Miyakogusa Predicted Gene
- Lj3g3v3132900.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3132900.1 Non Characterized Hit- tr|I1LK90|I1LK90_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.69,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; CCR4 NOT-RELATED,NULL;
NOT2_3_5,NOT2/NOT3/NOT5,CUFF.45345.1
(613 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g096180.2 | CCR4-NOT transcription complex subunit 2 | HC ... 809 0.0
Medtr2g096180.1 | CCR4-NOT transcription complex subunit 2 | HC ... 790 0.0
Medtr2g096180.3 | CCR4-NOT transcription complex subunit 2 | HC ... 784 0.0
Medtr4g061843.1 | CCR4-NOT transcription complex subunit 2 | HC ... 780 0.0
Medtr2g096180.4 | CCR4-NOT transcription complex subunit 2 | HC ... 765 0.0
Medtr4g061843.2 | CCR4-NOT transcription complex subunit 2 | HC ... 733 0.0
Medtr4g061843.3 | CCR4-NOT transcription complex subunit 2 | HC ... 719 0.0
Medtr4g061843.4 | CCR4-NOT transcription complex subunit 2 | HC ... 667 0.0
Medtr4g061960.1 | CCR4-NOT transcription complex subunit 2 | HC ... 491 e-139
Medtr7g085350.1 | transcription regulator NOT2/NOT3/NOT5 family ... 50 6e-06
Medtr7g085350.2 | transcription regulator NOT2/NOT3/NOT5 family ... 50 6e-06
>Medtr2g096180.2 | CCR4-NOT transcription complex subunit 2 | HC |
chr2:41057795-41063834 | 20130731
Length = 620
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/612 (67%), Positives = 468/612 (76%), Gaps = 23/612 (3%)
Query: 17 PDGAGRSFATSFS-------------GSIQGLHNIHGSFNVPNMSGTLTSRNSTINNVPS 63
PDGAGR+F TSFS G IQGLHN+HGSFN+PNM TLTSRNSTIN++P+
Sbjct: 17 PDGAGRTF-TSFSSQSGAASPIYQHTGGIQGLHNMHGSFNIPNMPSTLTSRNSTINSMPT 75
Query: 64 GGVQQPTGSLSSGRFTSNNLPVALSQLXXXXXXXXXXVTNRGGLGVSPILGNAGPRIXXX 123
G VQQPT SLSSGRFTSNNLP ALSQL V +RGGLGVSPILGNAGPRI
Sbjct: 76 GAVQQPTSSLSSGRFTSNNLPSALSQLSHGSSHGHSGVNSRGGLGVSPILGNAGPRITSS 135
Query: 124 XXXXXXXXXXXXXXXX-LSVPGLTXXXXXXXXXXXXXXXIQGQNRLMSGMLPQGSPQVLA 182
LS+PGL +QGQNR+MSG+LPQGSPQV++
Sbjct: 136 MGNMVGGGNIGRISSGGLSIPGLASRLNLNGNSGSGGLGVQGQNRMMSGVLPQGSPQVIS 195
Query: 183 MLGNSYPSAGGPFSQSHIQGVNNLNSMRMLNDVNSNDTSPFDINDFPQLTSRPGSAXXXX 242
MLGNSYPSAGGP SQSH+Q V++LNSM MLND+NS+D+SPFD+NDFPQLTSRP SA
Sbjct: 196 MLGNSYPSAGGPLSQSHMQAVHHLNSMGMLNDLNSSDSSPFDLNDFPQLTSRPSSAGGPQ 255
Query: 243 XXXXXXXXXXXXVSPIVQQNQEFSLQNEEFPALPGFKGGNADYTMDMHQKEQLHDNAVSM 302
+SPIVQQNQEFS+QNE+FPALPG+KGGN ++TMDMHQKEQL+DN +SM
Sbjct: 256 GQLGSLRKQG--LSPIVQQNQEFSIQNEDFPALPGYKGGNGEFTMDMHQKEQLNDNTMSM 313
Query: 303 MQSQHFSMGRSAGFSLGGAYSSHRAQQQQQHTPSIXXXXXXXXXXXXXXQDLLHLHGSDI 362
MQSQHFSMGRSAGFSLGG+YSSHR+QQQ H+PS+ QDL H+HGSD+
Sbjct: 314 MQSQHFSMGRSAGFSLGGSYSSHRSQQQ--HSPSVSNSGVSFSSMNN--QDL-HMHGSDV 368
Query: 363 FPSSHSAYHSQTSGPPGIGLRPLNSPNTVSGMGSYDXXXXXXXXXXXXXX-XXXXMSAVS 421
FPSS+S YHSQT+GPPGIGLRPLNSPNTVSG G YD MSAV+
Sbjct: 369 FPSSNSTYHSQTNGPPGIGLRPLNSPNTVSGTGPYDQLIQQYQQHQNQSQFRLQQMSAVN 428
Query: 422 QSFKDQGMKSMQTAQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLH 481
QSF+D GMKSMQTAQS PDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLH
Sbjct: 429 QSFRDHGMKSMQTAQSAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLH 488
Query: 482 KTFASPWSEDPTKADPEFSVPQCYYTKQPPTLHQGYFSKFSVETLFYIFYSMPKDEAQLY 541
KTF SPWSE+P K DPEFSV QCYY K PP LHQGYF+KF++ETLFYIFYSMPKDEAQLY
Sbjct: 489 KTFGSPWSEEPAKGDPEFSVLQCYYAKPPPALHQGYFAKFTLETLFYIFYSMPKDEAQLY 548
Query: 542 AANELNNRGWFYHKELRLWLIRVPNIEPLVKTNTHERGSYHCFEPNTFEIIRKDNFVLQY 601
AANEL RGWFYHKE R+W I+VPN+EPLVKT+T+ERGSYHCF+P+TFE +R+DNFV QY
Sbjct: 549 AANELYKRGWFYHKEHRMWYIKVPNMEPLVKTSTYERGSYHCFDPSTFETVRRDNFVFQY 608
Query: 602 ELLEKRPHLPQH 613
E++EKRP LPQH
Sbjct: 609 EMVEKRPSLPQH 620
>Medtr2g096180.1 | CCR4-NOT transcription complex subunit 2 | HC |
chr2:41057795-41063834 | 20130731
Length = 658
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/650 (63%), Positives = 468/650 (72%), Gaps = 61/650 (9%)
Query: 17 PDGAGRSFATSFS-------------GSIQGLHNIHGSFNVPNMSGTLTSRNSTINNVPS 63
PDGAGR+F TSFS G IQGLHN+HGSFN+PNM TLTSRNSTIN++P+
Sbjct: 17 PDGAGRTF-TSFSSQSGAASPIYQHTGGIQGLHNMHGSFNIPNMPSTLTSRNSTINSMPT 75
Query: 64 GGVQQPTGSLSSGRFTSNNLPVALSQLXXXXXXXXXXVTNRGG----------------- 106
G VQQPT SLSSGRFTSNNLP ALSQL V +RGG
Sbjct: 76 GAVQQPTSSLSSGRFTSNNLPSALSQLSHGSSHGHSGVNSRGGISVVGNPGFSNNTNGVA 135
Query: 107 ---------------------LGVSPILGNAGPRIXXXXXXXXXXXXXXXXXXX-LSVPG 144
LGVSPILGNAGPRI LS+PG
Sbjct: 136 GSIPGILPSSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVGGGNIGRISSGGLSIPG 195
Query: 145 LTXXXXXXXXXXXXXXXIQGQNRLMSGMLPQGSPQVLAMLGNSYPSAGGPFSQSHIQGVN 204
L +QGQNR+MSG+LPQGSPQV++MLGNSYPSAGGP SQSH+Q V+
Sbjct: 196 LASRLNLNGNSGSGGLGVQGQNRMMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHMQAVH 255
Query: 205 NLNSMRMLNDVNSNDTSPFDINDFPQLTSRPGSAXXXXXXXXXXXXXXXXVSPIVQQNQE 264
+LNSM MLND+NS+D+SPFD+NDFPQLTSRP SA +SPIVQQNQE
Sbjct: 256 HLNSMGMLNDLNSSDSSPFDLNDFPQLTSRPSSAGGPQGQLGSLRKQG--LSPIVQQNQE 313
Query: 265 FSLQNEEFPALPGFKGGNADYTMDMHQKEQLHDNAVSMMQSQHFSMGRSAGFSLGGAYSS 324
FS+QNE+FPALPG+KGGN ++TMDMHQKEQL+DN +SMMQSQHFSMGRSAGFSLGG+YSS
Sbjct: 314 FSIQNEDFPALPGYKGGNGEFTMDMHQKEQLNDNTMSMMQSQHFSMGRSAGFSLGGSYSS 373
Query: 325 HRAQQQQQHTPSIXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSAYHSQTSGPPGIGLRP 384
HR+QQQ H+PS+ QDL H+HGSD+FPSS+S YHSQT+GPPGIGLRP
Sbjct: 374 HRSQQQ--HSPSVSNSGVSFSSMNN--QDL-HMHGSDVFPSSNSTYHSQTNGPPGIGLRP 428
Query: 385 LNSPNTVSGMGSYDXXXXXXXXXXXXXX-XXXXMSAVSQSFKDQGMKSMQTAQSTPDPFG 443
LNSPNTVSG G YD MSAV+QSF+D GMKSMQTAQS PDPFG
Sbjct: 429 LNSPNTVSGTGPYDQLIQQYQQHQNQSQFRLQQMSAVNQSFRDHGMKSMQTAQSAPDPFG 488
Query: 444 LLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFASPWSEDPTKADPEFSVPQ 503
LLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTF SPWSE+P K DPEFSV Q
Sbjct: 489 LLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSEEPAKGDPEFSVLQ 548
Query: 504 CYYTKQPPTLHQGYFSKFSVETLFYIFYSMPKDEAQLYAANELNNRGWFYHKELRLWLIR 563
