Miyakogusa Predicted Gene

Lj3g3v3188540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3188540.1 Non Characterized Hit- tr|I1LK36|I1LK36_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1665
PE=,83.52,0,yidC_oxa1_cterm: membrane protein insertase,
YidC/,Membrane insertase OXA1/ALB3/YidC; seg,NULL; 60KD,CUFF.45410.1
         (429 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g063705.1 | 60 kDa inner membrane protein | HC | chr4:2358...   696   0.0  
Medtr3g086250.1 | 60 kDa inner membrane protein | HC | chr3:3902...   388   e-108
Medtr4g089105.1 | 60 kDa inner membrane protein | HC | chr4:3573...    62   8e-10
Medtr4g107330.1 | 60 kDa inner membrane protein | HC | chr4:4435...    58   2e-08

>Medtr4g063705.1 | 60 kDa inner membrane protein | HC |
           chr4:23583081-23577537 | 20130731
          Length = 444

 Score =  696 bits (1797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/433 (80%), Positives = 377/433 (87%), Gaps = 6/433 (1%)

Query: 1   MANTLISSPSFTGTPLPSLPRRHFPHRAARLLTTK--AFHQIPPIHSISHSLDFAGIVAR 58
           MA TLISSPSF GTPLPSL R   P+R  RL T    +FHQIPPI S++HS+D AG+ AR
Sbjct: 1   MAKTLISSPSFIGTPLPSLHRNFSPNRT-RLYTKVHFSFHQIPPIQSLTHSIDVAGVFAR 59

Query: 59  TEGLLYTLXXXXXXXXXXXXXXXXXXXQKNGGWFGFISEAMEYVLKVLKDGLSAVHVPYS 118
            EGLLYTL                   QKNGGWFGFIS+ ME+VLK+LKDGLSAVHVPYS
Sbjct: 60  AEGLLYTLADAAVTADAVTSTSTDVTVQKNGGWFGFISDGMEFVLKILKDGLSAVHVPYS 119

Query: 119 YGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYT 178
           YGFAIILLT+IVKAATLPLTKQQVESTLAMQNLQPKIKAIQ+RYAGNQERIQLETSRLYT
Sbjct: 120 YGFAIILLTLIVKAATLPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYT 179

Query: 179 QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSG 238
           QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSG
Sbjct: 180 QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSG 239

Query: 239 ISWLFPFVDGHPPLGWQDTAAYLVLPILLIATQYVSMEIMKPPQSNDPTQKNTQLIFKFL 298
           ISWLFPFVDGHPPLGW DTAAYLVLP+LLI +QYVSMEIMKPPQ+NDPTQKNT LIFKFL
Sbjct: 240 ISWLFPFVDGHPPLGWYDTAAYLVLPVLLILSQYVSMEIMKPPQTNDPTQKNTLLIFKFL 299

Query: 299 PLMIGYFSLSVPSGLTIYWFTNNLLSTAQQVWLRKLGGAKPVVDENAGGIITAGRAKRSA 358
           PLMIGYFSLSVPSGLTIYWFTNN+LSTAQQ+WLRKLGGAKP V+E+AGGIITAGRAKRS 
Sbjct: 300 PLMIGYFSLSVPSGLTIYWFTNNVLSTAQQIWLRKLGGAKPAVNEDAGGIITAGRAKRSF 359

Query: 359 SQPARAGERFRQSKEEEKNKKLMKALPGEELQPLASA--SDDGSDVESDNKGQEDGEEAY 416
           S+P + GERF Q KEEE+ KKL KALP +E+QPLASA  SDDGSDV+++ K QE  EEAY
Sbjct: 360 SKPEKDGERFTQLKEEERKKKLSKALPADEVQPLASASVSDDGSDVKNE-KEQEVTEEAY 418

Query: 417 ASKVGEEVQSFSR 429
           ASKV +EVQSFSR
Sbjct: 419 ASKVPQEVQSFSR 431


>Medtr3g086250.1 | 60 kDa inner membrane protein | HC |
           chr3:39021780-39028042 | 20130731
          Length = 532

 Score =  388 bits (996), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 195/343 (56%), Positives = 249/343 (72%), Gaps = 23/343 (6%)

Query: 58  RTEGLLYTLXXXXXXXXXXXXXXXXXXXQKNGGWFGFISEAMEYVLKVLKDGLSAVHVPY 117
           R EG LYT+                   ++N  WF  I+  ME +LKVLKDGLS +HVPY
Sbjct: 74  RAEGFLYTIADAAVSSSDIAITTTTA--KQNNDWFSGITNYMEIILKVLKDGLSTLHVPY 131

Query: 118 SYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLY 177
           +YGFAII+LT++VK AT PLT++QVES +AM++LQP++KAIQ++YA +QERIQLET+RLY
Sbjct: 132 AYGFAIIMLTILVKVATFPLTRKQVESAMAMRSLQPQVKAIQKQYARDQERIQLETARLY 191

