Miyakogusa Predicted Gene

Lj3g3v3033230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3033230.1 Non Characterized Hit- tr|D2DW84|D2DW84_PHAVU
Putative F-box family protein OS=Phaseolus vulgaris
PE,59.09,0.00002,F-box domain,F-box domain, cyclin-like; no
description,NULL; FBOX,F-box domain, cyclin-like; seg,NUL,CUFF.45177.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g022390.1 | F-box/RNI/FBD-like domain protein | LC | chr6:...    52   2e-07
Medtr3g114200.1 | F-box/RNI/FBD-like domain protein | LC | chr3:...    50   3e-07
Medtr3g113782.1 | F-box/RNI/FBD-like domain protein | LC | chr3:...    50   5e-07
Medtr5g045170.1 | F-box/RNI/FBD-like domain protein | LC | chr5:...    49   8e-07
Medtr4g081030.1 | F-box/RNI/FBD-like domain protein | LC | chr4:...    49   1e-06
Medtr1g085120.3 | F-box/RNI/FBD-like domain protein | HC | chr1:...    49   2e-06
Medtr1g085120.2 | F-box/RNI/FBD-like domain protein | HC | chr1:...    48   2e-06
Medtr6g011460.1 | F-box/RNI/FBD-like domain protein | LC | chr6:...    48   2e-06
Medtr5g058000.1 | F-box/RNI/FBD-like domain protein, putative | ...    48   2e-06
Medtr1g085120.1 | F-box/RNI/FBD-like domain protein | HC | chr1:...    48   2e-06
Medtr3g107160.1 | F-box/RNI/FBD-like domain protein | LC | chr3:...    48   2e-06
Medtr2g005990.1 | F-box/RNI/FBD-like domain protein | LC | chr2:...    48   2e-06
Medtr5g058100.1 | F-box/RNI/FBD-like domain protein | LC | chr5:...    48   2e-06
Medtr3g107100.2 | F-box/RNI/FBD-like domain protein | HC | chr3:...    48   2e-06
Medtr3g107100.1 | F-box/RNI/FBD-like domain protein | HC | chr3:...    48   2e-06
Medtr5g061680.1 | F-box/RNI superfamily protein | LC | chr5:2561...    48   2e-06
Medtr7g007370.1 | F-box/RNI/FBD-like domain protein | HC | chr7:...    48   3e-06
Medtr3g099830.1 | F-box/RNI/FBD-like domain protein | HC | chr3:...    47   4e-06
Medtr3g099830.2 | F-box/RNI/FBD-like domain protein | HC | chr3:...    47   4e-06
Medtr7g033990.1 | cyclin-like F-box protein | LC | chr7:12539804...    47   4e-06
Medtr7g055943.1 | F-box/RNI/FBD-like domain protein | LC | chr7:...    47   5e-06
Medtr7g033940.1 | F-box/RNI superfamily protein, putative | LC |...    47   5e-06
Medtr5g039490.1 | F-box/RNI/FBD-like domain protein | LC | chr5:...    46   7e-06
Medtr3g082890.1 | cyclin-like F-box protein | HC | chr3:37415980...    46   8e-06
Medtr3g082890.2 | cyclin-like F-box protein | HC | chr3:37418045...    46   1e-05

>Medtr6g022390.1 | F-box/RNI/FBD-like domain protein | LC |
          chr6:7813976-7814431 | 20130731
          Length = 151

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSVXXXXXXXXXXXKAMITRTRRSKPDS 61
          LPDE+  HILS LPTK A +T+VLS+RW+ LC S+             +   +++   D+
Sbjct: 10 LPDELLSHILSFLPTKLAFSTTVLSKRWTGLCYSLPALHFEFRLKNCGL---SKQQVEDT 66

Query: 62 FLDFANHVSSTILAR 76
          F  F++ V + IL+ 
Sbjct: 67 FYRFSHFVDTLILSH 81


>Medtr3g114200.1 | F-box/RNI/FBD-like domain protein | LC |
          chr3:53341194-53340715 | 20130731
          Length = 159

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 26/35 (74%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
          LPD I  HILS LPTK  +ATS+LS+RW  LC SV
Sbjct: 24 LPDSIICHILSFLPTKDTVATSILSKRWKPLCISV 58


>Medtr3g113782.1 | F-box/RNI/FBD-like domain protein | LC |
          chr3:53067876-53068349 | 20130731
          Length = 88

