Miyakogusa Predicted Gene

Lj3g3v3086010.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3086010.3 Non Characterized Hit- tr|I3S0K3|I3S0K3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.75,0,seg,NULL;
Root_cap,Root cap; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.45307.3
         (393 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g059630.1 | root cap/late embryogenesis related | HC | chr...   507   e-144
Medtr4g059670.1 | root cap/late embryogenesis related | HC | chr...   491   e-139
Medtr2g080260.1 | root cap/late embryogenesis related | HC | chr...   258   1e-68
Medtr2g080230.1 | root cap/late embryogenesis related | HC | chr...   249   2e-66
Medtr8g464300.1 | root cap/late embryogenesis related | HC | chr...   245   5e-65
Medtr2g030835.1 | root cap/late embryogenesis related | HC | chr...   228   8e-60
Medtr2g030825.1 | late embryogenesis abundant (LEA)-like protein...   225   5e-59
Medtr2g030845.1 | late embryogenesis abundant (LEA)-like protein...   222   5e-58
Medtr2g021580.1 | root cap/late embryogenesis related | HC | chr...   220   2e-57

>Medtr4g059630.1 | root cap/late embryogenesis related | HC |
           chr4:21991918-21993963 | 20130731
          Length = 386

 Score =  507 bits (1305), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 234/309 (75%), Positives = 258/309 (83%), Gaps = 3/309 (0%)

Query: 85  ASEYEVLSALPSGQERAFCKAKNTCQFKTLSCPAECQXXXXXXXXXXXGCFIDCSSKCEA 144
           +S Y+ L  LPSGQERAFCKA NTC F TL CPAEC+           GCFIDCSSKCEA
Sbjct: 81  SSNYQQLQTLPSGQERAFCKANNTCHFATLVCPAECKTRKPKKNKKDKGCFIDCSSKCEA 140

Query: 145 TCKFRKSKCDGYGALCYDPRFVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEG 204
           TCKFR++ CDGYG+LCYDPRFVGGDGVMFYFHGAKGGNFAI SDDEFQINAHFIGTRP+G
Sbjct: 141 TCKFRRANCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQG 200

Query: 205 RTRDYTWVQALSVMFDTHTLVIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANG 264
           RTRDYTWVQALS+MFDTHTLVIAANRV++W+DNVDSL VKWDGE + +PTD +AEW+ NG
Sbjct: 201 RTRDYTWVQALSLMFDTHTLVIAANRVTQWNDNVDSLTVKWDGESVIIPTDDDAEWKTNG 260

Query: 265 XXXXXXXXXXXXXXXXRVTVSGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRF 324
                           RVTVSGLLEMDIRVRPIGEKENK HNYQLPSDDAFAHLETQF+F
Sbjct: 261 DEREVVVERTDDANSVRVTVSGLLEMDIRVRPIGEKENKAHNYQLPSDDAFAHLETQFKF 320

Query: 325 KKHTDSIEGILGQTYRPGYVSPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRFERPSGSA 384
           K  TDSIEG+LGQTYRP YVSPVKRGV MPMMGGEDKYQTP+L+STTCK CRF+RPS   
Sbjct: 321 KNPTDSIEGVLGQTYRPSYVSPVKRGVAMPMMGGEDKYQTPSLFSTTCKLCRFQRPS--- 377

Query: 385 STEGIIAQY 393
           +++G+IAQY
Sbjct: 378 TSQGLIAQY 386


>Medtr4g059670.1 | root cap/late embryogenesis related | HC |
           chr4:22009293-22011297 | 20130731
          Length = 395

 Score =  491 bits (1265), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 228/309 (73%), Positives = 259/309 (83%), Gaps = 4/309 (1%)

Query: 85  ASEYEVLSALPSGQERAFCKAKNTCQFKTLSCPAECQXXXXXXXXXXXGCFIDCSSKCEA 144
           +S+YE L AL SGQER FC+A+NTC FKTL CP EC+           GCFIDC+ KCEA
Sbjct: 91  SSKYESLPALQSGQERGFCQAQNTCHFKTLVCPEECKQRKPKKNKKDKGCFIDCN-KCEA 149

