Miyakogusa Predicted Gene
- Lj3g3v3033290.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3033290.1 tr|Q2PEZ1|Q2PEZ1_TRIPR DNA ligase (Fragment)
OS=Trifolium pratense PE=2 SV=1,82.68,0,coiled-coil,NULL;
DNA_LIGASE_A3,DNA ligase, ATP-dependent, central; DNA_ligase_A_M,DNA
ligase, ATP-d,CUFF.45181.1
(776 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g057345.1 | DNA ligase I, ATP-dependent protein | HC | chr... 1194 0.0
Medtr4g057340.1 | DNA ligase I, ATP-dependent protein | HC | chr... 1075 0.0
Medtr8g468400.1 | DNA ligase I, ATP-dependent protein | HC | chr... 934 0.0
Medtr7g082860.1 | ATP-dependent DNA ligase | HC | chr7:31777246-... 496 e-140
Medtr7g082860.2 | ATP-dependent DNA ligase | HC | chr7:31777246-... 458 e-128
Medtr7g082860.3 | ATP-dependent DNA ligase | HC | chr7:31777246-... 419 e-117
Medtr7g082860.4 | ATP-dependent DNA ligase | HC | chr7:31777246-... 383 e-106
Medtr7g082860.5 | ATP-dependent DNA ligase | HC | chr7:31777246-... 289 8e-78
Medtr2g038030.1 | DNA ligase | HC | chr2:16517930-16532770 | 201... 134 4e-31
Medtr2g038030.2 | DNA ligase | HC | chr2:16517930-16532770 | 201... 133 6e-31
>Medtr4g057345.1 | DNA ligase I, ATP-dependent protein | HC |
chr4:20998007-21005716 | 20130731
Length = 777
Score = 1194 bits (3088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/776 (76%), Positives = 649/776 (83%), Gaps = 27/776 (3%)
Query: 2 IHFRPYLSPPFLSHHRITAVK-----LFSLPFLTLPRRAMSK--PPSAFDALMSGXXXXX 54
+HF+ S PF + + + + SLP ++PRRAMS PPSAFD LMSG
Sbjct: 4 LHFKSCFSLPFTTRISVKSSSSLFPFILSLPLSSIPRRAMSSKPPPSAFDKLMSGARAAA 63
Query: 55 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVQPPRD---SVETVQPSSEEA 111
+TVQ P + ++ETVQ E
Sbjct: 64 KKKPSPPSSSPKKRKSPTPPSPLKTP-----------DTVQNPNNNLKTLETVQKPEETV 112
Query: 112 VETVLQPAKKICNSSGS---LIAELKELAPRLKKKPSEFDPSTVVCWEKGKPVPFLFLCL 168
E +P KI N+S S ++AELKE P+LKKKP+ FDPS+VVCWEK KPVPFLFLCL
Sbjct: 113 HE---EPPSKIRNTSSSSKGIVAELKEKVPQLKKKPASFDPSSVVCWEKDKPVPFLFLCL 169
Query: 169 AFDMIDKESGRIVITDIACNLLRTVIHATPEDLVPVVYFLANRIAPAHEGLELGIGDASI 228
AFDMI++ESGRIVITDI CNLLRTVIHATPEDLVPVVY ANRIAPAHEGLELGIGDASI
Sbjct: 170 AFDMINEESGRIVITDIVCNLLRTVIHATPEDLVPVVYLSANRIAPAHEGLELGIGDASI 229
Query: 229 IKALAESCGRTESQIRKLNKDRGDLGLVAKECRSSQSMMRKPDALTIRKVFTIFRLIAKE 288
IKALAE+CGRTE QI+ K++GDLGLVAK RSSQSMMRKPDALTIRKVF F LIAKE
Sbjct: 230 IKALAEACGRTEQQIKIQYKEKGDLGLVAKASRSSQSMMRKPDALTIRKVFKTFHLIAKE 289
Query: 289 SGKDSQEKKKNHIKSLLVAATDCEPIYLIRLLQTKLRIGLAEQTLLASLGQAAVYTEEHS 348
SGKDSQEKKKNHIKSLLVAATDCEP+Y+IRLLQTKLRIG AEQTLL +LGQAAVYTEEHS
Sbjct: 290 SGKDSQEKKKNHIKSLLVAATDCEPLYIIRLLQTKLRIGYAEQTLLTALGQAAVYTEEHS 349
Query: 349 KPPPEIQSPLEEAAKIVKQVYSVLPDYDKVLSSLLKDGVWKLPKTCKFTLGVPVGPMLSK 408
KPPPEIQSP EEAAKIVK+VYSVLPDYDK++S+LLKDGVW+LPK C FT GVPVGPMLSK
Sbjct: 350 KPPPEIQSPFEEAAKIVKKVYSVLPDYDKIVSALLKDGVWELPKKCDFTPGVPVGPMLSK 409
Query: 409 PTKGVSEILNKFQDVEFTCEYKYDGERAQIHYMENGSVEVYSRNAEWNTGKFPDVVAAVS 468
TKGVSEILNKFQDVEFTCEYKYDGERAQIH++ENGSVE+YSRNAE NTGKFPDVV AVS
Sbjct: 410 ATKGVSEILNKFQDVEFTCEYKYDGERAQIHFLENGSVEIYSRNAERNTGKFPDVVTAVS 469
Query: 469 RLKKTSVSSFVLDCEVVAYDRAKQRILPFQVLSTRARKNVAVSDIKVDVCIFAFDLLYLN 528