CYY K PP LHQGYF+KF++ETLFYIFYSMPKDEAQLYAANEL RGWFYHKE R+W I+
Sbjct: 549 CYYAKPPPALHQGYFAKFTLETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRMWYIK 608
Query: 564 VPNIEPLVKTNTHERGSYHCFEPNTFEIIRKDNFVLQYELLEKRPHLPQH 613
VPN+EPLVKT+T+ERGSYHCF+P+TFE +R+DNFV QYE++EKRP LPQH
Sbjct: 609 VPNMEPLVKTSTYERGSYHCFDPSTFETVRRDNFVFQYEMVEKRPSLPQH 658
>Medtr2g096180.3 | CCR4-NOT transcription complex subunit 2 | HC |
chr2:41057810-41063663 | 20130731
Length = 571
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/578 (68%), Positives = 449/578 (77%), Gaps = 9/578 (1%)
Query: 38 IHGSFNVPNMSGTLTSRNSTINNVPSGGVQQPTGSLSSGRFTSNNLPVALSQLXXXXXXX 97
+HGSFN+PNM TLTSRNSTIN++P+G VQQPT SLSSGRFTSNNLP ALSQL
Sbjct: 1 MHGSFNIPNMPSTLTSRNSTINSMPTGAVQQPTSSLSSGRFTSNNLPSALSQLSHGSSHG 60
Query: 98 XXXVTNRGGLGVSPILGNAGPRIXXXXXXXXXXXXXXXXXXX-LSVPGLTXXXXXXXXXX 156
V +RGGLGVSPILGNAGPRI LS+PGL
Sbjct: 61 HSGVNSRGGLGVSPILGNAGPRITSSMGNMVGGGNIGRISSGGLSIPGLASRLNLNGNSG 120
Query: 157 XXXXXIQGQNRLMSGMLPQGSPQVLAMLGNSYPSAGGPFSQSHIQGVNNLNSMRMLNDVN 216
+QGQNR+MSG+LPQGSPQV++MLGNSYPSAGGP SQSH+Q V++LNSM MLND+N
Sbjct: 121 SGGLGVQGQNRMMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHMQAVHHLNSMGMLNDLN 180
Query: 217 SNDTSPFDINDFPQLTSRPGSAXXXXXXXXXXXXXXXXVSPIVQQNQEFSLQNEEFPALP 276
S+D+SPFD+NDFPQLTSRP SA +SPIVQQNQEFS+QNE+FPALP
Sbjct: 181 SSDSSPFDLNDFPQLTSRPSSAGGPQGQLGSLRKQG--LSPIVQQNQEFSIQNEDFPALP 238
Query: 277 GFKGGNADYTMDMHQKEQLHDNAVSMMQSQHFSMGRSAGFSLGGAYSSHRAQQQQQHTPS 336
G+KGGN ++TMDMHQKEQL+DN +SMMQSQHFSMGRSAGFSLGG+YSSHR+QQQ H+PS
Sbjct: 239 GYKGGNGEFTMDMHQKEQLNDNTMSMMQSQHFSMGRSAGFSLGGSYSSHRSQQQ--HSPS 296
Query: 337 IXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSAYHSQTSGPPGIGLRPLNSPNTVSGMGS 396
+ QDL H+HGSD+FPSS+S YHSQT+GPPGIGLRPLNSPNTVSG G
Sbjct: 297 VSNSGVSFSSMNN--QDL-HMHGSDVFPSSNSTYHSQTNGPPGIGLRPLNSPNTVSGTGP 353
Query: 397 YDXXXXXXXXXXXXXX-XXXXMSAVSQSFKDQGMKSMQTAQSTPDPFGLLGLLSVIRMSD 455
YD MSAV+QSF+D GMKSMQTAQS PDPFGLLGLLSVIRMSD
Sbjct: 354 YDQLIQQYQQHQNQSQFRLQQMSAVNQSFRDHGMKSMQTAQSAPDPFGLLGLLSVIRMSD 413
Query: 456 PDLTSLALGIDLTTLGLNLNSSENLHKTFASPWSEDPTKADPEFSVPQCYYTKQPPTLHQ 515
PDLTSLALGIDLTTLGLNLNSSENLHKTF SPWSE+P K DPEFSV QCYY K PP LHQ
Sbjct: 414 PDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSEEPAKGDPEFSVLQCYYAKPPPALHQ 473
Query: 516 GYFSKFSVETLFYIFYSMPKDEAQLYAANELNNRGWFYHKELRLWLIRVPNIEPLVKTNT 575
GYF+KF++ETLFYIFYSMPKDEAQLYAANEL RGWFYHKE R+W I+VPN+EPLVKT+T
Sbjct: 474 GYFAKFTLETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRMWYIKVPNMEPLVKTST 533
Query: 576 HERGSYHCFEPNTFEIIRKDNFVLQYELLEKRPHLPQH 613
+ERGSYHCF+P+TFE +R+DNFV QYE++EKRP LPQH
Sbjct: 534 YERGSYHCFDPSTFETVRRDNFVFQYEMVEKRPSLPQH 571
>Medtr4g061843.1 | CCR4-NOT transcription complex subunit 2 | HC |
chr4:22912417-22920126 | 20130731
Length = 657
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/644 (63%), Positives = 452/644 (70%), Gaps = 52/644 (8%)
