protein | LC | chr4:34685878-...    65   5e-11
Medtr1g115315.1 | wuschel-related homeobox protein | HC | chr1:5...    65   6e-11
Medtr1g115315.2 | wuschel-related homeobox protein | HC | chr1:5...    65   7e-11
Medtr3g115620.1 | wuschel-related homeobox protein | HC | chr3:5...    63   2e-10
Medtr7g023810.1 | homeodomain protein HB2 | HC | chr7:7798636-77...    60   2e-09
Medtr4g088080.1 | wuschel homeobox protein | LC | chr4:34693672-...    59   5e-09
Medtr6g027390.1 | wuschel-related homeobox protein | HC | chr6:9...    55   7e-08
Medtr7g086940.1 | wuschel-related homeobox protein | HC | chr7:3...    53   2e-07

>Medtr4g063735.1 | wuschel-related homeobox protein | HC |
           chr4:23615955-23617663 | 20130731
          Length = 257

 Score =  262 bits (669), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 142/232 (61%), Positives = 166/232 (71%), Gaps = 8/232 (3%)

Query: 34  RWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQRQK 93
           RWNPTKEQI++LE+LYKQGIKTP+AEEIQ+ITARLRV+GHIEGKNVFYWFQNHKARQRQK
Sbjct: 25  RWNPTKEQISMLENLYKQGIKTPSAEEIQEITARLRVYGHIEGKNVFYWFQNHKARQRQK 84

Query: 94  QKQETIAYFNRFLHRXXXXXXXXXXXXNALCGPYCMPQPNS-EIGFYPQQYSKVLLP-VG 151
           QKQE+IAYFNR LHR            NA+  PYC+PQP S EI +YPQ   KVLLP VG
Sbjct: 85  QKQESIAYFNRLLHR-PQPIYPSPICPNAMRAPYCVPQPQSHEISYYPQN-PKVLLPAVG 142

Query: 152 YRNHHVEKVV--PNGMSSVYNSQLVYDVNMQQRISDHNIHF--NNQETLDLFPLHPTGIL 207
           YR +H EKV+   NGMS++ NS +VY+ NMQQRI + N  F  +NQETLDLFPLHPTGIL
Sbjct: 143 YRRNHAEKVMSNSNGMSNICNSPMVYNENMQQRILNPNYDFGYSNQETLDLFPLHPTGIL 202

Query: 208 EGKTTRTXXXXXXXXXXXXXXXXXXXXXPDINEEDGCPENQPFFDFFNSRQG 259
           EGK+T                        +IN++ G   N+PFFDFFN+  G
Sbjct: 203 EGKSTDQVSSIVSVSADSSTDTHSGSSHHEINQDHGYNGNKPFFDFFNNSAG 254


>Medtr8g107210.1 | stenofolia-like protein | HC |
           chr8:45305362-45303362 | 20130731
          Length = 358

 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 59/69 (85%)

Query: 29  IAASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKA 88
           +  SSRWNPT EQ+  LE LY++G +TP+AE+IQQITA+LR  G IEGKNVFYWFQNHKA
Sbjct: 91  VVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRKFGKIEGKNVFYWFQNHKA 150

Query: 89  RQRQKQKQE 97
           R+RQK++++
Sbjct: 151 RERQKRRRQ 159


>Medtr1g019130.2 | wuschel-related homeobox protein | HC |
           chr1:5704096-5705687 | 20130731
          Length = 228

 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 59/72 (81%)

Query: 29  IAASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKA 88
           I   +RWNPT+EQI +LE LY+ G++TP A++I+QIT +L  +G IEGKNVFYWFQNHKA
Sbjct: 85  IPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKA 144

Query: 89  RQRQKQKQETIA 100
           R+RQKQK+ ++ 
Sbjct: 145 RERQKQKRNSLG 156


>Medtr1g019130.1 | wuschel-related homeobox protein | HC |
           chr1:5704096-5705687 | 20130731
          Length = 236

 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 60/73 (82%)

Query: 28  NIAASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHK 87
           +I   +RWNPT+EQI +LE LY+ G++TP A++I+QIT +L  +G IEGKNVFYWFQNHK
Sbjct: 84  HIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHK 143