RLKKTSV+SF+LDCE+VAYDR KQRILPFQVLSTRARKNVA+SDIKVDVC+FAFDLLYLN
Sbjct: 470 RLKKTSVTSFILDCELVAYDRTKQRILPFQVLSTRARKNVALSDIKVDVCVFAFDLLYLN 529
Query: 529 GQILLQENLKTRREHLYASFEEESGYFQFATAITSNDVEEIQKFLDKAIGASSEGLIIKT 588
GQ LLQENLK RREHLY SF+EESG+FQFAT+ TSNDVEEIQKFLDKAI AS EGLIIKT
Sbjct: 530 GQALLQENLKIRREHLYTSFDEESGFFQFATSTTSNDVEEIQKFLDKAIDASCEGLIIKT 589
Query: 589 LNEDATYEPSKRSLNWLKLKKDYMDNIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDNS 648
L+EDATYEPSKRSLNWLKLKKDYM+NIGDSLDLVPI AFHGRGKRTGVYGAFLLACYDN
Sbjct: 590 LHEDATYEPSKRSLNWLKLKKDYMENIGDSLDLVPIGAFHGRGKRTGVYGAFLLACYDND 649
Query: 649 NEEFQSICKIGTGFSEDVLIERSKGLQTKVIPKPKAYYRYAETINPDVWFEASEVWEVKA 708
NEEFQSICKIGTGF E+VL ERS L++KVIPKPKAYY+ E+INPDVWF+ASEVWEVKA
Sbjct: 650 NEEFQSICKIGTGFKEEVLEERSTSLRSKVIPKPKAYYKCGESINPDVWFDASEVWEVKA 709
Query: 709 ADLTISPVYRAAVGIVDSNKGISLRFPRLLRVRPDKDPEQATSSEQVAEMYNAQKH 764
ADLTISPVYRAAVGIVDSNKGISLRFPRL+RVRPDK PEQA+SSEQVAEMYNAQKH
Sbjct: 710 ADLTISPVYRAAVGIVDSNKGISLRFPRLVRVRPDKAPEQASSSEQVAEMYNAQKH 765
>Medtr4g057340.1 | DNA ligase I, ATP-dependent protein | HC |
chr4:20987930-20995092 | 20130731
Length = 733
Score = 1075 bits (2779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/728 (73%), Positives = 592/728 (81%), Gaps = 16/728 (2%)
Query: 39 PPSAFDALMSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVQPPR 98
PPSAFD L+SG ETV P
Sbjct: 6 PPSAFDKLLSGARASKKKLPPPSSSKKRKAPTPPPSSSPHKTL----------ETVINPN 55
Query: 99 DSVETVQPSSEEAVETVLQPAKKICNSSGS---LIAELKELAPRLKKKPSEFDPSTVVCW 155
++++TVQ E E P+ KI N+S S ++AELKE P LKKKP FDPS+VVCW
Sbjct: 56 NNLKTVQNPEETVHE---DPSSKIRNTSSSSNGIVAELKEKVPELKKKPENFDPSSVVCW 112
Query: 156 EKGKPVPFLFLCLAFDMIDKESGRIVITDIACNLLRTVIHATPEDLVPVVYFLANRIAPA 215
EK KPVPFLFL LAFD+I KE GRIVIT+I CNLLRTVIHATP+DLVPVVY AN+IAPA
Sbjct: 113 EKNKPVPFLFLSLAFDLISKERGRIVITEIVCNLLRTVIHATPDDLVPVVYLSANKIAPA 172
Query: 216 HEGLELGIGDASIIKALAESCGRTESQIRKLNKDRGDLGLVAKECRSSQSMMRKPDALTI 275
++GLELGIGDASII+ALA++CGRTE I+ K +GDLGLVA+ RSSQ+ MRK DALTI
Sbjct: 173 YKGLELGIGDASIIRALADACGRTEKHIKSQYKKKGDLGLVAQASRSSQTTMRKHDALTI 232
Query: 276 RKVFTIFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPIYLIRLLQTKLRIGLAEQTLLA 335
RKVF F LIAKESGKDSQEKKKNHIKSLL AATDCEP+Y+IRLLQTKLRIG AEQTLLA
Sbjct: 233 RKVFDTFHLIAKESGKDSQEKKKNHIKSLLFAATDCEPLYIIRLLQTKLRIGYAEQTLLA 292
Query: 336 SLGQAAVYTEEHSKPPPEIQSPLEEAAKIVKQVYSVLPDYDKVLSSLLKDGVWKLPKTCK 395
+LGQAAV+TEEHS PPP I+SPLEEAAKIVK+VYSVLPDYDK++S+LLKDGVW+LPK C
Sbjct: 293 ALGQAAVHTEEHSNPPPGIKSPLEEAAKIVKKVYSVLPDYDKIVSALLKDGVWELPKKCD 352
Query: 396 FTLGVPVGPMLSKPTKGVSEILNKFQDVEFTCEYKYDGERAQIHYMENGSVEVYSRNAEW 455
FT GVPVGPMLSK TK VSEILNKFQ VEFTCEYKYDGERAQIH++ENGSVE+YSRNAE
Sbjct: 353 FTPGVPVGPMLSKATKSVSEILNKFQGVEFTCEYKYDGERAQIHFLENGSVEIYSRNAER 412
Query: 456 NTGKFPDVVAAVSRLKKTSVSSFVLDCEVVAYDRAKQRILPFQVLSTRARKNVAVSDIKV 515
NTGK+PDV+AAVSRLKKT+VSSF+LDCE+VAYD KQ ILPFQVLSTR+RKNVA SDIKV
Sbjct: 413 NTGKYPDVIAAVSRLKKTTVSSFILDCELVAYDHGKQTILPFQVLSTRSRKNVAKSDIKV 472
Query: 516 DVCIFAFDLLYLNGQILLQENLKTRREHLYASFEEESGYFQFATAITSNDVEEIQKFLDK 575
VC+FAFDLL+LNG L QENLK RREHLY SFEEESG+ QFAT+ TSNDVEEIQ+F DK
