Miyakogusa Predicted Gene

Lj3g3v3087290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3087290.1 tr|B9H6B7|B9H6B7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_760413 PE=4
SV=1,30.5,5e-17,seg,NULL; coiled-coil,NULL,CUFF.45298.1
         (1113 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g061110.1 | hypothetical protein | HC | chr4:22559116-2256...   877   0.0  

>Medtr4g061110.1 | hypothetical protein | HC | chr4:22559116-22566720
            | 20130731
          Length = 1540

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 552/1128 (48%), Positives = 696/1128 (61%), Gaps = 109/1128 (9%)

Query: 1    MISGTATPN------MEVIQEEEPVATSLALQQIEENLFKHSSDGVITIGHRKNGAGVGL 54
            MISGT TPN      +E I+EEEP  TSLALQ+IEENLFKHSS G  +I +RK  A   L
Sbjct: 127  MISGTVTPNSKSNLNLEAIEEEEPATTSLALQEIEENLFKHSSGGA-SIRNRKISAVSAL 185

Query: 55   SPKPAALTKQTLTPTSMAKRKVLANNDVVGSASKRSACPRLVPSSSLKKPD----MAKGP 110
            SPKP +  K+T+   S+AKRK+LA NDV G+  KRSACPR V +SS           K P
Sbjct: 186  SPKPVSSIKKTIPVASLAKRKILAVNDV-GNKYKRSACPRPVITSSSYPCHCLTVTVKTP 244

Query: 111  SKEVKVTRIPGWKSDLPVSTRTTARSGTLSRDSTKRNQNAYP-----------GQSKNPR 159
            SKE K+TRIP  KS    +T TT RSG LS  S+KRNQ A P           G SKNPR
Sbjct: 245  SKESKITRIPVPKSS---ATATTTRSGMLSSGSSKRNQIANPVTNVPKYAGVKGPSKNPR 301

Query: 160  PVASNPKADPAKKCSVTGTLTKLAAKQLNNSVSETHPPSRMYQPGSGANK---------- 209
             VAS PK D A KCSV+ TLTK A K L+NSVS   PPSRM Q G+GANK          
Sbjct: 302  TVASIPKVDLADKCSVSRTLTKPAGKHLDNSVSAIRPPSRMNQTGNGANKVSEAGFPPSK 361

Query: 210  -----------SEACLPQGVSDTVEKKQQTLFQKTKSSGLRMPSPSLGYFXXXXXXXXXX 258
                       SEACLP G+SDT +KKQQTLFQ +KSSGLRMPSPS+G+F          
Sbjct: 362  MHQTGSGANKASEACLPHGISDTDKKKQQTLFQTSKSSGLRMPSPSIGFFSQAKASSSNG 421

Query: 259  XXXXXXXPCNPAVSSIPKVRKSEMISINETRLPLAPRKRSEIIKGAQKNCSEGLSISDVK 318
                   PC P+ S+IPK+RK    S+N+ R        S+ ++GA K  ++ LS+SDVK
Sbjct: 422  QLQKSSIPCKPSESNIPKLRKLGTSSVNDAR--------SKTVQGAAKIRTKELSLSDVK 473

Query: 319  SEPSIQIENKQMVGAEVECDSLGSEKISNHVKVGNILVHVNLKYKEQ-EVHKSENVGSKE 377
            SE  +QI+NK+M  AEVECDS   EKIS   +V NIL  V LK +EQ E+H++++    E
Sbjct: 474  SEIVVQIDNKKM--AEVECDSSSFEKISKQPEVKNILEDVMLKSQEQRELHENDHDSGIE 531

Query: 378  DVVL-PLHENKLLSKSHTNDQLEEEIGHPQDEKLYDILSNGDQSLFQEQQSMDYNSLQRT 436
            ++VL P  E +LL+KSHT++QLE+E     DEKLYD+ SNGDQSL+ E QS +   +Q T
Sbjct: 532  NMVLFPTDEKELLTKSHTHEQLEKETDRAMDEKLYDVSSNGDQSLYVEPQSTNCPIMQET 591

Query: 437  SNNISNTMHNAVEQDEDEEIRPHACDVLTSNENLVLLAEHGASFENSRHSVELKEYSSVK 496
            SNN+SNT+HNA+ QDE+++I+    D+    E LVL A+H  S ++ +HS E KE +SVK
Sbjct: 592  SNNVSNTVHNAIAQDENDQIKGPTYDIPAFKEILVLQADHETSIKDGKHSGEFKECNSVK 651