Query: 145 TCKFRKSKCDGYGALCYDPRFVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEG 204
           TCKFR+  CDGYG+LCYDPRFVGGDGVMFYFHGAKGGNFAI SDD+FQINAHFIGTRP+G
Sbjct: 150 TCKFRRPNCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDDFQINAHFIGTRPQG 209

Query: 205 RTRDYTWVQALSVMFDTHTLVIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANG 264
           RTRDYTWVQALSVMFDTHTLVIAANRV++W+D VDSL VKWDGE +++P+DG+AEW+++G
Sbjct: 210 RTRDYTWVQALSVMFDTHTLVIAANRVTQWNDKVDSLTVKWDGELVTIPSDGDAEWKSSG 269

Query: 265 XXXXXXXXXXXXXXXXRVTVSGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRF 324
                           RVTVSGLLEMDIRVRPIGEKENK HNYQLPSDDAFAHLETQF+F
Sbjct: 270 NQREVIVERTDDANSVRVTVSGLLEMDIRVRPIGEKENKAHNYQLPSDDAFAHLETQFKF 329

Query: 325 KKHTDSIEGILGQTYRPGYVSPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRFERPSGSA 384
           K  TDSIEG+LGQTYRP YVSPVKRGV MPMMGGEDKYQTP+L+STTCK CRF+RPS   
Sbjct: 330 KNPTDSIEGVLGQTYRPSYVSPVKRGVAMPMMGGEDKYQTPSLFSTTCKLCRFQRPS--- 386

Query: 385 STEGIIAQY 393
           +++G+IA+Y
Sbjct: 387 TSQGLIAEY 395


>Medtr2g080260.1 | root cap/late embryogenesis related | HC |
           chr2:33879944-33878075 | 20130731
          Length = 341

 Score =  258 bits (658), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 121/289 (41%), Positives = 175/289 (60%), Gaps = 5/289 (1%)

Query: 106 KNTCQFKTLSCPAECQXXXXXXXXXXXGCFIDCSSK-CEATCKFRKSKCDGYGALCYDPR 164
           K+ C  K L CPA+C             C++DC S  C+  CK RK+ C+G G+ C DPR
Sbjct: 38  KSRCFLKKLPCPAQCPSRSPANPREKV-CYLDCDSPMCKTQCKSRKANCNGRGSACLDPR 96

Query: 165 FVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEGRTRDYTWVQALSVMFDTHTL 224
           FVG DG++FYFHG +  +F++ SD   QINA FIG RP+GR RDYTW+QAL V+FD+H  
Sbjct: 97  FVGADGIVFYFHGRRNEHFSLVSDTNLQINARFIGLRPQGRPRDYTWIQALGVLFDSHNF 156

Query: 225 VIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANGXXXXXXXXXXXXXXXXRVTV 284
            I A   S WDD VD L + +DG+++ +P    + W++                   VT+
Sbjct: 157 SIEATPSSIWDDEVDHLKLSYDGKDLVIPEGHLSTWQSE--ENQLRVERTSNENGVMVTI 214

Query: 285 SGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRFKKHTDSIEGILGQTYRPGYV 344
             + E+ + V P+ ++++++HNYQ+P DD FAHL+ QF+F   +  +EG+LG+TY+P + 
Sbjct: 215 PEVAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLDVQFKFYGLSSKVEGVLGRTYQPDFQ 274

Query: 345 SPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRFERPSGSASTEGIIAQY 393
           +P K GV MP++GGEDKY+T +L S  C  C F     S   EG+  +Y
Sbjct: 275 NPAKPGVAMPVVGGEDKYRTKSLVSADCLACIFSSAKDSVQ-EGMEIEY 322


>Medtr2g080230.1 | root cap/late embryogenesis related | HC |
           chr2:33875585-33873975 | 20130731
          Length = 341

 Score =  249 bits (637), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 119/289 (41%), Positives = 172/289 (59%), Gaps = 5/289 (1%)