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 3/70 (4%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSVXXXXXXXXXXXKAMITRTRRSKPDS 61
          LPD I YHILS LPTK  +ATS+LS+RW  L  SV               T  R + P  
Sbjct: 22 LPDSIIYHILSFLPTKDTVATSILSKRWKPLWLSVFTLNFTDHIIFTKTTTICRNTFP-- 79

Query: 62 FLDFANHVSS 71
            DFA ++ S
Sbjct: 80 -ADFAKNLGS 88


>Medtr5g045170.1 | F-box/RNI/FBD-like domain protein | LC |
          chr5:19805236-19807353 | 20130731
          Length = 398

 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 25/35 (71%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
           PDEI  HILS LP KQA  TSVLS+RW  LC S+
Sbjct: 19 FPDEILTHILSFLPFKQAFKTSVLSKRWRPLCYSL 53


>Medtr4g081030.1 | F-box/RNI/FBD-like domain protein | LC |
          chr4:31278741-31277464 | 20130731
          Length = 388

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRW 29
          LPDEI +HILS+LP K A+ TS+L+RRW
Sbjct: 22 LPDEILHHILSLLPAKDAVGTSILARRW 49


>Medtr1g085120.3 | F-box/RNI/FBD-like domain protein | HC |
           chr1:37999928-37996797 | 20130731
          Length = 470

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 27/35 (77%)

Query: 2   LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
           LPDE+  +ILS LP K A  T+VLS+RW+LLC S+
Sbjct: 184 LPDELLCYILSFLPMKLAFTTTVLSKRWTLLCCSL 218


>Medtr1g085120.2 | F-box/RNI/FBD-like domain protein | HC |
           chr1:37999928-37996378 | 20130731
          Length = 548

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 27/35 (77%)

Query: 2   LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
           LPDE+  +ILS LP K A  T+VLS+RW+LLC S+
Sbjct: 172 LPDELLCYILSFLPMKLAFTTTVLSKRWTLLCCSL 206


>Medtr6g011460.1 | F-box/RNI/FBD-like domain protein | LC |
          chr6:3256434-3254758 | 20130731
          Length = 426

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 26/35 (74%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
          LPDE+  HIL  LPTK +  T+VLS+RWS LC S+
Sbjct: 51 LPDELLQHILCFLPTKLSFTTTVLSKRWSKLCCSL 85


>Medtr5g058000.1 | F-box/RNI/FBD-like domain protein, putative |
          LC | chr5:23941255-23939885 | 20130731
          Length = 377

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 27/35 (77%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
          LPDE+  HILS LPTK A  T++LS+RW+ LC S+
Sbjct: 13 LPDELLCHILSFLPTKLAFCTTLLSKRWAPLCYSL 47


>Medtr1g085120.1 | F-box/RNI/FBD-like domain protein | HC |
           chr1:37998507-37996378 | 20130731
          Length = 473

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 27/35 (77%)

Query: 2   LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
           LPDE+  +ILS LP K A  T+VLS+RW+LLC S+
Sbjct: 97  LPDELLCYILSFLPMKLAFTTTVLSKRWTLLCCSL 131


>Medtr3g107160.1 | F-box/RNI/FBD-like domain protein | LC |
          chr3:49427732-49426375 | 20130731
          Length = 389

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 28/35 (80%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
          LPD +  HI+S LPT+QA+ATSVLS+RW+ L  SV
Sbjct: 15 LPDRVICHIISFLPTEQAVATSVLSKRWTHLWLSV 49


>Medtr2g005990.1 | F-box/RNI/FBD-like domain protein | LC |
          chr2:409106-410691 | 20130731
          Length = 395

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 25/31 (80%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLL 32
          LPDEI  HILS +PTKQA  TS+LS+RW+ L
Sbjct: 11 LPDEILIHILSFVPTKQAFVTSILSKRWTHL 41


>Medtr5g058100.1 | F-box/RNI/FBD-like domain protein | LC |
          chr5:24006090-24004848 | 20130731
          Length = 386

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 27/35 (77%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
          LPDE+  HILS LPTK A  T++LS+RW+ LC S+
Sbjct: 14 LPDELLCHILSFLPTKLAFTTTLLSKRWAPLCYSL 48


>Medtr3g107100.2 | F-box/RNI/FBD-like domain protein | HC |
          chr3:49447193-49444342 | 20130731
          Length = 408

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 10/76 (13%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSVXXXXXXXXXXXKAMITRTRRSKPDS 61
          LP+ +  HILS LPTKQA+ATSVL++RW  L  SV               + T     ++
Sbjct: 16 LPETLICHILSFLPTKQAVATSVLAKRWIHLWCSVLAIN----------FSNTELYHQEA 65

