Miyakogusa Predicted Gene

Lj3g3v3053420.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3053420.2 Non Characterized Hit- tr|C6TGZ1|C6TGZ1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56817
PE,93.96,0,coiled-coil,NULL; Snf7,Snf7; CHARGED MULTIVESICULAR BODY
PROTEIN 3,NULL; CHARGED MULTIVESICULAR BODY,CUFF.45199.2
         (150 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g057565.1 | vacuolar sorting-associated-like protein | HC ...   286   4e-78
Medtr1g069715.1 | cytochrome P450 family protein | LC | chr1:303...    77   6e-15
Medtr7g097170.1 | charged multivesicular body protein | HC | chr...    73   9e-14
Medtr2g041190.1 | charged multivesicular body protein | HC | chr...    70   5e-13
Medtr8g019700.1 | charged multivesicular body protein | HC | chr...    70   5e-13
Medtr2g047875.1 | charged multivesicular body protein | HC | chr...    69   2e-12

>Medtr4g057565.1 | vacuolar sorting-associated-like protein | HC |
           chr4:21106196-21110863 | 20130731
          Length = 227

 Score =  286 bits (733), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 139/150 (92%), Positives = 148/150 (98%)

Query: 1   MEKVINILKPKPNPQQLLRDWQRKLRQECRNVERQIRDIQREEKSVQKAIREAAKRNDMG 60
           MEKV+NILKPKPNPQQLLRDWQRKLRQECRN+ERQIRDIQREEK+VQKAI+EAAKRND+G
Sbjct: 1   MEKVMNILKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKEAAKRNDIG 60

Query: 61  SAKALAKELVRSRKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNDLM 120
           SAKALA ELVRSRKTVNRL+ENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVN+LM
Sbjct: 61  SAKALATELVRSRKTVNRLYENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPQMAVTMQEFSKEMTKAGVIEEMVNDAV 150
           KAP+MAV MQEFSKEMTKAGVIEE+VNDAV
Sbjct: 121 KAPEMAVAMQEFSKEMTKAGVIEEIVNDAV 150


>Medtr1g069715.1 | cytochrome P450 family protein | LC |
           chr1:30367208-30373894 | 20130731
          Length = 677

 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 84/150 (56%)

Query: 1   MEKVINILKPKPNPQQLLRDWQRKLRQECRNVERQIRDIQREEKSVQKAIREAAKRNDMG 60
           M K +NI   KP P+++LR+ +R++    R +E++I  +Q EEK +   I++ AK  +  
Sbjct: 462 MMKNLNIFSKKPKPKEVLRESKREMANATRGIEKEIGALQLEEKKLVAEIKKTAKTGNEA 521

Query: 61  SAKALAKELVRSRKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNDLM 120
           + K LA++LVR R+ +  L  ++AQ+  I+ H     A +     +  +++ M+ +N  M
Sbjct: 522 ATKILARQLVRLRQQIANLQGSRAQMRGIATHTQALYAQSSISAGMKGASKAMEAMNKQM 581

Query: 121 KAPQMAVTMQEFSKEMTKAGVIEEMVNDAV 150
              + A  +QEF K+  +  +  EM+ DA+
Sbjct: 582 APTKQAKIIQEFQKQSAQMDITTEMMADAI 611


>Medtr7g097170.1 | charged multivesicular body protein | HC |
           chr7:39086171-39082366 | 20130731
          Length = 212

 Score = 73.2 bits (178), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 10/148 (6%)

Query: 5   INILKPKPNPQQLLRDWQRKLRQECRNVERQIRDIQREEKSVQKAIREAAKRNDMGSAKA 64
           +NI   KP  ++ LR+ +R++    R +ER+I  +Q EEK +   I+  AK  + G+ K 
Sbjct: 1   MNIFTKKPTAKEALRESKREMTNATRGIEREIGSLQLEEKKLVAEIKRTAKTGNEGATKV 60