Query: 18 DGAGRSFATSFS-------------GSIQGLHNIHGSFNVPNMSGTLTSRNSTINNVPSG 64
D AGRSFATSFS G+IQGLHNIHGSFNVPNM GTLT RNSTINN+PSG
Sbjct: 18 DSAGRSFATSFSSQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGTLTPRNSTINNIPSG 77
Query: 65 GVQQPTGSLSSGRFTSNNLPVALSQLXXXXXXXXXXVTNRGG------------------ 106
GVQQ G+LSSGRF SNNLPVALSQL VTNRGG
Sbjct: 78 GVQQQAGNLSSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGTSVVGNPGFNSGTNGVGG 137
Query: 107 -----------------LGVSPILGNAGPRIXXXXXXXXXXXXXXXXXXXLSVPGLTXXX 149
LGVSPILGNAG RI LSVPGL
Sbjct: 138 SIPGFPASIGNRNAVPGLGVSPILGNAGSRITSSVGNMIGGGNIGRTGGGLSVPGLGSRL 197
Query: 150 XXXXXXXXXXXXIQGQNRLMSGMLPQGSPQVLAMLGNSYPSAGGPFSQSHIQGVNNLNSM 209
+QGQNRLMS +LPQGSPQ ++M GNSYPSAGG SQSHI VNN+N+M
Sbjct: 198 NFGGNSGSGALGMQGQNRLMSSVLPQGSPQGISMQGNSYPSAGGALSQSHIHAVNNMNTM 257
Query: 210 RMLNDVNSNDTSPFDINDFPQLTSRPGSAXXXXXXXXXXXXXXXXVSPIVQQNQEFSLQN 269
RM NDVNSND+SPFD+NDFPQL+SRP SA +SPI QQN EFS+QN
Sbjct: 258 RMFNDVNSNDSSPFDLNDFPQLSSRPSSAGGSQGQLGSLRNQGLGISPIGQQNHEFSIQN 317
Query: 270 EEFPALPGFKGGNADYTMDMHQKEQLHDNAVSMMQSQHFSMGRSAGFSLGGAYSSHRAQQ 329
E+FPALPGFKGGNADY MDMHQKEQLHDNA SMMQSQHFSMGRSAGFSLGG YSSHR Q
Sbjct: 318 EDFPALPGFKGGNADYDMDMHQKEQLHDNASSMMQSQHFSMGRSAGFSLGGTYSSHRTQP 377
Query: 330 QQQHTPSIXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSAYHSQTSGPPGIGLRPLNSPN 389
QQ H PS+ QDLLH HGSDIFPS HSAY SQTSGPPGIGLRP NSPN
Sbjct: 378 QQ-HNPSVSSGGVSFSSVNN--QDLLHQHGSDIFPS-HSAYQSQTSGPPGIGLRPSNSPN 433
Query: 390 TVSGMGSYDXXXXXXXXXXXXXXXXXXMSAVSQSFKDQGMKSMQTAQSTPDPFGLLGLLS 449
VSGMGSYD M +++QSF+DQ MKSMQ AQSTPDP+GLLGLLS
Sbjct: 434 AVSGMGSYDPLIQQYQQQKNQSQFRLQMPSLNQSFRDQSMKSMQAAQSTPDPYGLLGLLS 493
Query: 450 VIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFASPWSEDPTKADPEFSVPQCYYTKQ 509
VIRM+D DL SLALGIDLTTLGLNLNSSENLHKTF SPWSE+ K DPEF+VPQCY+T+Q
Sbjct: 494 VIRMNDLDLASLALGIDLTTLGLNLNSSENLHKTFKSPWSEESAKGDPEFNVPQCYFTEQ 553
Query: 510 PPTLHQGYFSKFSVETLFYIFYSMPKDEAQLYAANELNNRGWFYHKELRLWLIRVPNIEP 569
PP LHQGYFSKFSVETLFYIFYSMPKD+AQLYAANELNNRGW+YHKE RLW R PN+E
Sbjct: 554 PPALHQGYFSKFSVETLFYIFYSMPKDKAQLYAANELNNRGWWYHKEYRLWFKRAPNMEL 613
Query: 570 LVKTNTHERGSYHCFEPNTFEIIRKDNFVLQYELLEKRPHLPQH 613
LV+T+T+ERG++HCF+P++FE +RKDN VL Y++LE R LPQH
Sbjct: 614 LVQTSTYERGTFHCFDPSSFETVRKDNVVLSYDMLENRHLLPQH 657
>Medtr2g096180.4 | CCR4-NOT transcription complex subunit 2 | HC |
chr2:41057810-41063663 | 20130731
Length = 609
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/616 (64%), Positives = 449/616 (72%), Gaps = 47/616 (7%)
Query: 38 IHGSFNVPNMSGTLTSRNSTINNVPSGGVQQPTGSLSSGRFTSNNLPVALSQLXXXXXXX 97
+HGSFN+PNM TLTSRNSTIN++P+G VQQPT SLSSGRFTSNNLP ALSQL
Sbjct: 1 MHGSFNIPNMPSTLTSRNSTINSMPTGAVQQPTSSLSSGRFTSNNLPSALSQLSHGSSHG 60
Query: 98 XXXVTNRGG--------------------------------------LGVSPILGNAGPR 119
V +RGG LGVSPILGNAGPR
Sbjct: 61 HSGVNSRGGISVVGNPGFSNNTNGVAGSIPGILPSSAAIGNRNAVPGLGVSPILGNAGPR 120
