Miyakogusa Predicted Gene

Lj3g3v2996010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2996010.1 tr|B6UEL5|B6UEL5_MAIZE COX VIIa-like protein
OS=Zea mays PE=4 SV=1,82.69,3e-18,COX7a,Cytochrome c oxidase, subunit
VIIa,CUFF.45145.1
         (67 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g101930.2 | acytochrome-C oxidase/electron carrier protein...   121   2e-28
Medtr4g101930.1 | acytochrome-C oxidase/electron carrier protein...   120   2e-28
Medtr4g101930.3 | acytochrome-C oxidase/electron carrier protein...   120   2e-28
Medtr4g053330.2 | acytochrome-C oxidase/electron carrier protein...   115   7e-27
Medtr4g053330.1 | acytochrome-C oxidase/electron carrier protein...   115   7e-27
Medtr2g085045.1 | acytochrome-C oxidase/electron carrier protein...   109   6e-25
Medtr2g085045.2 | acytochrome-C oxidase/electron carrier protein...   109   6e-25

>Medtr4g101930.2 | acytochrome-C oxidase/electron carrier protein
          | HC | chr4:42173382-42174522 | 20130731
          Length = 73

 Score =  121 bits (303), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 56/66 (84%), Positives = 62/66 (93%)

Query: 2  SEAPFTPREKLFEKQKYFQNIQKHTYLKGRYDKITSVAIPIALAASSLFMIGRGIYNMSH 61
          +EAPF PREKL EKQKYFQN++KHT+LKG YDKITSVAIP+AL A+SLFMIGRGIYNMSH
Sbjct: 8  TEAPFRPREKLIEKQKYFQNLRKHTHLKGPYDKITSVAIPLALTAASLFMIGRGIYNMSH 67

Query: 62 GIGKKE 67
          GIGKKE
Sbjct: 68 GIGKKE 73


>Medtr4g101930.1 | acytochrome-C oxidase/electron carrier protein
          | HC | chr4:42174195-42174522 | 20130731
          Length = 70

 Score =  120 bits (302), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 56/66 (84%), Positives = 62/66 (93%)

Query: 2  SEAPFTPREKLFEKQKYFQNIQKHTYLKGRYDKITSVAIPIALAASSLFMIGRGIYNMSH 61
          +EAPF PREKL EKQKYFQN++KHT+LKG YDKITSVAIP+AL A+SLFMIGRGIYNMSH
Sbjct: 5  TEAPFRPREKLIEKQKYFQNLRKHTHLKGPYDKITSVAIPLALTAASLFMIGRGIYNMSH 64

Query: 62 GIGKKE 67
          GIGKKE
Sbjct: 65 GIGKKE 70


>Medtr4g101930.3 | acytochrome-C oxidase/electron carrier protein
          | HC | chr4:42174195-42174522 | 20130731
          Length = 70

 Score =  120 bits (302), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 56/66 (84%), Positives = 62/66 (93%)

Query: 2  SEAPFTPREKLFEKQKYFQNIQKHTYLKGRYDKITSVAIPIALAASSLFMIGRGIYNMSH 61
          +EAPF PREKL EKQKYFQN++KHT+LKG YDKITSVAIP+AL A+SLFMIGRGIYNMSH
Sbjct: 5  TEAPFRPREKLIEKQKYFQNLRKHTHLKGPYDKITSVAIPLALTAASLFMIGRGIYNMSH 64

Query: 62 GIGKKE 67
          GIGKKE
Sbjct: 65 GIGKKE 70


>Medtr4g053330.2 | acytochrome-C oxidase/electron carrier protein
          | HC | chr4:19240664-19235334 | 20130731
          Length = 70

 Score =  115 bits (289), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 61/66 (92%)

Query: 2  SEAPFTPREKLFEKQKYFQNIQKHTYLKGRYDKITSVAIPIALAASSLFMIGRGIYNMSH 61
          +EAPF PREKL E+QKYFQ+++ HT+LKG YDKITSVAIP+AL A+SLFMIGRGIYNMSH
Sbjct: 5  TEAPFRPREKLIERQKYFQHMRNHTHLKGPYDKITSVAIPLALTAASLFMIGRGIYNMSH 64

Query: 62 GIGKKE 67
          GIGKKE
Sbjct: 65 GIGKKE 70


>Medtr4g053330.1 | acytochrome-C oxidase/electron carrier protein
          | HC | chr4:19240678-19235334 | 20130731
          Length = 70

 Score =  115 bits (289), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 61/66 (92%)

Query: 2  SEAPFTPREKLFEKQKYFQNIQKHTYLKGRYDKITSVAIPIALAASSLFMIGRGIYNMSH 61
          +EAPF PREKL E+QKYFQ+++ HT+LKG YDKITSVAIP+AL A+SLFMIGRGIYNMSH
Sbjct: 5  TEAPFRPREKLIERQKYFQHMRNHTHLKGPYDKITSVAIPLALTAASLFMIGRGIYNMSH 64

Query: 62 GIGKKE 67
          GIGKKE
Sbjct: 65 GIGKKE 70


>Medtr2g085045.1 | acytochrome-C oxidase/electron carrier protein
          | HC | chr2:36096747-36094694 | 20130731
          Length = 69

 Score =  109 bits (272), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 51/65 (78%), Positives = 58/65 (89%)

Query: 3  EAPFTPREKLFEKQKYFQNIQKHTYLKGRYDKITSVAIPIALAASSLFMIGRGIYNMSHG 62
          E PF PREK+ EKQKYFQ+I KHTYLKG +D++TSVAIP ALAA+SLF+IGRGIYNMS G
Sbjct: 5  EPPFRPREKIIEKQKYFQHIPKHTYLKGPFDRVTSVAIPAALAATSLFLIGRGIYNMSLG 64

Query: 63 IGKKE 67
          IGKKE
Sbjct: 65 IGKKE 69


>Medtr2g085045.2 | acytochrome-C oxidase/electron carrier protein
          | HC | chr2:36096748-36094677 | 20130731
          Length = 69

 Score =  109 bits (272), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 51/65 (78%), Positives = 58/65 (89%)

Query: 3  EAPFTPREKLFEKQKYFQNIQKHTYLKGRYDKITSVAIPIALAASSLFMIGRGIYNMSHG 62
          E PF PREK+ EKQKYFQ+I KHTYLKG +D++TSVAIP ALAA+SLF+IGRGIYNMS G
Sbjct: 5  EPPFRPREKIIEKQKYFQHIPKHTYLKGPFDRVTSVAIPAALAATSLFLIGRGIYNMSLG 64

Query: 63 IGKKE 67
          IGKKE
Sbjct: 65 IGKKE 69