Sbjct: 473 AVCVFAFDLLHLNGHKLFQENLKIRREHLYTSFEEESGFLQFATSTTSNDVEEIQEFFDK 532
Query: 576 AIGASSEGLIIKTLNEDATYEPSKRSLNWLKLKKDYMDNIGDSLDLVPIAAFHGRGKRTG 635
AI AS EGLI+KTL+EDATYEPSKRS NWLKLKKDY DN+GDSLDLVPI AFHGRGKRTG
Sbjct: 533 AIEASCEGLIVKTLHEDATYEPSKRSNNWLKLKKDYTDNLGDSLDLVPIGAFHGRGKRTG 592
Query: 636 VYGAFLLACYDNSNEEFQSICKIGTGFSEDVLIERSKGLQTKVIPKPKAYYRYAETINPD 695
VYGAFL+ACYDN EFQSI ++ TGF E L ERS L++KVIPKPKAYY E+INPD
Sbjct: 593 VYGAFLVACYDNERNEFQSIVRLATGFKEQELKERSTILRSKVIPKPKAYYSCGESINPD 652
Query: 696 VWFEASEVWEVKAADLTISPVYRAAVGIVDSNKGISLRFPRLLRVRPDKDPEQATSSEQV 755
VW EASEVWEVKAADLTISPVYRAA G VDS KGISLRFPR +RVRPDK PEQ++SSEQ+
Sbjct: 653 VWLEASEVWEVKAADLTISPVYRAAEGKVDSVKGISLRFPRFIRVRPDKTPEQSSSSEQI 712
Query: 756 AEMYNAQK 763
AEMYNAQK
Sbjct: 713 AEMYNAQK 720
>Medtr8g468400.1 | DNA ligase I, ATP-dependent protein | HC |
chr8:24777313-24770189 | 20130731
Length = 713
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/635 (70%), Positives = 529/635 (83%), Gaps = 3/635 (0%)
Query: 130 IAELKELAPRLKKKPSEFDPSTVVCWEKGKPVPFLFLCLAFDMIDKESGRIVITDIACNL 189
+ E+K+ LKK PSEFD S+V W+KG+PVPFLFL LAFDMI +E GR ++DI CN+
Sbjct: 72 VVEVKKRISLLKKTPSEFDHSSVAWWKKGEPVPFLFLSLAFDMIKEEKGRNAMSDIGCNV 131
Query: 190 LRTVIHATPEDLVPVVYFLANRIAPAHEGLELGIGDASIIKALAESCGRTESQIRKLNKD 249
LRTV+H TP DL+PVVY +NRIAP ++GLE+G+G A++IK LAE+CGRTE +++ K
Sbjct: 132 LRTVMHTTPGDLLPVVYLFSNRIAPPYQGLEMGVGKAAVIKTLAEACGRTEKDVKEHYKK 191
Query: 250 RGDLGLVAKECRSSQSMMRKPDALTIRKVFTIFRLIAKESGKDSQEKKKNHIKSLLVAAT 309
GDLGLVA+ SQ++ +K DALTI KVF F LIAKESGKDSQ+KK N IKSLL A+T
Sbjct: 192 LGDLGLVAQASHLSQTL-QKSDALTITKVFNTFHLIAKESGKDSQKKKNNLIKSLLHAST 250
Query: 310 DCEPIYLIRLLQTKLRIGLAEQTLLASLGQAAVYTEEHSKPPPEIQSPLEEAAKIVKQVY 369
DCEP+YL+RLL +LRIG AEQTLL++LGQAAVYTEEHSKPPP IQSPLEEA KIVKQ Y
Sbjct: 251 DCEPLYLVRLLLKELRIGYAEQTLLSALGQAAVYTEEHSKPPPGIQSPLEEATKIVKQAY 310
Query: 370 SVLPDYDKVLSSLLKDGVWKLPKTCKFTLGVPVGPMLSKPTKGVSEILNKFQDVEFTCEY 429
SVLPDYDK++S++L DGVW L KTC FT G+PV PMLS+ VSE LNK ++ E CEY
Sbjct: 311 SVLPDYDKIISAMLTDGVWLLAKTCNFTPGIPVEPMLSEKITSVSEALNKLRNAELICEY 370
Query: 430 KYDGERAQIHYMENGSVEVYSRNAEWNTGKFPDVVAAVSRLKKTSVSSFVLDCEVVAYDR 489
KYDGERAQIHY ENGSVE+YSR++E NTGKFPDVVAAVSRLKK +VSSFVLDCE+VAYDR
Sbjct: 371 KYDGERAQIHYKENGSVEIYSRSSERNTGKFPDVVAAVSRLKKKNVSSFVLDCEIVAYDR 430
Query: 490 AKQRILPFQVLSTRARKNVAVSDIKVDVCIFAFDLLYLNGQILLQENLKTRREHLYASFE 549
KQRILP QVLSTRARK+VAVS+IKVDVC+F FDLL+LNGQ LL+ENLK RR+HLYASFE
Sbjct: 431 KKQRILPMQVLSTRARKDVAVSNIKVDVCVFPFDLLHLNGQALLEENLKIRRKHLYASFE 490
Query: 550 EESGYFQFATAITSNDVEEIQKFLDKAIGASSEGLIIKTLNEDATYEPSKRSLNWLKLKK 609
EESG+ QF+ ++ SND +EIQKFLDK++ AS EGLI KTL++D+TY+PS+R NWLKLKK
Sbjct: 491 EESGFLQFSMSLISNDAKEIQKFLDKSVDASCEGLIFKTLDKDSTYQPSER--NWLKLKK 548
Query: 610 DYMDNIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDNSNEEFQSICKIGTGFSEDVLIE 669
DYM IGD+LDLVPI AFHG+GKR GVYG+FLLACYD +EFQ+I K GTGF ++ L E
Sbjct: 549 DYMKTIGDTLDLVPIGAFHGQGKRAGVYGSFLLACYDVDTQEFQTISKTGTGFKDEDLEE 608
Query: 670 RSKGLQTKVIPKPKAYYRYAETINPDVWFEASEVWEVKAADLTISPVYRAAVGIVDSNKG 729
S L+T +IPKPKA Y++AE PDVWFEASEVWEVK +DLTISP Y+AAVG V SNKG
