Miyakogusa Predicted Gene

Lj3g3v3177310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3177310.1 tr|F2E038|F2E038_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,68.85,1e-17,coiled-coil,NULL,CUFF.45381.1
         (358 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g063570.1 | plant/mmn10-180 protein | HC | chr4:23473194-2...   667   0.0  
Medtr4g063570.3 | plant/mmn10-180 protein | HC | chr4:23473194-2...   475   e-134
Medtr4g063570.2 | plant/mmn10-180 protein | HC | chr4:23473194-2...   474   e-134
Medtr4g063570.4 | plant/mmn10-180 protein | HC | chr4:23473194-2...   379   e-105

>Medtr4g063570.1 | plant/mmn10-180 protein | HC |
           chr4:23473194-23468368 | 20130731
          Length = 358

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/358 (88%), Positives = 338/358 (94%)

Query: 1   MTEAHSPPRTSAYLDALCQAIHKKLQRALANSSQRRNLLQELFADVALEVDDRAKDVIVN 60
           M++A+S PR S YLDAL QAIHKKLQRALANSSQRRNLLQELFADVALEVDDRAKDVI N
Sbjct: 1   MSDANSLPRNSGYLDALSQAIHKKLQRALANSSQRRNLLQELFADVALEVDDRAKDVIFN 60

Query: 61  KEEDAISSAEYVNDGPLCFYDVLADYFVRVPESGKPILDMIVQLWSQSFASHIFALLFHK 120
           KEED IS   Y  DGPLCFYDVLADYFV+VPESGKP+LDMIVQLWSQSFASHIF+LLFHK
Sbjct: 61  KEEDVISPVNYAMDGPLCFYDVLADYFVQVPESGKPVLDMIVQLWSQSFASHIFSLLFHK 120

Query: 121 WLFEVHLDNPDVLLRYSSALVQGATNVFWIDIQTNTRRFQSLFRYLLDDVALHHSRLNKI 180
           W+FEVHLDNP+VLLRYSSALVQGATNVFWIDIQTNTRRFQS+FRYLLDDVAL H+RLNKI
Sbjct: 121 WMFEVHLDNPEVLLRYSSALVQGATNVFWIDIQTNTRRFQSIFRYLLDDVALDHTRLNKI 180

Query: 181 PVQAQRDMYLLLSRFILFYNSAGKLGSFFKQCPVFQTAFLVGGPADIFVTELTDQLLKLK 240
           P+QAQRDMYLLLSRFILFYNSAGK+ SF KQCPVFQTAFLVGGPADIFV ELTDQL KLK
Sbjct: 181 PLQAQRDMYLLLSRFILFYNSAGKVDSFLKQCPVFQTAFLVGGPADIFVNELTDQLQKLK 240

Query: 241 VEPVLLHYLSEIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLF 300
           VEPVLLHYLSEIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAW++LDFLF
Sbjct: 241 VEPVLLHYLSEIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWESLDFLF 300

Query: 301 PVGQYPRHLISLFFRLLYPWYWPSSCWYFAISCLQAIFNSLLRLIFSSWEKIAKPKSQ 358
           PVGQYPRHLISLFFRLLYPWYWPSSCW F ISC++ IF SLLRLIFS+WEK++KPK+Q
Sbjct: 301 PVGQYPRHLISLFFRLLYPWYWPSSCWNFVISCVRTIFYSLLRLIFSTWEKVSKPKTQ 358


>Medtr4g063570.3 | plant/mmn10-180 protein | HC |
           chr4:23473194-23468368 | 20130731
          Length = 265

 Score =  475 bits (1223), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 233/266 (87%), Positives = 245/266 (92%), Gaps = 5/266 (1%)

Query: 1   MTEAHSPPRTSAYLDALCQAIHKKLQRALANSSQRRNLLQELFADVALEVDDRAKDVIVN 60
           M++A+S PR S YLDAL QAIHKKLQRALANSSQRRNLLQELFADVALEVDDRAKDVI N
Sbjct: 1   MSDANSLPRNSGYLDALSQAIHKKLQRALANSSQRRNLLQELFADVALEVDDRAKDVIFN 60

Query: 61  KEEDAISSAEYVNDGPLCFYDVLADYFVRVPESGKPILDMIVQLWSQSFASHIFALLFHK 120
           KEED IS   Y  DGPLCFYDVLADYFV+VPESGKP+LDMIVQLWSQSFASHIF+LLFHK
Sbjct: 61  KEEDVISPVNYAMDGPLCFYDVLADYFVQVPESGKPVLDMIVQLWSQSFASHIFSLLFHK 120

Query: 121 WLFEVHLDNPDVLLRYSSALVQGATNVFWIDIQTNTRRFQSLFRYLLDDVALHHSRLNKI 180
           W+FEVHLDNP+VLLRYSSALVQGATNVFWIDIQTNTRRFQS+FRYLLDDVAL H+RLNKI
Sbjct: 121 WMFEVHLDNPEVLLRYSSALVQGATNVFWIDIQTNTRRFQSIFRYLLDDVALDHTRLNKI 180

