Miyakogusa Predicted Gene

Lj3g3v3043330.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3043330.2 CUFF.45186.2
         (494 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g057493.1 | hypothetical protein | HC | chr4:21044673-2103...   646   0.0  

>Medtr4g057493.1 | hypothetical protein | HC |
           chr4:21044673-21038663 | 20130731
          Length = 455

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/447 (69%), Positives = 358/447 (80%)

Query: 45  MDDPLDFEVEDELLKPLPINKKRKKAIGLDDLLQDHYNEQDKLLEXXXXXXXXXXXXXXX 104
           MDDPLDFE++D+LL PLPINKKRKK IGLDDLL +HY EQ+KL E               
Sbjct: 1   MDDPLDFELQDDLLVPLPINKKRKKVIGLDDLLNEHYKEQEKLAEKQKKQAKKKAKANEK 60

Query: 105 SSYDDEDRQEALVTRLVEKCHNQLQAFGDEPEIPVWGVTVFGEKKAFPPLDFPDLGSCNI 164
             YDDEDR+EA + RLVEKCHNQL+AFG+E EIPVWGV VFGE+K FP LDFPDLGSCN 
Sbjct: 61  KKYDDEDRKEAHLNRLVEKCHNQLKAFGEENEIPVWGVEVFGEQKPFPRLDFPDLGSCNF 120

Query: 165 FQSFLNNKLNSVVELAADKGDIFFEGLLVNGWLSRLAFLCGHIEKPVAIWAFNTMLYSSK 224
            QSFLNN+LNSVVELAADKGD F EGLLVNGWLS+LAFL GH+EKPVA+WAFN+MLYSSK
Sbjct: 121 IQSFLNNRLNSVVELAADKGDSFLEGLLVNGWLSKLAFLSGHVEKPVALWAFNSMLYSSK 180

Query: 225 VELLNSSCDFWCAILSSGKEVDQFPVKIDWFPQFTDLRRALDIYGFLFKFSSSAEDIILD 284
            EL NSS DFWC ILSSG E DQF VK+DWFP++ DLR ALD YGFLFKFSSSA     D
Sbjct: 181 EELQNSSSDFWCEILSSGNEADQFSVKVDWFPEYKDLRSALDTYGFLFKFSSSAAHESSD 240

Query: 285 SEMGGPPQNIRAWIRFVTACCLIRTKRAIFSTXXXXXXXXXXXCLLLDRQFQGLLVLLND 344
           S  GGPPQNIRAWIRFVT CC I++K+AI ST           C+ LDR+FQGLLVLL D
Sbjct: 241 SNNGGPPQNIRAWIRFVTYCCRIKSKKAILSTIEAEEIVEIIICMFLDRRFQGLLVLLYD 300

Query: 345 CMQAIVNYFTDQEWHSSCENIAKFIACRVSKDLNCIQAVECISEASSRCKQLRCAVAYQS 404
           C+QA+V+YFTDQEW SSCEN+AKFIACRVS+DLNCI+ VEC+SE SSRC+QLR A+AYQ+
Sbjct: 301 CLQAVVDYFTDQEWCSSCENVAKFIACRVSEDLNCIRTVECVSEDSSRCRQLRSAIAYQT 360

Query: 405 LLSCFDEANCGEEVLESLTMINFKAKSCDFFKMYIHLVLTENWVLSTSLVGDNPVIDERF 464
           +L CFD AN GEE+L+SL  IN K KSCDFFK+YIHLVL +NW+LS + V DN VI E F
Sbjct: 361 MLFCFDGANNGEEILKSLDAINLKHKSCDFFKLYIHLVLAKNWILSNNSVEDNEVIHEMF 420

Query: 465 CQFLKHCSSLISATDLRSYAAKVNARA 491
           C FL++CS+ IS TDLRSYA++V  +A
Sbjct: 421 CSFLRNCSTFISPTDLRSYASEVRHKA 447