Query: 88  ARQRQKQKQETIA 100
           AR+RQKQK+ ++ 
Sbjct: 144 ARERQKQKRNSLG 156


>Medtr4g084550.1 | wuschel-related homeobox protein | HC |
           chr4:32905916-32907479 | 20130731
          Length = 184

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 44/65 (67%), Positives = 57/65 (87%)

Query: 32  SSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQR 91
           SSRW+PT  Q+ +LE LY+QG+KTP+AE+IQQI ++LR  G IEGKNVFYWFQNHKAR+R
Sbjct: 62  SSRWSPTPVQLLVLEELYRQGMKTPSAEQIQQIASQLRQFGKIEGKNVFYWFQNHKARER 121

Query: 92  QKQKQ 96
           QK+++
Sbjct: 122 QKRRR 126


>Medtr7g060630.1 | wuschel-related homeobox protein | HC |
          chr7:21930278-21929162 | 20130731
          Length = 206

 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 54/67 (80%)

Query: 31 ASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQ 90
           SSRW+PT EQ+ +LE LY+ GI+TP+A +IQQIT  L  +G IEGKNVFYWFQNHKAR 
Sbjct: 5  GSSRWSPTTEQLMILEELYRSGIRTPSAVQIQQITTHLSFYGRIEGKNVFYWFQNHKARD 64

Query: 91 RQKQKQE 97
          RQK +++
Sbjct: 65 RQKLRRK 71


>Medtr5g021930.1 | wuschel-related homeobox protein | HC |
          chr5:8555099-8553751 | 20130731
          Length = 302

 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 57/66 (86%), Gaps = 1/66 (1%)

Query: 31 ASSRWNPTKEQITLLESLY-KQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKAR 89
          +S+RW PT +QI +L+ LY   GI++P+AE+IQ+I+ARLR +G IEGKNVFYWFQNHKAR
Sbjct: 27 SSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKAR 86

Query: 90 QRQKQK 95
          +RQK++
Sbjct: 87 ERQKKR 92


>Medtr5g081990.1 | wuschel-related homeobox protein | HC |
          chr5:35185060-35183966 | 20130731
          Length = 184

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 52/63 (82%)

Query: 34 RWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQRQK 93
          RWNPT EQ+ LL  L++ G++TP+ ++IQ+I+ +L  +G IE KNVFYWFQNHKAR+RQK
Sbjct: 33 RWNPTTEQVKLLTELFRAGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQK 92

Query: 94 QKQ 96
          +++
Sbjct: 93 RRK 95


>Medtr8g095580.1 | wuschel-related homeobox-like protein | HC |
           chr8:40005406-40004827 | 20130731
          Length = 165

 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 48/53 (90%)

Query: 45  LESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQRQKQKQE 97
           +E LY++G +TP+AE+IQQITA+LR  G IEGKNVFYWFQNHKAR+RQK++++
Sbjct: 93  VEELYRRGTRTPSAEQIQQITAQLRKIGKIEGKNVFYWFQNHKARERQKRRRQ 145


>Medtr3g088485.1 | wuschel-related homeobox-like protein | HC |
           chr3:40220146-40220726 | 20130731
          Length = 163

 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 47/53 (88%)

Query: 45  LESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQRQKQKQE 97
           +E LY++G +TP AE+IQQITA+LR  G IEGKNVFYWFQNHKAR+RQK++++
Sbjct: 91  VEELYRRGTRTPYAEQIQQITAQLRKFGKIEGKNVFYWFQNHKARERQKRRRQ 143


>Medtr2g015000.1 | wuschel homeobox protein | HC |
           chr2:4393059-4395325 | 20130731
          Length = 457

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 43/62 (69%)

Query: 34  RWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQRQK 93
           RWNP  EQI +LE+++  G+  P  EEI++I A+L+ +G +   NVFYWFQN K+R + K
Sbjct: 55  RWNPKPEQIRILEAIFNSGMVNPPREEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114

Query: 94  QK 95
            +
Sbjct: 115 LR 116


>Medtr7g025010.1 | wuschel-related homeobox protein, putative | LC |
           chr7:8283410-8286927 | 20130731
          Length = 590

 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 42/62 (67%)

Query: 34  RWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQRQK 93
           RWNP  +QI +LE+++  G+  P  EEI +I  +L+  G +   NVFYWFQN K+R +QK
Sbjct: 47  RWNPKPQQIRILEAIFNSGMVNPPREEITKIREQLQEFGQVGDANVFYWFQNRKSRSKQK 106