Query: 497  VALLNSSLTDFSETALGGSIQGIPCKNTEQVDCGAGDFGKYGRDAKVHLLNGNLSVSCNE 556
             ALLN SL DF +T   GS QG PCKNTE+V+CGAG+FG+YG D ++HLLN NLS++CNE
Sbjct: 652  TALLNCSLDDFWKTVPEGSEQGTPCKNTEEVNCGAGEFGRYG-DVQLHLLNENLSINCNE 710

Query: 557  ITQTNLDAVNQQLQGGQLKTSSPSIVGEISSKNENECLIDNCQLVHVAILASKISPQKSV 616
             TQ+NL+AV+QQ  G QLKT   S VGEI S+ EN   +++ Q   V  L SK SP+KS+
Sbjct: 711  TTQSNLEAVSQQFLGEQLKTPFLSSVGEIGSEKENIPDMNSSQPAQVTTLFSKGSPEKSI 770

Query: 617  QEINGATQSESQMTEIEDCHPPVGVQSGLILERPVDEEYDQVIDSKVLHDGTQSFELDIF 676
             EINGA+++ES++ EI+DC  PV  QSG     P+D +YDQVIDSK +HDGT+ FELD  
Sbjct: 771  LEINGASKNESKIAEIKDCQLPVDGQSGFSPRIPMDGQYDQVIDSKAIHDGTREFELDKL 830

Query: 677  R----TVLTTACCTKVYD-SPKRRPFCENNIENLNFT---CPTGKADRYXXXXXXXXXXX 728
                 TV  TACCT V + SP+RRPF ENN+ NL  T   CPT K               
Sbjct: 831  SEGCMTVSATACCTIVTNVSPERRPFPENNVINLRLTPQLCPTVKTGCDSGGNNMPITNS 890

Query: 729  XXXXXXQLREDSFSRETSLHGDVQRDVPGNFEQQA-SMLAYPDINEMLCEDESLVLNHGR 787
                  Q+++ +FS +TS++ +VQ DVPGN EQQA S+  YP+IN++ CEDESLV NHG 
Sbjct: 891  SSISELQIKDGNFSTDTSINCEVQCDVPGNIEQQAGSVFIYPEINKISCEDESLVPNHGH 950

Query: 788  LLHQSEISEVSVDFNSNTKDFIGHGAENPSGFLQGTELAQSVQEFEHTNNEIEEQQARML 847
            L HQSE SEVS D  SN +D IG GAEN SG LQ T+L+ +       ++  E Q+    
Sbjct: 951  LFHQSEFSEVSPDVISNIEDPIGTGAENSSGLLQHTQLSLADNNINACSHLPEFQKPSAA 1010

Query: 848  ANPEINDTVCADESVVPNHDHL---FLQSEFSVSVDFISNT-KDSIGKGAENPSGLLQHT 903
            A          D  VV N  HL   FL +    S +    T  D   +G           
Sbjct: 1011 AT--------VDTQVVNNRLHLDSDFLPTIIVSSAEIKEQTLVDGAFEGC--------RF 1054

Query: 904  ELNQSAPEFEHINREIEESYVEDVQAQIFNENSVADNCNNKHGLSVSIDQLSLEDHNNIK 963
            + N+      H  R+IEES++E+ QAQ F+E  VA +C++KH  ++  DQ SL D NN  
Sbjct: 1055 DTNECGTSNHHNYRDIEESHMEEAQAQSFDEIPVAYDCSSKHCPALINDQFSLADDNNRN 1114

Query: 964  E----------------DSENVDKILHLDGDWLPADIASSEEISEKNLYEGAFEGCNIHI 1007
            E                DS+ V+ ILHLD + +P +IASS EI+E+NL EGAFEG N   
Sbjct: 1115 EDSHLPRLQKPSDVVALDSQRVNNILHLDIECVPTNIASSAEINEQNLVEGAFEGSN--- 1171

Query: 1008 SEHYAYNHHIQAMPENKDGNSNVDEKAELLQINDTRKVSSDISPLVEV 1055
             EH   NHHIQ MPENKD N + DEK ELLQI+   + SSDIS +VEV
Sbjct: 1172 -EHNPSNHHIQDMPENKDANHDGDEKVELLQIDGAEEGSSDISSVVEV 1218