Sbjct: 609 SSARLRTNLIPKPKACYKHAEKDKPDVWFEASEVWEVKVSDLTISPDYQAAVGKVHSNKG 668
Query: 730 ISLRFPRLLRVRPDKDPEQATSSEQVAEMYNAQKH 764
ISLR PRL+R RPDK PEQATSSE++AEMYNAQKH
Sbjct: 669 ISLRMPRLVRFRPDKAPEQATSSERIAEMYNAQKH 703
>Medtr7g082860.1 | ATP-dependent DNA ligase | HC |
chr7:31777246-31792644 | 20130731
Length = 1409
Score = 496 bits (1278), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/644 (38%), Positives = 401/644 (62%), Gaps = 30/644 (4%)
Query: 144 PSE-FDPSTVVCWEKGKPVPFLFLCLAFDMIDKESGRIVITDIACNLLRTVIHATPEDLV 202
PS+ ++P CW G+P P+L L F +++ E G+I T I CN+ R+++ +PED++
Sbjct: 761 PSDKYNPKEHACWRDGQPAPYLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVL 820
Query: 203 PVVYFLANRIAPAHEGLELGIGDASIIKALAESCGRTESQIRKLNKDRGDLGLVAKECRS 262
P VY N+IA HE +EL IG + + AL E+CG +I+++ GDLG VA+ECR
Sbjct: 821 PAVYLCTNKIAADHENVELNIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQ 880
Query: 263 SQSMMRKPDALTIRKVFTIFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPIYLIRLLQT 322
+Q ++ P L I+ +++ R I+ ++G S +KK I L+ + + E +L+R L
Sbjct: 881 TQRLLAPPTPLLIKDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVR 940
Query: 323 KLRIGLAEQTLLASLGQAAVYTEEHSKP-------PPEIQSPLEEAAKIVKQVYSVLPDY 375
LRIG +T+L +L A V +S+P +++ L+ + V + Y++LP+
Sbjct: 941 NLRIGAMLRTVLPALAHAVVM---NSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNL 997
Query: 376 DKVLSSLLKDGVWKLPKTCKFTLGVPVGPMLSKPTKGVSEILNKFQDVEFTCEYKYDGER 435
D ++ +L+ G+ + G+P+ PML+K T G+ + L FQ+ FTCEYKYDG+R
Sbjct: 998 DIIVPTLMNKGIEFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQR 1057
Query: 436 AQIHYMENGSVEVYSRNAEWNTGKFPDVVAAVSRLKKTSVSSFVLDCEVVAYDRAKQ-RI 494
AQIH + +GSV V+SRN + +T +FPD+V + K S+F++D EVV DR RI
Sbjct: 1058 AQIHKLVDGSVLVFSRNGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRI 1117
Query: 495 LPFQVLSTRARKN----VAVSDIKVDVCIFAFDLLYLNGQILLQENLKTRREHLYASF-E 549
+ FQ LS+R R V IKV +CIF FD+++ NG+ LL L+ RR++L A F +
Sbjct: 1118 MSFQELSSRGRGGKDTLVTKESIKVGICIFVFDIMFANGEQLLGFPLRLRRKYLKALFYD 1177
Query: 550 EESGYFQFA--TAITSND--------VEEIQKFLDKAIGASSEGLIIKTLNEDATYEPSK 599
E GYF++A T+I ++D + I FL+ A+ +S EG+++KTL+ DA Y PSK
Sbjct: 1178 ERPGYFEYAKETSIEADDACLTCEATLTRINAFLEDALHSSCEGIMVKTLDIDAGYSPSK 1237
Query: 600 RSLNWLKLKKDYMDNIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDNSNEEFQSICKIG 659
RS WLK+K+DY++ + D+LDLVPI A+HG G++ G Y FL+AC++ EE+QS+C++
Sbjct: 1238 RSDKWLKVKRDYVEGLNDTLDLVPIGAWHGNGRKAGWYSPFLMACFNPETEEYQSVCRVM 1297
Query: 660 TGFSEDVLIERSKGL-QTKVIPKPKAYYRYAETINPDVWFEASEVWEVKAADLTISPVYR 718
+GF++ IE + L + K++ K YY+ ET PD+WF VWE++ AD T+SPV+
Sbjct: 1298 SGFTDSFYIEMKEFLSEDKLLSKKPPYYQTGET--PDMWFCPQLVWEIRGADFTVSPVHH 1355
Query: 719 AAVGIVDSNKGISLRFPRLLRVRPDKDPEQATSSEQVAEMYNAQ 762
AA+G+V ++GIS+RFPR + D++P++ +++ + EM+++Q
Sbjct: 1356 AAIGLVHPSRGISIRFPRFICRVSDRNPDECSTAADIVEMFHSQ 1399
>Medtr7g082860.2 | ATP-dependent DNA ligase | HC |
chr7:31777246-31792639 | 20130731
Length = 1396
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/647 (36%), Positives = 387/647 (59%), Gaps = 49/647 (7%)
Query: 144 PSE-FDPSTVVCWEKGKPVPFLFLCLAFDMIDKESGRIVITDIACNLLRTVIHATPEDLV 202