Query: 120 IXXXXXXXXXXXXXXXXXXX-LSVPGLTXXXXXXXXXXXXXXXIQGQNRLMSGMLPQGSP 178
I LS+PGL +QGQNR+MSG+LPQGSP
Sbjct: 121 ITSSMGNMVGGGNIGRISSGGLSIPGLASRLNLNGNSGSGGLGVQGQNRMMSGVLPQGSP 180
Query: 179 QVLAMLGNSYPSAGGPFSQSHIQGVNNLNSMRMLNDVNSNDTSPFDINDFPQLTSRPGSA 238
QV++MLGNSYPSAGGP SQSH+Q V++LNSM MLND+NS+D+SPFD+NDFPQLTSRP SA
Sbjct: 181 QVISMLGNSYPSAGGPLSQSHMQAVHHLNSMGMLNDLNSSDSSPFDLNDFPQLTSRPSSA 240
Query: 239 XXXXXXXXXXXXXXXXVSPIVQQNQEFSLQNEEFPALPGFKGGNADYTMDMHQKEQLHDN 298
+SPIVQQNQEFS+QNE+FPALPG+KGGN ++TMDMHQKEQL+DN
Sbjct: 241 GGPQGQLGSLRKQG--LSPIVQQNQEFSIQNEDFPALPGYKGGNGEFTMDMHQKEQLNDN 298
Query: 299 AVSMMQSQHFSMGRSAGFSLGGAYSSHRAQQQQQHTPSIXXXXXXXXXXXXXXQDLLHLH 358
+SMMQSQHFSMGRSAGFSLGG+YSSHR+QQQ H+PS+ QDL H+H
Sbjct: 299 TMSMMQSQHFSMGRSAGFSLGGSYSSHRSQQQ--HSPSVSNSGVSFSSMNN--QDL-HMH 353
Query: 359 GSDIFPSSHSAYHSQTSGPPGIGLRPLNSPNTVSGMGSYDXXXXXXXXXXXXXX-XXXXM 417
GSD+FPSS+S YHSQT+GPPGIGLRPLNSPNTVSG G YD M
Sbjct: 354 GSDVFPSSNSTYHSQTNGPPGIGLRPLNSPNTVSGTGPYDQLIQQYQQHQNQSQFRLQQM 413
Query: 418 SAVSQSFKDQGMKSMQTAQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSS 477
SAV+QSF+D GMKSMQTAQS PDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSS
Sbjct: 414 SAVNQSFRDHGMKSMQTAQSAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSS 473
Query: 478 ENLHKTFASPWSEDPTKADPEFSVPQCYYTKQPPTLHQGYFSKFSVETLFYIFYSMPKDE 537
ENLHKTF SPWSE+P K DPEFSV QCYY K PP LHQGYF+KF++ETLFYIFYSMPKDE
Sbjct: 474 ENLHKTFGSPWSEEPAKGDPEFSVLQCYYAKPPPALHQGYFAKFTLETLFYIFYSMPKDE 533
Query: 538 AQLYAANELNNRGWFYHKELRLWLIRVPNIEPLVKTNTHERGSYHCFEPNTFEIIRKDNF 597
AQLYAANEL RGWFYHKE R+W I+VPN+EPLVKT+T+ERGSYHCF+P+TFE +R+DNF
Sbjct: 534 AQLYAANELYKRGWFYHKEHRMWYIKVPNMEPLVKTSTYERGSYHCFDPSTFETVRRDNF 593
Query: 598 VLQYELLEKRPHLPQH 613
V QYE++EKRP LPQH
Sbjct: 594 VFQYEMVEKRPSLPQH 609
>Medtr4g061843.2 | CCR4-NOT transcription complex subunit 2 | HC |
chr4:22912477-22919800 | 20130731
Length = 598
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/602 (63%), Positives = 424/602 (70%), Gaps = 39/602 (6%)
Query: 47 MSGTLTSRNSTINNVPSGGVQQPTGSLSSGRFTSNNLPVALSQLXXXXXXXXXXVTNRGG 106
M GTLT RNSTINN+PSGGVQQ G+LSSGRF SNNLPVALSQL VTNRGG
Sbjct: 1 MPGTLTPRNSTINNIPSGGVQQQAGNLSSGRFASNNLPVALSQLSHGSSHGHSGVTNRGG 60
Query: 107 -----------------------------------LGVSPILGNAGPRIXXXXXXXXXXX 131
LGVSPILGNAG RI
Sbjct: 61 TSVVGNPGFNSGTNGVGGSIPGFPASIGNRNAVPGLGVSPILGNAGSRITSSVGNMIGGG 120
Query: 132 XXXXXXXXLSVPGLTXXXXXXXXXXXXXXXIQGQNRLMSGMLPQGSPQVLAMLGNSYPSA 191
LSVPGL +QGQNRLMS +LPQGSPQ ++M GNSYPSA
Sbjct: 121 NIGRTGGGLSVPGLGSRLNFGGNSGSGALGMQGQNRLMSSVLPQGSPQGISMQGNSYPSA 180
Query: 192 GGPFSQSHIQGVNNLNSMRMLNDVNSNDTSPFDINDFPQLTSRPGSAXXXXXXXXXXXXX 251
GG SQSHI VNN+N+MRM NDVNSND+SPFD+NDFPQL+SRP SA
Sbjct: 181 GGALSQSHIHAVNNMNTMRMFNDVNSNDSSPFDLNDFPQLSSRPSSAGGSQGQLGSLRNQ 240
Query: 252 XXXVSPIVQQNQEFSLQNEEFPALPGFKGGNADYTMDMHQKEQLHDNAVSMMQSQHFSMG 311
+SPI QQN EFS+QNE+FPALPGFKGGNADY MDMHQKEQLHDNA SMMQSQHFSMG
