Miyakogusa Predicted Gene

Lj3g3v3026760.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3026760.4 CUFF.45209.4
         (1117 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g056510.1 | coiled-coil protein | HC | chr4:20718802-20736...  1746   0.0  

>Medtr4g056510.1 | coiled-coil protein | HC | chr4:20718802-20736987 |
            20130731
          Length = 1121

 Score = 1746 bits (4521), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 879/1121 (78%), Positives = 925/1121 (82%), Gaps = 17/1121 (1%)

Query: 1    MQPNLFPFGSVLGN-PFIFDADLSDXXXXXXXXXXIDSSRVFFLLPFFLLSQGGAMDLSK 59
            MQPNLFPFGS L N PFI +               IDSSRV  LLPFFLLSQGGAMDLSK
Sbjct: 1    MQPNLFPFGSALSNNPFILNE------GGGGGEGGIDSSRVLVLLPFFLLSQGGAMDLSK 54

Query: 60   VGEKILSSVRSARSLGLLPPASDRPEVPXXXXXXXXXXXXXXGLPPHQRYXXXXXXXXXX 119
            VGEKI SSV+SARSLGLLP   DRPEVP              GLPPHQRY          
Sbjct: 55   VGEKIFSSVKSARSLGLLPSLPDRPEVPARAVAAAAVARALAGLPPHQRYSLSSSSEELS 114

Query: 120  XIYGSRPGQ-VVXXXXXXXXXXDFDPIKHVLEHIPAEENELSYFEKQAALRLAQLDKVAE 178
             IYGSR    VV          DFDPI+HVLEH+P+EENEL+YFEKQA LR+ QLDKVAE
Sbjct: 115  SIYGSRSNDPVVEELEDEFYEEDFDPIRHVLEHVPSEENELTYFEKQATLRITQLDKVAE 174

Query: 179  HLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKK 238
            HLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSS+NEVSRDLIVNSYSKK
Sbjct: 175  HLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSLNEVSRDLIVNSYSKK 234

Query: 239  KQALMDMLPVLTELQRSLDMQSMLESLVEEGNYWKAFQVLSEYLQLLDSLSELSAIQEMS 298
            KQAL+DMLPVLTEL+R+LDMQS LE LVEEGNYWKAFQVLSEYLQLL+S  ELSA+QEMS
Sbjct: 235  KQALVDMLPVLTELRRALDMQSTLEFLVEEGNYWKAFQVLSEYLQLLESFPELSAMQEMS 294

Query: 299  RGVEVWLGRTLQKLDALLLEVCQEFKEDGYITVIDAYALIGDTTGLAEKIQSFFMQEVIS 358
             GVEVWLGRTLQKLDALLL+VCQEFKED Y+TVIDAYALIGDT+GLAEKIQSFFMQEVIS
Sbjct: 295  HGVEVWLGRTLQKLDALLLDVCQEFKEDDYLTVIDAYALIGDTSGLAEKIQSFFMQEVIS 354

Query: 359  ETHSVLKAIVHEDEEGLAQNSRFTYSDLCLQIPESKFRQCLLRTLAVLFDLMCSYHEIMD 418
            ETHSVLK IVHEDEEGLAQNSR TYSDLCLQIP+SKFRQCLLRTLAVLFDLMCSYHEIMD
Sbjct: 355  ETHSVLKTIVHEDEEGLAQNSRLTYSDLCLQIPDSKFRQCLLRTLAVLFDLMCSYHEIMD 414

Query: 419  FQLARKDSAAQASNMCNEDTSCSPGEAQEVDSNIGVCNNSMXXXXXXXXXXXXXXXXXXX 478
            FQL RKDS  Q S+ CNED+SCS GEA+EVDS    CNNSM                   
Sbjct: 415  FQLERKDSVPQTSDKCNEDSSCSLGEAREVDSVATACNNSMSSSGDVIHDSSSTISAPTE 474

Query: 479  XXXXXXXVTAGSPHSDSHGPVNEAGQEENSVSSIESPWYYLRKEATTFVSQTLQRGRKNL 538
                   +T   P+SD H PV+EA +EE+S SSI+SPWY+LRKEATTFVSQTLQRGRKNL
Sbjct: 475  -------ITGSPPYSDFHDPVDEAREEESSASSIDSPWYHLRKEATTFVSQTLQRGRKNL 527