Query: 106 KNTCQFKTLSCPAECQXXXXXXXXXXXGCFIDCSSK-CEATCKFRKSKCDGYGALCYDPR 164
           K+ C  K L CPA+C             C++DC S  C+  CK RK  C+G G+ C DPR
Sbjct: 38  KSRCFLKKLPCPAQCPSRSPANPKDKV-CYLDCDSPVCKTQCKSRKPNCNGRGSACLDPR 96

Query: 165 FVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEGRTRDYTWVQALSVMFDTHTL 224
           FVG DG++FYFHG +  +F++ SD   QINA FIG RP+ R RDYTW+QAL V+FD+H  
Sbjct: 97  FVGADGIVFYFHGRRNEHFSLVSDVNLQINARFIGLRPQRRPRDYTWIQALGVLFDSHNF 156

Query: 225 VIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANGXXXXXXXXXXXXXXXXRVTV 284
            I A   S WDD VD L + +DG+E+ +P    + W++                   VT+
Sbjct: 157 SIEATPSSSWDDEVDHLKLSYDGKELVIPGGHLSTWQSEENQLRVERTSNENSVI--VTI 214

Query: 285 SGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRFKKHTDSIEGILGQTYRPGYV 344
             + E+ + V P+ ++++++HNYQ+P DD F+HLE QF+F   +  +EG+LG+TY+P + 
Sbjct: 215 PEVAEISVNVVPVTKEDSRIHNYQIPDDDCFSHLEVQFKFYGLSSKVEGVLGRTYQPDFQ 274

Query: 345 SPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRFERPSGSASTEGIIAQY 393
           +  K GV MP++GGE+KY+T +L S  C  C F     S   EG+  +Y
Sbjct: 275 NAAKPGVAMPVVGGEEKYRTTSLVSGDCLACIFSSAKDSVQ-EGMEIEY 322


>Medtr8g464300.1 | root cap/late embryogenesis related | HC |
           chr8:22720266-22717548 | 20130731
          Length = 341

 Score =  245 bits (626), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 117/286 (40%), Positives = 168/286 (58%), Gaps = 4/286 (1%)

Query: 106 KNTCQFKTLSCPAECQXXXXXXXXXXXGCFIDCSSK-CEATCKFRKSKCDGYGALCYDPR 164
           K+ C  K + CPAEC             C +DC+S  C+A CK  K  C+G G+ C DPR
Sbjct: 38  KSPCFTKKIQCPAECPLKSPSDPNAKI-CSLDCASPVCKAQCKQSKPNCNGRGSACLDPR 96

Query: 165 FVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEGRTRDYTWVQALSVMFDTHTL 224
           FVG DG++FYFHG    +F + SD   QINA FIG RPEGRTRDYTW+QAL ++F++H  
Sbjct: 97  FVGADGIVFYFHGRSNEHFTLVSDPNVQINARFIGLRPEGRTRDYTWIQALGILFESHKF 156

Query: 225 VIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANGXXXXXXXXXXXXXXXXRVTV 284
            + A + + W D +D L   ++GEE+ +P    + W                     V V
Sbjct: 157 TVEATKAAIWKDEIDHLKFSYNGEELQIPQGYLSTWEI--PEKKINVERTSNINSVVVNV 214

Query: 285 SGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRFKKHTDSIEGILGQTYRPGYV 344
            G++E+ + V P+ ++++++HNYQ+P  D FAHLE QF+F   +  +EG+LG+TY+P + 
Sbjct: 215 QGVVEIYVNVVPVTKEDSRIHNYQIPDSDCFAHLEVQFKFYDLSSKVEGVLGRTYQPDFE 274

Query: 345 SPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRFERPSGSASTEGII 390
           +P K GV MP++GGED+Y+TP+L S  C  C F     S     +I
Sbjct: 275 NPAKLGVAMPVVGGEDRYRTPSLLSADCGACLFASGEDSEKKNNVI 320


>Medtr2g030835.1 | root cap/late embryogenesis related | HC |
           chr2:11663347-11664765 | 20130731
          Length = 330