Query: 65  LAKELVRSRKTVNRLHENKAQLNSI-----SMHLGESVAIARTVGHLSKSAEVMKLVNDL 119
           LA++L+R R+ +  L  ++AQ+  I     +MH   SVA+      +  + + M  +N  
Sbjct: 61  LARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVG-----MKGATKAMAAMNKQ 115

Query: 120 MKAPQMAVTMQEFSKEMTKAGVIEEMVN 147
           M+  + A  MQEF K+  +  +  EM++
Sbjct: 116 MEPAKQAKVMQEFQKQSAQMDMTTEMMS 143


>Medtr2g041190.1 | charged multivesicular body protein | HC |
           chr2:18065645-18070228 | 20130731
          Length = 223

 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 84/145 (57%), Gaps = 2/145 (1%)

Query: 7   ILKPKPNPQQLLRDWQRKLRQECRNVERQIRDIQREEKSVQKAIREAAKRNDMGSAKALA 66
           I   +  P +LLR+ +R L +  R +ER+ + +Q +EK +   I+++AK+  MG+ + +A
Sbjct: 4   IFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVRVMA 63

Query: 67  KELVRSRKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKS-AEVMKLVNDLMKAPQM 125
           K+LVR+R  + + ++ K+QL  +S+ + +++   + +G   K   + M  +N  M  P +
Sbjct: 64  KDLVRTRHQIEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPNL 122

Query: 126 AVTMQEFSKEMTKAGVIEEMVNDAV 150
              MQ+F ++  K  +  E++ DA+
Sbjct: 123 QKIMQDFERQNEKMELTMEVMGDAI 147


>Medtr8g019700.1 | charged multivesicular body protein | HC |
           chr8:7006345-7009232 | 20130731
          Length = 224

 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 84/145 (57%), Gaps = 2/145 (1%)

Query: 7   ILKPKPNPQQLLRDWQRKLRQECRNVERQIRDIQREEKSVQKAIREAAKRNDMGSAKALA 66
           +   +  P +LLR+ +R L +  R +ER+ + +Q +EK +   I++ AK+  MG+ + +A
Sbjct: 4   LFGSRKTPAELLRENKRMLDKSIREIERERQGLQSQEKKLIGEIKKNAKQGQMGAVRVMA 63

Query: 67  KELVRSRKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKS-AEVMKLVNDLMKAPQM 125
           K+L+R+R  + + ++ K+QL  +++ + +++   + +G   K   + M  +N  M  P +
Sbjct: 64  KDLIRTRHQIEKFYKLKSQLQGVALRI-QTLKSTQAMGDAMKGVTKAMGQMNRQMNLPSL 122

Query: 126 AVTMQEFSKEMTKAGVIEEMVNDAV 150
              MQEF ++  K  ++ E++ DA+
Sbjct: 123 QKIMQEFERQNEKMELVSEVMGDAI 147


>Medtr2g047875.1 | charged multivesicular body protein | HC |
           chr2:20962877-20956118 | 20130731
          Length = 216

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 77/146 (52%)

Query: 5   INILKPKPNPQQLLRDWQRKLRQECRNVERQIRDIQREEKSVQKAIREAAKRNDMGSAKA 64
           +NI K K  P++ LR  +R++    R +ER+I  +Q EEK +   I+  AK  +  S K 
Sbjct: 1   MNIFKKKTTPKEALRQSKREMSVATRGIEREIASLQMEEKKLVAEIKREAKTGNEASTKI 60

Query: 65  LAKELVRSRKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNDLMKAPQ 124
           LA++LVR R+ +  L  ++AQ+  ++ H     A       +  + + M  +N  M   +
Sbjct: 61  LARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAK 120

Query: 125 MAVTMQEFSKEMTKAGVIEEMVNDAV 150
            A  +QEF K+  +  +  EM+++++
Sbjct: 121 QAKVIQEFQKQSAQLDMTIEMMSESI 146