Query: 178 TQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGS 237
           T A +NPLAGCLP L T PVWIGLY+A SNVA+EGLL EGF WIPSL GPT+IAARQ+GS
Sbjct: 192 TLANINPLAGCLPVLLTTPVWIGLYRAFSNVADEGLLNEGFFWIPSLSGPTTIAARQNGS 251

Query: 238 GISWLFPFVDGHPPLGWQDTAAYLVLPILLIATQYVSMEIMKPPQSNDPTQKNTQLIFKF 297
            ISWLFPFVDGHPPLGW DT AYLVLP+LL+ +QY+S++IM+  Q+  P  K++Q++ K 
Sbjct: 252 AISWLFPFVDGHPPLGWPDTLAYLVLPVLLVVSQYISLQIMQSSQATGPNAKSSQVLNKV 311

Query: 298 LPLMIGYFSLSVPSGLTIYWFTNNLLSTAQQVWLRKLGGAK----PVVDENAGG------ 347
           LPL+IGYF+LSVPSGL++YWFTNN+LST QQ+WL+KLGGAK     V+D+N         
Sbjct: 312 LPLVIGYFALSVPSGLSLYWFTNNILSTLQQIWLQKLGGAKNPLRQVLDDNVKNVDLMQV 371

Query: 348 -----------IITAGRAKRSASQPARAGERFRQSKEEEKNKK 379
                      I  A +  +  S+  R G++F+Q  E+E  KK
Sbjct: 372 QKSVSNLNSTKIEEARKDSKLTSEGPRPGDKFKQLMEQEAKKK 414


>Medtr4g089105.1 | 60 kDa inner membrane protein | HC |
           chr4:35733521-35740788 | 20130731
          Length = 425

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 52/255 (20%)

Query: 97  EAMEYVLKVLKDGLSAVHVPYSYGF--AIILLTVIVKAATLPLTKQQVESTLAMQNLQPK 154
           +A++YV+        AVH+     +  AI L T++++ AT+PL   Q+++T  +  ++P+
Sbjct: 127 QALQYVI-------DAVHLYTGLDWWAAIALTTLVIRTATVPLLVNQLKATSKLTLMRPR 179

Query: 155 IKAIQERYAGN----------QERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQA 204
           ++ I+E   G           QER+    S+L+ + GV P           PV+I  + A
Sbjct: 180 LEQIKEEMDGKTSDPAAVAQGQERM----SKLFKEYGVTPFTPLKGLFIQGPVFISFFLA 235

Query: 205 LSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWQDTAAYLVLP 264
           ++N+A +         +PS              G  W   F D   P       A  + P
Sbjct: 236 ITNMAEK---------MPSF----------KHGGAFW---FTDLTTP------DALYIFP 267

Query: 265 ILLIATQYVSMEI-MKPPQSNDPTQKNTQLIFKFLPLMIGYFSLSVPSGLTIYWFTNNLL 323
           +L   +  + +E  M+     +P     +   + L L+   F+LS P  +  YW T+NL 
Sbjct: 268 VLTALSFLIVVETNMQEGMEGNPMGNTMKKFSRVLALLSVPFTLSFPKAIFCYWITSNLF 327

Query: 324 STAQQVWLRKLGGAK 338
           S    + LR  G  K
Sbjct: 328 SLTYGMVLRTPGVKK 342


>Medtr4g107330.1 | 60 kDa inner membrane protein | HC |
           chr4:44358806-44365844 | 20130731
          Length = 446

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 45/249 (18%)

Query: 103 LKVLKDGLSAVHVPYSYGF--AIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQE 160
           ++VL+  + AVH      +  AI++ T++++ AT+PL   Q+++T  +  ++P+++ ++ 
Sbjct: 137 VQVLQYAIDAVHTYTGLNWWSAIVVTTLLIRIATVPLLINQLKTTSKLTIMRPRLEELKA 196

Query: 161 RYAGN----------QERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVAN 210
              G           QE+++    +L+ + GV P +     L   PV+I  + A++N+A 
Sbjct: 197 EMDGKTFDPQAVAEGQEKMK----QLFKEYGVTPFSPLKGLLIQGPVFISFFLAITNMAE 252

Query: 211 EGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWQDTAAYLVLPILLIAT 270
           +         +PS         +  G+     F F D   P       A  V P+L   +
Sbjct: 253 K---------MPSF--------KHGGA-----FWFTDLTTP------DALYVFPVLTALS 284

Query: 271 QYVSMEI-MKPPQSNDPTQKNTQLIFKFLPLMIGYFSLSVPSGLTIYWFTNNLLSTAQQV 329
             V +E  M+     +P     +   + L  +   F++S P  L  YW T+NL S    +
Sbjct: 285 FLVVVEFNMQEGMEGNPMGDTMKKFSRVLAFLSVPFTMSFPKALFCYWLTSNLFSFTYGM 344

Query: 330 WLRKLGGAK 338
            L+  G  K
Sbjct: 345 VLKVPGVKK 353