 Score =  228 bits (581), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 117/309 (37%), Positives = 166/309 (53%), Gaps = 28/309 (9%)

Query: 90  VLSALPSGQERAFCKAKNTCQFKTLS--------CPAECQXXXXXXXXXXXGCFIDCSSK 141
           V +A P G  +       TC+ K           CP  C             C ++C+S 
Sbjct: 19  VEAASPPGNAKGRGNGYATCKIKKYKHCYNSVHVCPKSCPYD----------CTVECAS- 67

Query: 142 CEATCKFRKSKCDGYGALCYDPRFVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTR 201
           C+  C      CD  GA+C DPRF+GGDG+ FYFHG K  NF + SD+   INAHFIG R
Sbjct: 68  CKPICT-----CDKPGAVCQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGRR 122

Query: 202 PEGRTRDYTWVQALSVMFDTHTLVIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWR 261
            E   RD+TWVQ++ ++FD H L + A + S WDD+VD L + +DGE I++     A+W 
Sbjct: 123 NENMKRDFTWVQSIVILFDNHQLFLGAQKTSTWDDSVDRLALSFDGEPITLNESEGAKWE 182

Query: 262 ANGXXXXXXXXXXXXXXXXRVTVSGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQ 321
           ++G                 V V G   +  +V PI E+++++HNY +  DD FAHL+  
Sbjct: 183 SSGVSFVRETSTNNII----VEVEGNFRITAKVVPITEEDSRIHNYGITKDDCFAHLDLG 238

Query: 322 FRFKKHTDSIEGILGQTYRPGYVSPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRFERPS 381
           F+F   ++ + G+LGQTY+P YVS V  G  MP+MGG  +Y+T +L+S  C   RF   +
Sbjct: 239 FKFLSLSNEVNGVLGQTYKPNYVSRVNIGAKMPIMGGGKEYETSSLFSPDCSVARFIGNN 298

Query: 382 GSASTEGII 390
           G     GI+
Sbjct: 299 GLNKNIGIV 307


>Medtr2g030825.1 | late embryogenesis abundant (LEA)-like protein |
           LC | chr2:11653982-11656243 | 20130731
          Length = 595

 Score =  225 bits (574), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 114/279 (40%), Positives = 159/279 (56%), Gaps = 22/279 (7%)

Query: 101 AFCKAKN--TCQFKTLSCPAECQXXXXXXXXXXXGCFIDCSSKCEATCKFRKSKCDGYGA 158
           A C  KN   C     +CP  C+           GC +DC++ C+  CK     CD  GA
Sbjct: 301 ARCGNKNYPKCYNMEHACPNACRG----------GCEVDCNT-CKPICK-----CDKPGA 344

Query: 159 LCYDPRFVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEGRTRDYTWVQALSVM 218
           +C DPRF+GGDG+ FYFHG K  NF + SD    INAHFIG R E   RD+TWVQ++ ++
Sbjct: 345 VCQDPRFIGGDGITFYFHGKKDNNFCLVSDKNLHINAHFIGRRNENMKRDFTWVQSIVIL 404

Query: 219 FDTHTLVIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANGXXXXXXXXXXXXXX 278
           FD H L + A + + WDD+VD L + +DGE I++     A+W ++G              
Sbjct: 405 FDNHQLFLGAQKTATWDDSVDRLAISFDGEPITLHESEGAKWESSGVSFVRETSTNNII- 463

Query: 279 XXRVTVSGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRFKKHTDSIEGILGQT 338
              V V G   +  +V PI E++++VHNY +  DD FAHL+  F+F   ++ + G+LGQT
Sbjct: 464 ---VEVEGNFRITAKVVPITEEDSRVHNYGITKDDCFAHLDLGFKFLSLSNEVSGVLGQT 520

Query: 339 YRPGYVSPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRF 377
           Y+P YVS V  G  MP+MGG  +Y+T +L+S  C   RF
Sbjct: 521 YKPNYVSRVNIGAKMPIMGGGKEYETTSLFSPDCSVARF 559