Sbjct: 241 GLGISPIGQQNHEFSIQNEDFPALPGFKGGNADYDMDMHQKEQLHDNASSMMQSQHFSMG 300
Query: 312 RSAGFSLGGAYSSHRAQQQQQHTPSIXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSAYH 371
RSAGFSLGG YSSHR Q QQ H PS+ QDLLH HGSDIFPS HSAY
Sbjct: 301 RSAGFSLGGTYSSHRTQPQQ-HNPSVSSGGVSFSSVNN--QDLLHQHGSDIFPS-HSAYQ 356
Query: 372 SQTSGPPGIGLRPLNSPNTVSGMGSYDXXXXXXXXXXXXXXXXXXMSAVSQSFKDQGMKS 431
SQTSGPPGIGLRP NSPN VSGMGSYD M +++QSF+DQ MKS
Sbjct: 357 SQTSGPPGIGLRPSNSPNAVSGMGSYDPLIQQYQQQKNQSQFRLQMPSLNQSFRDQSMKS 416
Query: 432 MQTAQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFASPWSED 491
MQ AQSTPDP+GLLGLLSVIRM+D DL SLALGIDLTTLGLNLNSSENLHKTF SPWSE+
Sbjct: 417 MQAAQSTPDPYGLLGLLSVIRMNDLDLASLALGIDLTTLGLNLNSSENLHKTFKSPWSEE 476
Query: 492 PTKADPEFSVPQCYYTKQPPTLHQGYFSKFSVETLFYIFYSMPKDEAQLYAANELNNRGW 551
K DPEF+VPQCY+T+QPP LHQGYFSKFSVETLFYIFYSMPKD+AQLYAANELNNRGW
Sbjct: 477 SAKGDPEFNVPQCYFTEQPPALHQGYFSKFSVETLFYIFYSMPKDKAQLYAANELNNRGW 536
Query: 552 FYHKELRLWLIRVPNIEPLVKTNTHERGSYHCFEPNTFEIIRKDNFVLQYELLEKRPHLP 611
+YHKE RLW R PN+E LV+T+T+ERG++HCF+P++FE +RKDN VL Y++LE R LP
Sbjct: 537 WYHKEYRLWFKRAPNMELLVQTSTYERGTFHCFDPSSFETVRKDNVVLSYDMLENRHLLP 596
Query: 612 QH 613
QH
Sbjct: 597 QH 598
>Medtr4g061843.3 | CCR4-NOT transcription complex subunit 2 | HC |
chr4:22912417-22920114 | 20130731
Length = 624
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/645 (60%), Positives = 430/645 (66%), Gaps = 87/645 (13%)
Query: 18 DGAGRSFATSFS-------------GSIQGLHNIHGSFNVPNMSGTLTSRNSTINNVPSG 64
D AGRSFATSFS G+IQGLHNIHGSFNVPNM GTLT RNSTINN+PSG
Sbjct: 18 DSAGRSFATSFSSQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGTLTPRNSTINNIPSG 77
Query: 65 GVQQPTGSLSSGRFTSNNLPVALSQLXXXXXXXXXXVTNRGG------------------ 106
GVQQ G+LSSGRF SNNLPVALSQL VTNRGG
Sbjct: 78 GVQQQAGNLSSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGTSVVGNPGFNSGTNGVGG 137
Query: 107 -----------------LGVSPILGNAGPRIXXXXXXXXXXXXXXXXXXXLSVPGLTXXX 149
LGVSPILGNAG RI LSVPGL
Sbjct: 138 SIPGFPASIGNRNAVPGLGVSPILGNAGSRITSSVGNMIGGGNIGRTGGGLSVPGLGSRL 197
Query: 150 XXXXXXXXXXXXIQGQNRLMSGMLPQGSPQVLAMLGNSYPSAGGPFSQSHIQGVNNLNSM 209
+QGQNRLMS +LPQGSPQ ++M GNSYPSAGG SQSHI VNN+N+M
Sbjct: 198 NFGGNSGSGALGMQGQNRLMSSVLPQGSPQGISMQGNSYPSAGGALSQSHIHAVNNMNTM 257
Query: 210 RMLNDVNSNDTSPFDINDFPQLTSRPGSAXXXXXXXXXXXXXXXXVSPIVQQNQEFSLQN 269
RM NDVNSND+SPFD+NDFPQL+SRP SA
Sbjct: 258 RMFNDVNSNDSSPFDLNDFPQLSSRPSSAGGSQ--------------------------- 290
Query: 270 EEFPALPGFKGGNADYTMDMHQKEQLHDNAVSMMQSQHFS-MGRSAGFSLGGAYSSHRAQ 328
G GGNADY MDMHQKEQLHDNA SMMQSQHFS MGRSAGFSLGG YSSHR Q
Sbjct: 291 -------GQLGGNADYDMDMHQKEQLHDNASSMMQSQHFSQMGRSAGFSLGGTYSSHRTQ 343
Query: 329 QQQQHTPSIXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSAYHSQTSGPPGIGLRPLNSP 388
QQ H PS+ QDLLH HGSDIFPS HSAY SQTSGPPGIGLRP NSP
Sbjct: 344 PQQ-HNPSVSSGGVSFSSVNN--QDLLHQHGSDIFPS-HSAYQSQTSGPPGIGLRPSNSP 399
Query: 389 NTVSGMGSYDXXXXXXXXXXXXXXXXXXMSAVSQSFKDQGMKSMQTAQSTPDPFGLLGLL 448
