Miyakogusa Predicted Gene

Lj3g3v3155120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3155120.1 Non Characterized Hit- tr|I3S6U2|I3S6U2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.17,0,PTPLA
DOMAIN PROTEIN,Protein-tyrosine phosphatase-like, PTPLA;
PTPLA,Protein-tyrosine phosphatase-li,CUFF.45378.1
         (219 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g060990.1 | tyrosine phosphatase-like protein PTPLB protei...   370   e-103
Medtr8g471160.1 | 3-hydroxyacyl-CoA dehydratase | HC | chr8:2876...    88   5e-18
Medtr8g471160.2 | 3-hydroxyacyl-CoA dehydratase | HC | chr8:2876...    64   7e-11

>Medtr4g060990.1 | tyrosine phosphatase-like protein PTPLB protein |
           HC | chr4:22442171-22439368 | 20130731
          Length = 219

 Score =  370 bits (950), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 175/216 (81%), Positives = 197/216 (91%)

Query: 4   LGISTLYLLSYNSLQAIGWTVSLTKIVFNLVSTASINGTYASAGQLIIFLQCAAFLEVIH 63
           L ISTLYLL+YNS QAIGW VSL  I++NL+ST+SI GTYASAG LI FLQCAAFLEVIH
Sbjct: 3   LKISTLYLLAYNSFQAIGWFVSLINILYNLLSTSSITGTYASAGTLISFLQCAAFLEVIH 62

Query: 64  GAIGLVPSGVLLPLMQWGGRTHFVLALVAKLDEVQELTSIFITFLAWSISEVIRYSHYAF 123
           GAIGLVPSG LLPLMQWGGRTHFVLA+V  + EVQEL  +FITFLAWSI E+IRYSHYAF
Sbjct: 63  GAIGLVPSGALLPLMQWGGRTHFVLAIVNGIHEVQELPPVFITFLAWSIGEIIRYSHYAF 122

Query: 124 SCLGNCPSWITYLRYTAFIVLYPLGVGPGEIWAMYQALPIIKKKNLYADSFSSLPFSYYD 183
           SCLGNCPSWITY+RYTAFIV+YP+GV PGE+W MYQ+LPIIK+KN+YADSFSSLPFSYYD
Sbjct: 123 SCLGNCPSWITYIRYTAFIVIYPVGVFPGELWLMYQSLPIIKEKNIYADSFSSLPFSYYD 182

Query: 184 FLRVVLIVYPFLWLKLYLHLFKQRRAKLYRQHDKKR 219
           FL+VV++VYPFLW KLYLHLFKQRR+KLY++ DKKR
Sbjct: 183 FLKVVIVVYPFLWFKLYLHLFKQRRSKLYKRRDKKR 218


>Medtr8g471160.1 | 3-hydroxyacyl-CoA dehydratase | HC |
           chr8:28767335-28770414 | 20130731
          Length = 221

 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 3/183 (1%)

Query: 9   LYLLSYNSLQAIGWTVSLTKIVFNLVSTASINGTYASAGQLIIFLQCAAFLEVIHGAIGL 68
           LYL  YN     GW   L  ++  L      N  Y+ A + ++F Q AA LE++HG +G+
Sbjct: 11  LYLSLYNFTVLFGWLQVLFLVLKTLKEMGHQN-VYSVAQKPLLFAQTAAILEILHGLVGI 69

Query: 69  VPSGVLLPLMQWGGRTHFVLALVAKLDEVQELTSIFITFLAWSISEVIRYSHYAF-SCLG 127
           V S +   L Q   R   V  ++    E Q    +    ++WSI+E+IRYS +       
Sbjct: 70  VRSPISATLPQISSRLFLVWGILWSFPETQTHFLVSSLLISWSITEIIRYSFFGLKEAFS 129

Query: 128 NCPSWITYLRYTAFIVLYPLGVGPGEIWAMYQALPIIKKKNLYADSFSSLPFSYYDFLRV 187
             PSW+ +LRY+ F+VLYP G+   E+  +Y ALP IK    Y     +   S +D+  +
Sbjct: 130 FSPSWLLWLRYSTFLVLYPTGIS-SEVGLIYIALPFIKASEKYCIRMPNTWNSSFDYFYI 188

Query: 188 VLI 190
            ++
Sbjct: 189 AIV 191


>Medtr8g471160.2 | 3-hydroxyacyl-CoA dehydratase | HC |
           chr8:28767335-28770380 | 20130731
          Length = 156

 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 2/140 (1%)

Query: 9   LYLLSYNSLQAIGWTVSLTKIVFNLVSTASINGTYASAGQLIIFLQCAAFLEVIHGAIGL 68
           LYL  YN     GW   L  ++  L      N  Y+ A + ++F Q AA LE++HG +G+
Sbjct: 11  LYLSLYNFTVLFGWLQVLFLVLKTLKEMGHQN-VYSVAQKPLLFAQTAAILEILHGLVGI 69

Query: 69  VPSGVLLPLMQWGGRTHFVLALVAKLDEVQELTSIFITFLAWSISEVIRYSHYAF-SCLG 127
           V S +   L Q   R   V  ++    E Q    +    ++WSI+E+IRYS +       
Sbjct: 70  VRSPISATLPQISSRLFLVWGILWSFPETQTHFLVSSLLISWSITEIIRYSFFGLKEAFS 129

Query: 128 NCPSWITYLRYTAFIVLYPL 147
             PSW+ +LRY   +VL  L
Sbjct: 130 FSPSWLLWLRYEICVVLINL 149