>Medtr2g030845.1 | late embryogenesis abundant (LEA)-like protein |
           LC | chr2:11667751-11669978 | 20130731
          Length = 596

 Score =  222 bits (565), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 113/279 (40%), Positives = 158/279 (56%), Gaps = 22/279 (7%)

Query: 101 AFCKAKN--TCQFKTLSCPAECQXXXXXXXXXXXGCFIDCSSKCEATCKFRKSKCDGYGA 158
           A C  KN   C     +CP  C+           GC +DC++ C+  CK     CD  GA
Sbjct: 302 ARCGNKNYPKCYNMEHACPNACRG----------GCEVDCNT-CKPICK-----CDKPGA 345

Query: 159 LCYDPRFVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEGRTRDYTWVQALSVM 218
           +C DPRF+GGDG+ FYFHG K  NF + SD    INAHFIG R E   RD+TWVQ++ ++
Sbjct: 346 VCQDPRFIGGDGITFYFHGKKDNNFCLVSDKNLHINAHFIGRRNENMKRDFTWVQSIVIL 405

Query: 219 FDTHTLVIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANGXXXXXXXXXXXXXX 278
           FD H L + A + + WDD+VD L + +DGE I++     A+W ++G              
Sbjct: 406 FDNHQLFLGAQKTATWDDSVDRLAISFDGEPITLHESEGAKWESSGVSFVRETSTNNII- 464

Query: 279 XXRVTVSGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRFKKHTDSIEGILGQT 338
              V V G   +  +V PI E++++VHNY +  DD FAHL+  F+F   ++ + G+LGQT
Sbjct: 465 ---VEVEGNFRITAKVVPITEEDSRVHNYGITKDDCFAHLDLGFKFLSLSNEVSGVLGQT 521

Query: 339 YRPGYVSPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRF 377
           Y+  YVS V  G  MP+MGG  +Y+T +L+S  C   RF
Sbjct: 522 YKSNYVSRVNIGAKMPIMGGGKEYETTSLFSPDCSVARF 560


>Medtr2g021580.1 | root cap/late embryogenesis related | HC |
           chr2:7345117-7343803 | 20130731
          Length = 331

 Score =  220 bits (561), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 105/249 (42%), Positives = 150/249 (60%), Gaps = 6/249 (2%)

Query: 134 CFIDCSSKCEATCKFRKSKCDGYGALCYDPRFVGGDGVMFYFHGAKGGNFAIASDDEFQI 193
           C  DC+ +C A+CK   S CD  GA+C DPRF+GGDG+ FYFHG K  NF + SD+   I
Sbjct: 58  CPYDCTVEC-ASCKPICS-CDKPGAVCQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHI 115

Query: 194 NAHFIGTRPEGRTRDYTWVQALSVMFDTHTLVIAANRVSKWDDNVDSLIVKWDGEEISVP 253
           NAHFIG R +   RD+TWVQ++ ++FD H L + A + S WDD+VD L + +DGE I++ 
Sbjct: 116 NAHFIGRRNKNMKRDFTWVQSIVILFDNHQLFLGAKKTSTWDDSVDRLALSFDGEPITLH 175

Query: 254 TDGEAEWRANGXXXXXXXXXXXXXXXXRVTVSGLLEMDIRVRPIGEKENKVHNYQLPSDD 313
                +W ++                  V V G   +  +V PI E+++++HNY +  DD
Sbjct: 176 ESEGTKWESSSVSIVRETSTNNII----VEVEGNFRITAKVVPITEEDSRIHNYGITKDD 231

Query: 314 AFAHLETQFRFKKHTDSIEGILGQTYRPGYVSPVKRGVPMPMMGGEDKYQTPTLYSTTCK 373
            FAHL+  F+F   ++ + G+LGQTY+P YVS V  G  MP+MGG  +Y+T +L+S  C 
Sbjct: 232 CFAHLDLGFKFLSLSNEVSGVLGQTYKPNYVSRVNIGARMPIMGGAKEYETSSLFSPDCS 291

Query: 374 HCRFERPSG 382
             RF   +G
Sbjct: 292 VARFIGNTG 300