N VSGMGSYD M +++QSF+DQ MKSMQ AQSTPDP+GLLGLL
Sbjct: 400 NAVSGMGSYDPLIQQYQQQKNQSQFRLQMPSLNQSFRDQSMKSMQAAQSTPDPYGLLGLL 459
Query: 449 SVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFASPWSEDPTKADPEFSVPQCYYTK 508
SVIRM+D DL SLALGIDLTTLGLNLNSSENLHKTF SPWSE+ K DPEF+VPQCY+T+
Sbjct: 460 SVIRMNDLDLASLALGIDLTTLGLNLNSSENLHKTFKSPWSEESAKGDPEFNVPQCYFTE 519
Query: 509 QPPTLHQGYFSKFSVETLFYIFYSMPKDEAQLYAANELNNRGWFYHKELRLWLIRVPNIE 568
QPP LHQGYFSKFSVETLFYIFYSMPKD+AQLYAANELNNRGW+YHKE RLW R PN+E
Sbjct: 520 QPPALHQGYFSKFSVETLFYIFYSMPKDKAQLYAANELNNRGWWYHKEYRLWFKRAPNME 579
Query: 569 PLVKTNTHERGSYHCFEPNTFEIIRKDNFVLQYELLEKRPHLPQH 613
LV+T+T+ERG++HCF+P++FE +RKDN VL Y++LE R LPQH
Sbjct: 580 LLVQTSTYERGTFHCFDPSSFETVRKDNVVLSYDMLENRHLLPQH 624
>Medtr4g061843.4 | CCR4-NOT transcription complex subunit 2 | HC |
chr4:22912417-22920114 | 20130731
Length = 609
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/598 (62%), Positives = 401/598 (67%), Gaps = 59/598 (9%)
Query: 18 DGAGRSFATSFS-------------GSIQGLHNIHGSFNVPNMSGTLTSRNSTINNVPSG 64
D AGRSFATSFS G+IQGLHNIHGSFNVPNM GTLT RNSTINN+PSG
Sbjct: 18 DSAGRSFATSFSSQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGTLTPRNSTINNIPSG 77
Query: 65 GVQQPTGSLSSGRFTSNNLPVALSQLXXXXXXXXXXVTNRGG------------------ 106
GVQQ G+LSSGRF SNNLPVALSQL VTNRGG
Sbjct: 78 GVQQQAGNLSSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGTSVVGNPGFNSGTNGVGG 137
Query: 107 -----------------LGVSPILGNAGPRIXXXXXXXXXXXXXXXXXXXLSVPGLTXXX 149
LGVSPILGNAG RI LSVPGL
Sbjct: 138 SIPGFPASIGNRNAVPGLGVSPILGNAGSRITSSVGNMIGGGNIGRTGGGLSVPGLGSRL 197
Query: 150 XXXXXXXXXXXXIQGQNRLMSGMLPQGSPQVLAMLGNSYPSAGGPFSQSHIQGVNNLNSM 209
+QGQNRLMS +LPQGSPQ ++M GNSYPSAGG SQSHI VNN+N+M
Sbjct: 198 NFGGNSGSGALGMQGQNRLMSSVLPQGSPQGISMQGNSYPSAGGALSQSHIHAVNNMNTM 257
Query: 210 RMLNDVNSNDTSPFDINDFPQLTSRPGSAXXXXXXXXXXXXXXXXVSPIVQQNQEFSLQN 269
RM NDVNSND+SPFD+NDFPQL+SRP SA +SPI QQN EFS+QN
Sbjct: 258 RMFNDVNSNDSSPFDLNDFPQLSSRPSSAGGSQGQLGSLRNQGLGISPIGQQNHEFSIQN 317
Query: 270 EEFPALPGFKGGNADYTMDMHQKEQLHDNAVSMMQSQHFS-MGRSAGFSLGGAYSSHRAQ 328
E+FPALPGFKGGNADY MDMHQKEQLHDNA SMMQSQHFS MGRSAGFSLGG YSSHR Q
Sbjct: 318 EDFPALPGFKGGNADYDMDMHQKEQLHDNASSMMQSQHFSQMGRSAGFSLGGTYSSHRTQ 377
Query: 329 QQQQHTPSIXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSAYHSQTSGPPGIGLRPLNSP 388
QQ H PS QDLLH HGSDIFPS HSAY SQTSGPPGIGLRP NSP
Sbjct: 378 PQQ-HNPS--VSSGGVSFSSVNNQDLLHQHGSDIFPS-HSAYQSQTSGPPGIGLRPSNSP 433
Query: 389 NTVSGMGSYDXXXXXXXXXXXXXXXXXXMSAVSQSFKDQGMKSMQTAQSTPDPFGLLGLL 448
N VSGMGSYD M +++QSF+DQ MKSMQ AQSTPDP+GLLGLL
Sbjct: 434 NAVSGMGSYDPLIQQYQQQKNQSQFRLQMPSLNQSFRDQSMKSMQAAQSTPDPYGLLGLL 493
Query: 449 SVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFASPWSEDPTKADPEFSVPQCYYTK 508
SVIRM+D DL SLALGIDLTTLGLNLNSSENLHKTF SPWSE+ K DPEF+VPQCY+T+
Sbjct: 494 SVIRMNDLDLASLALGIDLTTLGLNLNSSENLHKTFKSPWSEESAKGDPEFNVPQCYFTE 553
