Miyakogusa Predicted Gene

Lj3g3v3188470.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3188470.1 Non Characterized Hit- tr|C6SXY4|C6SXY4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55952
PE,95.41,0,UBIQUITIN_CONJUGAT_2,Ubiquitin-conjugating enzyme, E2;
Ubiquitin-conjugating enzyme E2, catalytic d,,CUFF.45396.1
         (109 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g096690.1 | ubiquitin-conjugating enzyme | HC | chr2:41294...   172   8e-44
Medtr4g063490.1 | ubiquitin-conjugating enzyme | HC | chr4:23528...   166   3e-42
Medtr2g096690.2 | ubiquitin-conjugating enzyme | HC | chr2:41294...   165   7e-42
Medtr2g096690.3 | ubiquitin-conjugating enzyme | HC | chr2:41294...    99   8e-22
Medtr8g468530.1 | ubiquitin-conjugating enzyme | HC | chr8:24841...    58   2e-09
Medtr4g108080.3 | ubiquitin-conjugating enzyme | HC | chr4:44796...    58   2e-09
Medtr4g108080.1 | ubiquitin-conjugating enzyme | HC | chr4:44796...    58   2e-09

>Medtr2g096690.1 | ubiquitin-conjugating enzyme | HC |
           chr2:41294217-41289404 | 20130731
          Length = 166

 Score =  172 bits (435), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 82/96 (85%), Positives = 83/96 (86%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           VKFTSEIWHPNVY DGRVCISILHPPGDDPNGYELASERWTPVHTVE            P
Sbjct: 71  VKFTSEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGP 130

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRSQEML 109
           NDESPANVEAAKEWRDRRDDFKKKVSRCVR+SQEML
Sbjct: 131 NDESPANVEAAKEWRDRRDDFKKKVSRCVRKSQEML 166


>Medtr4g063490.1 | ubiquitin-conjugating enzyme | HC |
           chr4:23528203-23525021 | 20130731
          Length = 166

 Score =  166 bits (421), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 78/96 (81%), Positives = 81/96 (84%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVE            P
Sbjct: 71  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSP 130

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRSQEML 109
           NDESPANVEAAK WRD RD+F+KKV RCVR+SQEML
Sbjct: 131 NDESPANVEAAKMWRDNRDEFRKKVGRCVRKSQEML 166


>Medtr2g096690.2 | ubiquitin-conjugating enzyme | HC |
           chr2:41294168-41289530 | 20130731
          Length = 165

 Score =  165 bits (418), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 81/96 (84%), Positives = 82/96 (85%), Gaps = 1/96 (1%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           VKFTSEIWHPNVY DGRVCISILHPPGDDPNGYELASERWTPVHTVE            P
Sbjct: 71  VKFTSEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGP 130

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRSQEML 109
           NDESPANVEAA EWRDRRDDFKKKVSRCVR+SQEML
Sbjct: 131 NDESPANVEAA-EWRDRRDDFKKKVSRCVRKSQEML 165


>Medtr2g096690.3 | ubiquitin-conjugating enzyme | HC |
           chr2:41294174-41289404 | 20130731
          Length = 117

 Score = 99.0 bits (245), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 44/46 (95%), Positives = 45/46 (97%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTV 59
           VKFTSEIWHPNVY DGRVCISILHPPGDDPNGYELASERWTPVHT+
Sbjct: 71  VKFTSEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTL 116


>Medtr8g468530.1 | ubiquitin-conjugating enzyme | HC |
           chr8:24841261-24835625 | 20130731
          Length = 168

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 13/92 (14%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           V+F S ++HPN+Y DG +C+ IL               +W+P++ V             P
Sbjct: 86  VRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDP 132

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRS 105
           N  SPAN EAA+ + + + ++ ++V   V +S
Sbjct: 133 NPNSPANSEAARMFSENKREYNRRVREIVEQS 164


>Medtr4g108080.3 | ubiquitin-conjugating enzyme | HC |
           chr4:44796505-44801289 | 20130731
          Length = 152

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 13/92 (14%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           V+F S ++HPN+Y DG +C+ IL               +W+P++ V             P
Sbjct: 70  VRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDP 116

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRS 105
           N  SPAN EAA+ + + + ++ ++V   V +S
Sbjct: 117 NPNSPANSEAARMFSENKREYNRRVREVVEQS 148


>Medtr4g108080.1 | ubiquitin-conjugating enzyme | HC |
           chr4:44796505-44801289 | 20130731
          Length = 152

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 13/92 (14%)

Query: 14  VKFTSEIWHPNVYTDGRVCISILHPPGDDPNGYELASERWTPVHTVEXXXXXXXXXXXXP 73
           V+F S ++HPN+Y DG +C+ IL               +W+P++ V             P
Sbjct: 70  VRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDP 116

Query: 74  NDESPANVEAAKEWRDRRDDFKKKVSRCVRRS 105
           N  SPAN EAA+ + + + ++ ++V   V +S
Sbjct: 117 NPNSPANSEAARMFSENKREYNRRVREVVEQS 148