PS+ ++P CW G+P P+L L F +++ E G+I T I CN+ R+++ +PED++
Sbjct: 761 PSDKYNPKEHACWRDGQPAPYLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVL 820
Query: 203 PVVYFLANRIAPAHEGLELGIGDASIIKALAESCGRTESQIRKLNKDRGDLGLVAKECRS 262
P VY N+IA HE +EL IG + + AL E+CG +I+++ GDLG VA+ECR
Sbjct: 821 PAVYLCTNKIAADHENVELNIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQ 880
Query: 263 SQSMMRKPDALTIRKVFTIFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPIYLIRLLQT 322
+Q ++ P L I+ +++ R I+ ++G S +KK I L+ + + E +L+R L
Sbjct: 881 TQRLLAPPTPLLIKDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVR 940
Query: 323 KLRIGLAEQTLLASLGQAAVYTEEHSKP-------PPEIQSPLEEAAKIVKQVYSVLPDY 375
LRIG +T+L +L A V +S+P +++ L+ + V + Y++LP+
Sbjct: 941 NLRIGAMLRTVLPALAHAVVM---NSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNL 997
Query: 376 DKVLSSLLKDGVWKLPKTCKFTLGVPVGPMLSKPTKGVSEILNKFQDVEFTCEYKYDGER 435
D ++ +L+ G+ + G+P+ PML+K T G+ + L FQ+ FTCEYKYDG+R
Sbjct: 998 DIIVPTLMNKGIEFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQR 1057
Query: 436 AQIHYMENGSVEVYSRNAEWNTGKFPDVVAAVSRLKKTSVSSFVLDCEVVAYDRAKQ-RI 494
AQIH + +GSV V+SRN + +T +FPD+V + K S+F++D EVV DR RI
Sbjct: 1058 AQIHKLVDGSVLVFSRNGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRI 1117
Query: 495 LPFQVLSTRAR--KNVAVSDIKVDVCIFAFDLLYLNGQILLQENLKTRREHLYAS----- 547
+ FQ LS+R R K+ V+ + V F + +YAS
Sbjct: 1118 MSFQELSSRGRGGKDTLVTKESIKVTGFP----------------SPPKTKVYASDLKAL 1161
Query: 548 -FEEESGYFQFA--TAITSND--------VEEIQKFLDKAIGASSEGLIIKTLNEDATYE 596
++E GYF++A T+I ++D + I FL+ A+ +S EG+++KTL+ DA Y
Sbjct: 1162 FYDERPGYFEYAKETSIEADDACLTCEATLTRINAFLEDALHSSCEGIMVKTLDIDAGYS 1221
Query: 597 PSKRSLNWLKLKKDYMDNIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDNSNEEFQSIC 656
PSKRS WLK+K+DY++ + D+LDLVPI A+HG G++ G Y FL+AC++ EE+QS+C
Sbjct: 1222 PSKRSDKWLKVKRDYVEGLNDTLDLVPIGAWHGNGRKAGWYSPFLMACFNPETEEYQSVC 1281
Query: 657 KIGTGFSEDVLIERSKGL-QTKVIPKPKAYYRYAETINPDVWFEASEVWEVKAADLTISP 715
++ +GF++ IE + L + K++ K YY+ ET PD+WF VWE++ AD T+SP
Sbjct: 1282 RVMSGFTDSFYIEMKEFLSEDKLLSKKPPYYQTGET--PDMWFCPQLVWEIRGADFTVSP 1339
Query: 716 VYRAAVGIVDSNKGISLRFPRLLRVRPDKDPEQATSSEQVAEMYNAQ 762
V+ AA+G+V ++GIS+RFPR + D++P++ +++ + EM+++Q
Sbjct: 1340 VHHAAIGLVHPSRGISIRFPRFICRVSDRNPDECSTAADIVEMFHSQ 1386
>Medtr7g082860.3 | ATP-dependent DNA ligase | HC |
chr7:31777246-31792639 | 20130731
Length = 1348
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/550 (39%), Positives = 338/550 (61%), Gaps = 27/550 (4%)
Query: 144 PSE-FDPSTVVCWEKGKPVPFLFLCLAFDMIDKESGRIVITDIACNLLRTVIHATPEDLV 202
PS+ ++P CW G+P P+L L F +++ E G+I T I CN+ R+++ +PED++
Sbjct: 761 PSDKYNPKEHACWRDGQPAPYLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVL 820
Query: 203 PVVYFLANRIAPAHEGLELGIGDASIIKALAESCGRTESQIRKLNKDRGDLGLVAKECRS 262
P VY N+IA HE +EL IG + + AL E+CG +I+++ GDLG VA+ECR
Sbjct: 821 PAVYLCTNKIAADHENVELNIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQ 880
Query: 263 SQSMMRKPDALTIRKVFTIFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPIYLIRLLQT 322
+Q ++ P L I+ +++ R I+ ++G S +KK I L+ + + E +L+R L