Query: 181 PVQAQRDMYLLLSRFILFYNSAGKLGSFFKQCPVFQTAFLVGGPADIFVTELTDQLLKLK 240
           P+QAQRDMYLLLSRFILFYNSAGK+ SF KQCPVFQTAFLVGGPADIFV ELTDQL KLK
Sbjct: 181 PLQAQRDMYLLLSRFILFYNSAGKVDSFLKQCPVFQTAFLVGGPADIFVNELTDQLQKLK 240

Query: 241 VEPVLLHYLSEIKVLQGMELRMTTST 266
           VEPVLLHYLSEIKVLQG     TTST
Sbjct: 241 VEPVLLHYLSEIKVLQG-----TTST 261


>Medtr4g063570.2 | plant/mmn10-180 protein | HC |
           chr4:23473194-23468368 | 20130731
          Length = 266

 Score =  474 bits (1221), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 233/266 (87%), Positives = 245/266 (92%), Gaps = 5/266 (1%)

Query: 1   MTEAHSPPRTSAYLDALCQAIHKKLQRALANSSQRRNLLQELFADVALEVDDRAKDVIVN 60
           M++A+S PR S YLDAL QAIHKKLQRALANSSQRRNLLQELFADVALEVDDRAKDVI N
Sbjct: 1   MSDANSLPRNSGYLDALSQAIHKKLQRALANSSQRRNLLQELFADVALEVDDRAKDVIFN 60

Query: 61  KEEDAISSAEYVNDGPLCFYDVLADYFVRVPESGKPILDMIVQLWSQSFASHIFALLFHK 120
           KEED IS   Y  DGPLCFYDVLADYFV+VPESGKP+LDMIVQLWSQSFASHIF+LLFHK
Sbjct: 61  KEEDVISPVNYAMDGPLCFYDVLADYFVQVPESGKPVLDMIVQLWSQSFASHIFSLLFHK 120

Query: 121 WLFEVHLDNPDVLLRYSSALVQGATNVFWIDIQTNTRRFQSLFRYLLDDVALHHSRLNKI 180
           W+FEVHLDNP+VLLRYSSALVQGATNVFWIDIQTNTRRFQS+FRYLLDDVAL H+RLNKI
Sbjct: 121 WMFEVHLDNPEVLLRYSSALVQGATNVFWIDIQTNTRRFQSIFRYLLDDVALDHTRLNKI 180

Query: 181 PVQAQRDMYLLLSRFILFYNSAGKLGSFFKQCPVFQTAFLVGGPADIFVTELTDQLLKLK 240
           P+QAQRDMYLLLSRFILFYNSAGK+ SF KQCPVFQTAFLVGGPADIFV ELTDQL KLK
Sbjct: 181 PLQAQRDMYLLLSRFILFYNSAGKVDSFLKQCPVFQTAFLVGGPADIFVNELTDQLQKLK 240

Query: 241 VEPVLLHYLSEIKVLQGMELRMTTST 266
           VEPVLLHYLSEIKVLQG     TTST
Sbjct: 241 VEPVLLHYLSEIKVLQG-----TTST 261


>Medtr4g063570.4 | plant/mmn10-180 protein | HC |
           chr4:23473194-23468372 | 20130731
          Length = 213

 Score =  379 bits (973), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/211 (87%), Positives = 194/211 (91%), Gaps = 5/211 (2%)

Query: 56  DVIVNKEEDAISSAEYVNDGPLCFYDVLADYFVRVPESGKPILDMIVQLWSQSFASHIFA 115
           DVI NKEED IS   Y  DGPLCFYDVLADYFV+VPESGKP+LDMIVQLWSQSFASHIF+
Sbjct: 3   DVIFNKEEDVISPVNYAMDGPLCFYDVLADYFVQVPESGKPVLDMIVQLWSQSFASHIFS 62

Query: 116 LLFHKWLFEVHLDNPDVLLRYSSALVQGATNVFWIDIQTNTRRFQSLFRYLLDDVALHHS 175
           LLFHKW+FEVHLDNP+VLLRYSSALVQGATNVFWIDIQTNTRRFQS+FRYLLDDVAL H+
Sbjct: 63  LLFHKWMFEVHLDNPEVLLRYSSALVQGATNVFWIDIQTNTRRFQSIFRYLLDDVALDHT 122

Query: 176 RLNKIPVQAQRDMYLLLSRFILFYNSAGKLGSFFKQCPVFQTAFLVGGPADIFVTELTDQ 235
           RLNKIP+QAQRDMYLLLSRFILFYNSAGK+ SF KQCPVFQTAFLVGGPADIFV ELTDQ
Sbjct: 123 RLNKIPLQAQRDMYLLLSRFILFYNSAGKVDSFLKQCPVFQTAFLVGGPADIFVNELTDQ 182

Query: 236 LLKLKVEPVLLHYLSEIKVLQGMELRMTTST 266
           L KLKVEPVLLHYLSEIKVLQG     TTST
Sbjct: 183 LQKLKVEPVLLHYLSEIKVLQG-----TTST 208