Query: 62 FLDFANHVSSTILARN 77
             F+  V S +L+RN
Sbjct: 66 CFRFSESVYSVLLSRN 81


>Medtr3g107100.1 | F-box/RNI/FBD-like domain protein | HC |
          chr3:49447193-49443605 | 20130731
          Length = 408

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 10/76 (13%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSVXXXXXXXXXXXKAMITRTRRSKPDS 61
          LP+ +  HILS LPTKQA+ATSVL++RW  L  SV               + T     ++
Sbjct: 16 LPETLICHILSFLPTKQAVATSVLAKRWIHLWCSVLAIN----------FSNTELYHQEA 65

Query: 62 FLDFANHVSSTILARN 77
             F+  V S +L+RN
Sbjct: 66 CFRFSESVYSVLLSRN 81


>Medtr5g061680.1 | F-box/RNI superfamily protein | LC |
          chr5:25613253-25614498 | 20130731
          Length = 326

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 28/35 (80%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
          LPD+I  HILS+LPTK A  T+VLS++W+ LC S+
Sbjct: 16 LPDDILCHILSLLPTKFAFTTTVLSKQWTQLCGSL 50


>Medtr7g007370.1 | F-box/RNI/FBD-like domain protein | HC |
          chr7:1460198-1458708 | 20130731
          Length = 342

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 27/34 (79%), Gaps = 1/34 (2%)

Query: 1  MLPDEIFYHILSVLPTKQAIATSVLSRRW-SLLC 33
          +LPD+I  HILS LPTKQA  TSVLS+RW +L C
Sbjct: 21 ILPDDILVHILSPLPTKQAFVTSVLSKRWKNLWC 54


>Medtr3g099830.1 | F-box/RNI/FBD-like domain protein | HC |
          chr3:45811581-45808064 | 20130731
          Length = 374

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 23/28 (82%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRW 29
          LPDEI  HILS +PTKQA  TS+LS+RW
Sbjct: 17 LPDEILIHILSFVPTKQAFTTSILSKRW 44


>Medtr3g099830.2 | F-box/RNI/FBD-like domain protein | HC |
          chr3:45811559-45808858 | 20130731
          Length = 374

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 23/28 (82%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRW 29
          LPDEI  HILS +PTKQA  TS+LS+RW
Sbjct: 17 LPDEILIHILSFVPTKQAFTTSILSKRW 44


>Medtr7g033990.1 | cyclin-like F-box protein | LC |
          chr7:12539804-12541944 | 20130731
          Length = 419

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
          LPD +  HILS LPTKQ+ ATS+LS+RW+ L  SV
Sbjct: 16 LPDSVICHILSFLPTKQSAATSILSKRWNPLWHSV 50


>Medtr7g055943.1 | F-box/RNI/FBD-like domain protein | LC |
          chr7:19318006-19316445 | 20130731
          Length = 432

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 27/35 (77%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
          LPDE+  +ILS LPTK A  T++LS+RW+ LC S+
Sbjct: 45 LPDELLIYILSFLPTKLAFTTAILSKRWTQLCYSL 79


>Medtr7g033940.1 | F-box/RNI superfamily protein, putative | LC |
           chr7:12503074-12505175 | 20130731
          Length = 222

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 2   LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
           LPD +  HILS LPTKQ+ ATS+LS+RW+ L  SV
Sbjct: 99  LPDSVICHILSFLPTKQSAATSILSKRWNPLWHSV 133


>Medtr5g039490.1 | F-box/RNI/FBD-like domain protein | LC |
          chr5:17391513-17392853 | 20130731
          Length = 378

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 25/35 (71%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
           PDEI  HILS+LP K A  T+VLS+RW  LC S+
Sbjct: 25 FPDEILTHILSLLPCKDAFRTTVLSKRWVSLCHSL 59


>Medtr3g082890.1 | cyclin-like F-box protein | HC |
           chr3:37415980-37419770 | 20130731
          Length = 484

 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 26/35 (74%)

Query: 2   LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
           LPD I  HILS LPTK  +ATS+LS+RW+ L  SV
Sbjct: 102 LPDSIICHILSFLPTKDTVATSILSKRWNPLWLSV 136


>Medtr3g082890.2 | cyclin-like F-box protein | HC |
          chr3:37418045-37419774 | 20130731
          Length = 441

 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 26/35 (74%)

Query: 2  LPDEIFYHILSVLPTKQAIATSVLSRRWSLLCTSV 36
          LPD I  HILS LPTK  +ATS+LS+RW+ L  SV
Sbjct: 22 LPDSIICHILSFLPTKDTVATSILSKRWNPLWLSV 56