Sbjct: 881 TQRLLAPPTPLLIKDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVR 940
Query: 323 KLRIGLAEQTLLASLGQAAVYTEEHSKP-------PPEIQSPLEEAAKIVKQVYSVLPDY 375
LRIG +T+L +L A V +S+P +++ L+ + V + Y++LP+
Sbjct: 941 NLRIGAMLRTVLPALAHAVVM---NSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNL 997
Query: 376 DKVLSSLLKDGVWKLPKTCKFTLGVPVGPMLSKPTKGVSEILNKFQDVEFTCEYKYDGER 435
D ++ +L+ G+ + G+P+ PML+K T G+ + L FQ+ FTCEYKYDG+R
Sbjct: 998 DIIVPTLMNKGIEFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQR 1057
Query: 436 AQIHYMENGSVEVYSRNAEWNTGKFPDVVAAVSRLKKTSVSSFVLDCEVVAYDRAKQ-RI 494
AQIH + +GSV V+SRN + +T +FPD+V + K S+F++D EVV DR RI
Sbjct: 1058 AQIHKLVDGSVLVFSRNGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRI 1117
Query: 495 LPFQVLSTRARKN----VAVSDIKVDVCIFAFDLLYLNGQILLQENLKTRREHLYASF-E 549
+ FQ LS+R R V IKV +CIF FD+++ NG+ LL L+ RR++L A F +
Sbjct: 1118 MSFQELSSRGRGGKDTLVTKESIKVGICIFVFDIMFANGEQLLGFPLRLRRKYLKALFYD 1177
Query: 550 EESGYFQFA--TAITSND--------VEEIQKFLDKAIGASSEGLIIKTLNEDATYEPSK 599
E GYF++A T+I ++D + I FL+ A+ +S EG+++KTL+ DA Y PSK
Sbjct: 1178 ERPGYFEYAKETSIEADDACLTCEATLTRINAFLEDALHSSCEGIMVKTLDIDAGYSPSK 1237
Query: 600 RSLNWLKLKKDYMDNIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDNSNEEFQSICKIG 659
RS WLK+K+DY++ + D+LDLVPI A+HG G++ G Y FL+AC++ EE+QS+C++
Sbjct: 1238 RSDKWLKVKRDYVEGLNDTLDLVPIGAWHGNGRKAGWYSPFLMACFNPETEEYQSVCRVM 1297
Query: 660 TGFSEDVLIE 669
+GF++ IE
Sbjct: 1298 SGFTDSFYIE 1307
>Medtr7g082860.4 | ATP-dependent DNA ligase | HC |
chr7:31777246-31792673 | 20130731
Length = 1274
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/516 (38%), Positives = 314/516 (60%), Gaps = 27/516 (5%)
Query: 144 PSE-FDPSTVVCWEKGKPVPFLFLCLAFDMIDKESGRIVITDIACNLLRTVIHATPEDLV 202
PS+ ++P CW G+P P+L L F +++ E G+I T I CN+ R+++ +PED++
Sbjct: 761 PSDKYNPKEHACWRDGQPAPYLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVL 820
Query: 203 PVVYFLANRIAPAHEGLELGIGDASIIKALAESCGRTESQIRKLNKDRGDLGLVAKECRS 262
P VY N+IA HE +EL IG + + AL E+CG +I+++ GDLG VA+ECR
Sbjct: 821 PAVYLCTNKIAADHENVELNIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQ 880
Query: 263 SQSMMRKPDALTIRKVFTIFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPIYLIRLLQT 322
+Q ++ P L I+ +++ R I+ ++G S +KK I L+ + + E +L+R L
Sbjct: 881 TQRLLAPPTPLLIKDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVR 940
Query: 323 KLRIGLAEQTLLASLGQAAVYTEEHSKP-------PPEIQSPLEEAAKIVKQVYSVLPDY 375
LRIG +T+L +L A V +S+P +++ L+ + V + Y++LP+
Sbjct: 941 NLRIGAMLRTVLPALAHAVVM---NSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNL 997
Query: 376 DKVLSSLLKDGVWKLPKTCKFTLGVPVGPMLSKPTKGVSEILNKFQDVEFTCEYKYDGER 435
D ++ +L+ G+ + G+P+ PML+K T G+ + L FQ+ FTCEYKYDG+R
Sbjct: 998 DIIVPTLMNKGIEFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQR 1057
Query: 436 AQIHYMENGSVEVYSRNAEWNTGKFPDVVAAVSRLKKTSVSSFVLDCEVVAYDRAKQ-RI 494
AQIH + +GSV V+SRN + +T +FPD+V + K S+F++D EVV DR RI
Sbjct: 1058 AQIHKLVDGSVLVFSRNGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRI 1117
Query: 495 LPFQVLSTRARKN----VAVSDIKVDVCIFAFDLLYLNGQILLQENLKTRREHLYASF-E 549
+ FQ LS+R R V IKV +CIF FD+++ NG+ LL L+ RR++L A F +