Query: 509 QPPTLHQGYFSKFSVETLFYIFYSMPKDEAQLYAANELNNRGWFYHKE----LRLWLI 562
QPP LHQGYFSKFSVETLFYIFYSMPKD+AQLYAANEL F++ W+I
Sbjct: 554 QPPALHQGYFSKFSVETLFYIFYSMPKDKAQLYAANEL--YAIFFNPSFFGCFNFWMI 609
>Medtr4g061960.1 | CCR4-NOT transcription complex subunit 2 | HC |
chr4:22973895-22971677 | 20130731
Length = 333
Score = 491 bits (1265), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/334 (73%), Positives = 269/334 (80%), Gaps = 4/334 (1%)
Query: 280 GGNADYTMDMHQKEQLHDNAVSMMQSQHFSMGRSAGFSLGGAYSSHRAQQQQQHTPSIXX 339
GGNADY MDMHQKEQLHDNA SMMQSQHFSMGRSAGFSLGG YSSHR Q QQ H PS+
Sbjct: 4 GGNADYDMDMHQKEQLHDNASSMMQSQHFSMGRSAGFSLGGTYSSHRTQPQQ-HNPSVSS 62
Query: 340 XXXXXXXXXXXXQDLLHLHGSDIFPSSHSAYHSQTSGPPGIGLRPLNSPNTVSGMGSYDX 399
QDLLH HGSDIFPS HSAY SQTSGPPGIGLRP NSPN VSGMGSYD
Sbjct: 63 GGVSFSSVNN--QDLLHQHGSDIFPS-HSAYQSQTSGPPGIGLRPSNSPNAVSGMGSYDP 119
Query: 400 XXXXXXXXXXXXXXXXXMSAVSQSFKDQGMKSMQTAQSTPDPFGLLGLLSVIRMSDPDLT 459
M +++QSF+DQ MKSMQ AQSTPDP+GLLGLLSVIRM+D DL
Sbjct: 120 LIQQYQQQKNQSQFRLQMPSLNQSFRDQSMKSMQAAQSTPDPYGLLGLLSVIRMNDLDLA 179
Query: 460 SLALGIDLTTLGLNLNSSENLHKTFASPWSEDPTKADPEFSVPQCYYTKQPPTLHQGYFS 519
SLALGIDLTTLGLNLNSSENLHKTF SPWSE+ K DPEF+VPQCY+T+QPP LHQGYFS
Sbjct: 180 SLALGIDLTTLGLNLNSSENLHKTFKSPWSEESAKGDPEFNVPQCYFTEQPPALHQGYFS 239
Query: 520 KFSVETLFYIFYSMPKDEAQLYAANELNNRGWFYHKELRLWLIRVPNIEPLVKTNTHERG 579
KFSVETLFYIFYSMPKD+AQLYAANELNNRGW+YHKE RLW R PN+E LV+T+T+ERG
Sbjct: 240 KFSVETLFYIFYSMPKDKAQLYAANELNNRGWWYHKEYRLWFKRAPNMELLVQTSTYERG 299
Query: 580 SYHCFEPNTFEIIRKDNFVLQYELLEKRPHLPQH 613
++HCF+P++FE +RKDN VL Y++LE R LPQH
Sbjct: 300 TFHCFDPSSFETVRKDNVVLSYDMLENRHLLPQH 333
>Medtr7g085350.1 | transcription regulator NOT2/NOT3/NOT5 family
protein | HC | chr7:33041291-33054371 | 20130731
Length = 901
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 22/122 (18%)
Query: 501 VPQCYYTKQPPTLHQGYFSK------FSVETLFYIFYSMPKDEAQLYAANELNNRGWFYH 554
P Y Q P ++ F + F +TLF+ FY Q AA EL + W YH
Sbjct: 781 TPSSYPQVQAPIVNNPAFWERLGLEPFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYH 840
Query: 555 KELRLWLIRVPNIEPLVKTNTHERGSYHCFEPNTFEIIR-----------KDNFVLQYEL 603
++ W R + EP V T+ +E+G+Y F+ F I K++F +Y
Sbjct: 841 RKYNTWFQR--HEEPKVATDDYEQGTYVYFD---FHIANDDLQHGWCQRIKNDFTFEYNY 895
Query: 604 LE 605
LE
Sbjct: 896 LE 897
>Medtr7g085350.2 | transcription regulator NOT2/NOT3/NOT5 family
protein | HC | chr7:33041286-33054371 | 20130731
Length = 876
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 22/122 (18%)
Query: 501 VPQCYYTKQPPTLHQGYFSK------FSVETLFYIFYSMPKDEAQLYAANELNNRGWFYH 554
P Y Q P ++ F + F +TLF+ FY Q AA EL + W YH
Sbjct: 756 TPSSYPQVQAPIVNNPAFWERLGLEPFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYH 815
Query: 555 KELRLWLIRVPNIEPLVKTNTHERGSYHCFEPNTFEIIR-----------KDNFVLQYEL 603
++ W R + EP V T+ +E+G+Y F+ F I K++F +Y
Sbjct: 816 RKYNTWFQR--HEEPKVATDDYEQGTYVYFD---FHIANDDLQHGWCQRIKNDFTFEYNY 870
Query: 604 LE 605
LE
Sbjct: 871 LE 872