Query: 94  QK 95
           ++
Sbjct: 107 KR 108


>Medtr4g088070.1 | wuschel homeobox protein | LC |
          chr4:34685878-34688712 | 20130731
          Length = 413

 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 42/67 (62%)

Query: 28 NIAASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHK 87
          N     RW P  EQI +LE++Y  G+K P  +EI++I  +L+  G I   +VFYWFQN K
Sbjct: 23 NPGPRPRWIPKPEQIRILEAIYNSGMKNPPVDEIKKIREQLQEFGQIGDASVFYWFQNRK 82

Query: 88 ARQRQKQ 94
          ++ + K+
Sbjct: 83 SKGKNKK 89


>Medtr1g115315.1 | wuschel-related homeobox protein | HC |
           chr1:52025791-52029215 | 20130731
          Length = 264

 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 41/65 (63%)

Query: 29  IAASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKA 88
           I +  RW PT  Q+ +LE ++ QG  TP+ E+I++I   L  HG I   NV+ WFQN +A
Sbjct: 80  ITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEIATELSQHGQISETNVYNWFQNRRA 139

Query: 89  RQRQK 93
           R ++K
Sbjct: 140 RSKRK 144


>Medtr1g115315.2 | wuschel-related homeobox protein | HC |
           chr1:52025869-52029102 | 20130731
          Length = 262

 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 41/65 (63%)

Query: 29  IAASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKA 88
           I +  RW PT  Q+ +LE ++ QG  TP+ E+I++I   L  HG I   NV+ WFQN +A
Sbjct: 80  ITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEIATELSQHGQISETNVYNWFQNRRA 139

Query: 89  RQRQK 93
           R ++K
Sbjct: 140 RSKRK 144


>Medtr3g115620.1 | wuschel-related homeobox protein | HC |
           chr3:54113734-54116409 | 20130731
          Length = 215

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 41/66 (62%)

Query: 29  IAASSRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKA 88
           I +  RW P   Q+ +LE ++ +G  TPT ++I+ IT  L  HG I   NV+ WFQN +A
Sbjct: 77  ITSRQRWTPMPIQLQILERIFDEGNGTPTKQKIKDITIELGQHGQISETNVYNWFQNRRA 136

Query: 89  RQRQKQ 94
           R ++KQ
Sbjct: 137 RSKRKQ 142


>Medtr7g023810.1 | homeodomain protein HB2 | HC |
           chr7:7798636-7797897 | 20130731
          Length = 183

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 40/62 (64%)

Query: 34  RWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQRQK 93
           RW PT  Q+  LE +++    TP+ E+I++ITA L  HG I   +V+ WFQN +AR + K
Sbjct: 68  RWTPTPVQLQSLERIFEAETGTPSKEKIKEITADLTKHGQISETSVYNWFQNRRARSKGK 127

Query: 94  QK 95
           Q+
Sbjct: 128 QQ 129


>Medtr4g088080.1 | wuschel homeobox protein | LC |
          chr4:34693672-34695281 | 20130731
          Length = 319

 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%)

Query: 34 RWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQNHKARQR 91
          RW P  EQI +LE++Y  G   P  +EI++I  +L   G +   +VFYWFQN K R +
Sbjct: 40 RWIPKPEQIHILEAIYNSGTTNPRRDEIKKIREQLEEFGQVGDSSVFYWFQNRKYRSK 97


>Medtr6g027390.1 | wuschel-related homeobox protein | HC |
          chr6:9379269-9376397 | 20130731
          Length = 300

 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 31/53 (58%)

Query: 33 SRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWFQN 85
          SRW P  EQI +LES++  G+  P  +E  +I   L   G +   NVFYWFQN
Sbjct: 31 SRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQN 83


>Medtr7g086940.1 | wuschel-related homeobox protein | HC |
          chr7:33813041-33816667 | 20130731
          Length = 272

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 30/51 (58%)

Query: 33 SRWNPTKEQITLLESLYKQGIKTPTAEEIQQITARLRVHGHIEGKNVFYWF 83
          SRW P  EQI +LES++  G+  P  EE  +I   L   G++   NVFYWF
Sbjct: 27 SRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGNVGDANVFYWF 77