Sbjct: 1118 MSFQELSSRGRGGKDTLVTKESIKVGICIFVFDIMFANGEQLLGFPLRLRRKYLKALFYD 1177
Query: 550 EESGYFQFA--TAITSND--------VEEIQKFLDKAIGASSEGLIIKTLNEDATYEPSK 599
E GYF++A T+I ++D + I FL+ A+ +S EG+++KTL+ DA Y PSK
Sbjct: 1178 ERPGYFEYAKETSIEADDACLTCEATLTRINAFLEDALHSSCEGIMVKTLDIDAGYSPSK 1237
Query: 600 RSLNWLKLKKDYMDNIGDSLDLVPIAAFHGRGKRTG 635
RS WLK+K+DY++ + D+LDLVPI A+HG G++ G
Sbjct: 1238 RSDKWLKVKRDYVEGLNDTLDLVPIGAWHGNGRKAG 1273
>Medtr7g082860.5 | ATP-dependent DNA ligase | HC |
chr7:31777246-31789508 | 20130731
Length = 1158
Score = 289 bits (739), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 149/400 (37%), Positives = 236/400 (59%), Gaps = 16/400 (4%)
Query: 144 PSE-FDPSTVVCWEKGKPVPFLFLCLAFDMIDKESGRIVITDIACNLLRTVIHATPEDLV 202
PS+ ++P CW G+P P+L L F +++ E G+I T I CN+ R+++ +PED++
Sbjct: 761 PSDKYNPKEHACWRDGQPAPYLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVL 820
Query: 203 PVVYFLANRIAPAHEGLELGIGDASIIKALAESCGRTESQIRKLNKDRGDLGLVAKECRS 262
P VY N+IA HE +EL IG + + AL E+CG +I+++ GDLG VA+ECR
Sbjct: 821 PAVYLCTNKIAADHENVELNIGGSLVTTALEEACGTNRLKIKEMYNKLGDLGDVAQECRQ 880
Query: 263 SQSMMRKPDALTIRKVFTIFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPIYLIRLLQT 322
+Q ++ P L I+ +++ R I+ ++G S +KK I L+ + + E +L+R L
Sbjct: 881 TQRLLAPPTPLLIKDIYSALRKISVQTGNGSTLRKKGIILHLMRSCREKEMKFLVRTLVR 940
Query: 323 KLRIGLAEQTLLASLGQAAVYTEEHSKP-------PPEIQSPLEEAAKIVKQVYSVLPDY 375
LRIG +T+L +L A V +S+P +++ L+ + V + Y++LP+
Sbjct: 941 NLRIGAMLRTVLPALAHAVVM---NSRPTVYEEGTAENLKAALQVLSVAVVEAYNILPNL 997
Query: 376 DKVLSSLLKDGVWKLPKTCKFTLGVPVGPMLSKPTKGVSEILNKFQDVEFTCEYKYDGER 435
D ++ +L+ G+ + G+P+ PML+K T G+ + L FQ+ FTCEYKYDG+R
Sbjct: 998 DIIVPTLMNKGIEFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQR 1057
Query: 436 AQIHYMENGSVEVYSRNAEWNTGKFPDVVAAVSRLKKTSVSSFVLDCEVVAYDRAKQ-RI 494
AQIH + +GSV V+SRN + +T +FPD+V + K S+F++D EVV DR RI
Sbjct: 1058 AQIHKLVDGSVLVFSRNGDESTSRFPDLVDMIKESCKPVASTFIIDAEVVGIDRKNGCRI 1117
Query: 495 LPFQVLSTRARKN----VAVSDIKVDVCIFAFDLLYLNGQ 530
+ FQ LS+R R V IKV +CIF FD+++ NG+
Sbjct: 1118 MSFQELSSRGRGGKDTLVTKESIKVGICIFVFDIMFANGE 1157
>Medtr2g038030.1 | DNA ligase | HC | chr2:16517930-16532770 |
20130731
Length = 883
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 139/560 (24%), Positives = 247/560 (44%), Gaps = 106/560 (18%)
Query: 245 KLNKDRGDLGLVAKECRSSQSMMRKPDA---LTIRKVFTIFRLIAKESGKDSQEKKKNHI 301
K + G+ LVA E +R+ A LTI+++ L+ + S +++ +K +
Sbjct: 97 KTGANAGNFALVAAEVL----QLRQGTASGGLTIKELND---LLDQLSSSENRGEKTLVL 149
Query: 302 KSLLVAATDCEPIYLIRLLQTKLRIGLAEQTLLASLGQAAVYTEEHSKPPPEIQSPLEEA 361
+L+ E ++I ++ L++G++E++ ++ E H P E
Sbjct: 150 STLIQKTNALEMKWIIMIILKDLKLGISERS---------IFHEFH--PDAE-------- 190
Query: 362 AKIVKQVYSVLPDYDKVLSSLLKDGVWKLPKTCKFTLGVPVGPMLSKPTKGVSEILNKFQ 421
+++V D K++ L+D + K +G V P L+K ++ K
Sbjct: 191 -----DLFNVTCDL-KLVCEKLRDRNQR-HKRQDIEVGKAVRPQLAKRVANAADAWKKLH 243
Query: 422 DVEFTCEYKYDGERAQIHYMENGS-VEVYSRN----AEWNTGKFPDVVAAVSRLKKTSVS 476
E E K+DG+R QIH +NG+ + +SRN +E+ G ++ + V
Sbjct: 244 GKEVVAECKFDGDRIQIH--KNGTEIHFFSRNFIDHSEYAHGMSEIIIQNI------LVD 295