Query: 539  WHLTXXXXXXXXXXXXXXXXXIHQFLKNYEDLSVFILTGEAFCGIEAVEFRQKLKVVCEN 598
            WHLT                 IH FLKNYEDLSVFILTGEAFCGIE VEFRQKLKVVCEN
Sbjct: 528  WHLTASRVSVLLSSAAACSASIHLFLKNYEDLSVFILTGEAFCGIEVVEFRQKLKVVCEN 587

Query: 599  YFIAFHRQNVHALKMVLEKETWLKLPPDTIQIISFAGLIGDGAPLISLSSGKSMNVNAIH 658
            YFIAFHRQNVHALKMVLEKETWLKLPP+T+Q+ISFAGLIGDGAPLISLS  KSMN+NAIH
Sbjct: 588  YFIAFHRQNVHALKMVLEKETWLKLPPETVQLISFAGLIGDGAPLISLSVSKSMNINAIH 647

Query: 659  SD-KSVSMVRTSSRKSGFSHWIKNGNPFLQKLSTSKEGHGHSQPNGSTYGELDGGSTNNI 717
            S+ KSV+MV T +RKSGFSHWIKNGNPFL KLSTSKEGHG  QPNGS+YGE DGGS NN 
Sbjct: 648  SNNKSVNMVHTGARKSGFSHWIKNGNPFLPKLSTSKEGHGIPQPNGSSYGEFDGGSVNNY 707

Query: 718  HDDKVSPRKNGSNQLNGANSVSEDENEDLLADFIDEDSQLPSRISKPHHSR-NHSHGNDE 776
            HDD+VS RKN S+ LNGANSVSEDENEDLLADFIDEDSQLPSR SKPHHSR N SHGNDE
Sbjct: 708  HDDRVSTRKNDSSPLNGANSVSEDENEDLLADFIDEDSQLPSRSSKPHHSRSNSSHGNDE 767

Query: 777  ESTTQTGSSLCLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFYSIYETFXXXXXXXX 836
            EST QTGSSLCLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFY IYETF        
Sbjct: 768  ESTAQTGSSLCLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFYFIYETFGQQNTNSS 827

Query: 837  XXXXXXXLNYRLRTALSRINQDCEEWIKPQXXXXXXXXXXFVHAEFTPMNPPNSNVGHSS 896
                   LNYRLRTALSRINQ+CEEW+KP           FVHAE TP +PPN N GH S
Sbjct: 828  GKSSVNSLNYRLRTALSRINQECEEWLKPPHSSSPTSSSSFVHAELTPTSPPNMNFGHPS 887

Query: 897  GTSLGLKERCVAVDTISLVARILNRSKAHLQSMLLQSNSTVLEDFYVHLVDAVPDLTEHV 956
            GT+  LKERCVAVDTISLVARILNRSKAHLQSMLLQSNSTVLEDFYVHLVDAVPDLTEHV
Sbjct: 888  GTAFSLKERCVAVDTISLVARILNRSKAHLQSMLLQSNSTVLEDFYVHLVDAVPDLTEHV 947

Query: 957  HRTTVRLLLHINGYVDRVANCKWEVKELGMEHNGYVDLLLGEFKHYKTRLAHGGIRKEIQ 1016
            H TTVRLLLHINGYVDRVANCKWEVKELGMEHNGYVDLLLGEFKH+KTRLAHGGIRKE Q
Sbjct: 948  HHTTVRLLLHINGYVDRVANCKWEVKELGMEHNGYVDLLLGEFKHFKTRLAHGGIRKETQ 1007

Query: 1017 DLLLDYGLEIVAEALVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSLNVKPKLQMVE 1076
            D LLDYGL+IVAE LVEGLSRVKRC+DEGRALMSLDLQVLINGL HF SLNVK KLQMVE
Sbjct: 1008 DTLLDYGLDIVAETLVEGLSRVKRCNDEGRALMSLDLQVLINGLKHFASLNVKSKLQMVE 1067

Query: 1077 TFIKAYYLPETEYVHWARAHPEYSKSQVVGLINLVATMKGW 1117
            TFIKAYYLPETEYVHWAR HPEYSKSQVVGL+NLVA+MKGW
Sbjct: 1068 TFIKAYYLPETEYVHWARGHPEYSKSQVVGLVNLVASMKGW 1108