Query: 477 SFVLDCEVVAYDRAKQRILPF---QVLSTRARKNVAVSDIKVDVCIFAFDLLYLNGQILL 533
+LD E++ +D + R F Q ++ AR + + +C AFD+LY ++
Sbjct: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL---ESNRQLCYVAFDILYFGDTSVI 352
Query: 534 QENLKTRREHLYASFEEESGYFQF----------------ATAITSNDVEEIQKFLDKAI 577
+ LK R E L + G F+ + +++ EE+++F + I
Sbjct: 353 HQTLKERHEILRKVVKPLKGRFEILLPNGGINNHRSSGEPCWSFIAHNAEEVERFFKETI 412
Query: 578 GASSEGLIIKTLNEDATYEPSKRSLNWLKLKKDYMDNIGDSLDLVPIAAFHGRGKRTGVY 637
EG+++K L+ + +EPS RS WLKLK DY+ + G LD++ I ++G G+ G
Sbjct: 413 ENREEGIVVKDLS--SKWEPSDRSGKWLKLKPDYV-HAGSDLDVLIIGGYYGSGRHGGEV 469
Query: 638 GAFLLACYDNSN-----EEFQSICKIGTGFSEDVLIERSKGLQTKVIPKPKAYYR----- 687
FL+ + + + F S+C++GTG S+D L V+ K K Y+R
Sbjct: 470 AQFLVGLAERPSPNTHPKRFISLCRVGTGLSDDEL--------EAVVTKLKPYFRKYPKT 521
Query: 688 ----YAETIN-----PDVWFEASEVWEVKAADLTISPVYRAAVGIVDSNKGISLRFPRLL 738
+ + N PDVW ++ E + + I + A SLRFPR+
Sbjct: 522 SPPSFYQVTNHSKERPDVWVDSPEKSIILSVTSDIRTIESEAFA-----APYSLRFPRID 576
Query: 739 RVRPDKDPEQATSSEQVAEM 758
RVR DKD + + E+
Sbjct: 577 RVRYDKDWHECLDVQSFIEL 596
>Medtr2g038030.2 | DNA ligase | HC | chr2:16517930-16532770 |
20130731
Length = 814
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 139/560 (24%), Positives = 247/560 (44%), Gaps = 106/560 (18%)
Query: 245 KLNKDRGDLGLVAKECRSSQSMMRKPDA---LTIRKVFTIFRLIAKESGKDSQEKKKNHI 301
K + G+ LVA E +R+ A LTI+++ L+ + S +++ +K +
Sbjct: 97 KTGANAGNFALVAAEVL----QLRQGTASGGLTIKELND---LLDQLSSSENRGEKTLVL 149
Query: 302 KSLLVAATDCEPIYLIRLLQTKLRIGLAEQTLLASLGQAAVYTEEHSKPPPEIQSPLEEA 361
+L+ E ++I ++ L++G++E++ ++ E H P E
Sbjct: 150 STLIQKTNALEMKWIIMIILKDLKLGISERS---------IFHEFH--PDAE-------- 190
Query: 362 AKIVKQVYSVLPDYDKVLSSLLKDGVWKLPKTCKFTLGVPVGPMLSKPTKGVSEILNKFQ 421
+++V D K++ L+D + K +G V P L+K ++ K
Sbjct: 191 -----DLFNVTCDL-KLVCEKLRDRNQR-HKRQDIEVGKAVRPQLAKRVANAADAWKKLH 243
Query: 422 DVEFTCEYKYDGERAQIHYMENGS-VEVYSRN----AEWNTGKFPDVVAAVSRLKKTSVS 476
E E K+DG+R QIH +NG+ + +SRN +E+ G ++ + V
Sbjct: 244 GKEVVAECKFDGDRIQIH--KNGTEIHFFSRNFIDHSEYAHGMSEIIIQNI------LVD 295
Query: 477 SFVLDCEVVAYDRAKQRILPF---QVLSTRARKNVAVSDIKVDVCIFAFDLLYLNGQILL 533
+LD E++ +D + R F Q ++ AR + + +C AFD+LY ++
Sbjct: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL---ESNRQLCYVAFDILYFGDTSVI 352
Query: 534 QENLKTRREHLYASFEEESGYFQF----------------ATAITSNDVEEIQKFLDKAI 577
+ LK R E L + G F+ + +++ EE+++F + I
Sbjct: 353 HQTLKERHEILRKVVKPLKGRFEILLPNGGINNHRSSGEPCWSFIAHNAEEVERFFKETI 412
Query: 578 GASSEGLIIKTLNEDATYEPSKRSLNWLKLKKDYMDNIGDSLDLVPIAAFHGRGKRTGVY 637
EG+++K L+ + +EPS RS WLKLK DY+ + G LD++ I ++G G+ G
Sbjct: 413 ENREEGIVVKDLS--SKWEPSDRSGKWLKLKPDYV-HAGSDLDVLIIGGYYGSGRHGGEV 469
Query: 638 GAFLLACYDNSN-----EEFQSICKIGTGFSEDVLIERSKGLQTKVIPKPKAYYR----- 687
FL+ + + + F S+C++GTG S+D L V+ K K Y+R
Sbjct: 470 AQFLVGLAERPSPNTHPKRFISLCRVGTGLSDDEL--------EAVVTKLKPYFRKYPKT 521
Query: 688 ----YAETIN-----PDVWFEASEVWEVKAADLTISPVYRAAVGIVDSNKGISLRFPRLL 738
+ + N PDVW ++ E + + I + A SLRFPR+
Sbjct: 522 SPPSFYQVTNHSKERPDVWVDSPEKSIILSVTSDIRTIESEAFA-----APYSLRFPRID 576
Query: 739 RVRPDKDPEQATSSEQVAEM 758
RVR DKD + + E+
Sbjct: 577 RVRYDKDWHECLDVQSFIEL 596