Miyakogusa Predicted Gene
- Lj3g3v2995580.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2995580.1 Non Characterized Hit- tr|C6TEB1|C6TEB1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36624 PE,78.31,0,C2H2
and C2HC zinc fingers,NULL; ZINC_FINGER_C2H2_2,Zinc finger, C2H2;
AZ2-RELATED,NULL; ZINC FINGER,CUFF.45098.1
(326 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g093095.1 | C2H2-type zinc finger protein | HC | chr1:4193... 277 1e-74
Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | ... 86 5e-17
Medtr2g093960.1 | C2H2-type zinc finger protein | LC | chr2:4003... 84 1e-16
Medtr1g016010.1 | C2H2-type zinc finger protein | HC | chr1:4158... 83 4e-16
Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |... 81 1e-15
Medtr2g099990.1 | C2H2-type zinc finger protein | HC | chr2:4289... 80 3e-15
Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |... 80 3e-15
Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC | chr1... 80 4e-15
Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC | chr1... 79 4e-15
Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC | chr1... 79 6e-15
Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC | chr1... 79 6e-15
Medtr2g099990.2 | C2H2-type zinc finger protein | HC | chr2:4289... 76 4e-14
Medtr2g017720.1 | F-box associated protein | LC | chr2:5437660-5... 56 4e-08
>Medtr1g093095.1 | C2H2-type zinc finger protein | HC |
chr1:41939075-41940250 | 20130731
Length = 294
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 126/173 (72%), Positives = 149/173 (86%), Gaps = 4/173 (2%)
Query: 143 RFWIPTPAQILVGPMQFVCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPA---A 199
++WIP+PAQILVGP QF C++C+KTFNR+NNMQMHMWGHGS++RKGP+SL+G +PA +
Sbjct: 99 QYWIPSPAQILVGPTQFSCTVCNKTFNRFNNMQMHMWGHGSQYRKGPESLKGPKPASSSS 158
Query: 200 MLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKLCGKTFAVKGDW 259
ML+LPCYCCA+GC+NNIN+PRA+PLKDFRTLQTHYKRKHG K F CRK C KTFAV+GDW
Sbjct: 159 MLKLPCYCCAEGCRNNINYPRARPLKDFRTLQTHYKRKHGGKSFECRK-CRKTFAVRGDW 217
Query: 260 RTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHDPLLPNSLDEVFEEENE 312
RTHEKNCGKLW+C CGSDFKHKRSLKDH+R+FG GH P SL + NE
Sbjct: 218 RTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGNGHAPHTLESLSFDGHKVNE 270
>Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | HC
| chr4:22086566-22083892 | 20130731
Length = 495
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 153 LVGPMQFVCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCAQGC 212
L+ +F+C IC+K F R N+Q+H GH P L+ +R Y C +
Sbjct: 61 LMATNRFLCEICNKGFQRDQNLQLHRRGHNL-----PWKLKQRANKDQIRKKVYVCPE-- 113
Query: 213 KNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKLCGKTFAVKGDWRTHEKNCGKLWY- 271
K ++H ++ L D ++ HY RKHG K + C K C K +AV+ DW+ H K CG Y
Sbjct: 114 KTCVHHEPSRALGDLTGIKKHYSRKHGEKKWKCEK-CSKKYAVQSDWKAHSKICGTREYK 172
Query: 272 CTCGSDFKHKRSLKDHIRSF 291
C CG+ F K S H R+F
Sbjct: 173 CDCGTIFSRKDSFITH-RAF 191
>Medtr2g093960.1 | C2H2-type zinc finger protein | LC |
chr2:40039886-40042385 | 20130731
Length = 414
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 146 IPTPAQILVGPMQFVCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPC 205
I + L+ +F+C +C+K F R N+Q+H GH P L+ ++R
Sbjct: 48 IALSPKSLMTSNRFICEVCNKGFKRDQNLQLHRRGHNL-----PWKLKQRNKLEVIRKKV 102
Query: 206 YCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKLCGKTFAVKGDWRTHEKN 265
Y C + K+ ++H ++ L D ++ H+ RKHG K + C K C K +AV+ DW+ H K
Sbjct: 103 YVCPE--KSCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDK-CSKKYAVQSDWKAHSKI 159
Query: 266 CG-KLWYCTCGSDFKHKRSLKDHIRSF 291
CG K + C CG+ F K S H R+F
Sbjct: 160 CGTKEYRCDCGTLFSRKDSFLTH-RAF 185
>Medtr1g016010.1 | C2H2-type zinc finger protein | HC |
chr1:4158857-4161721 | 20130731
Length = 452
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 10/142 (7%)
Query: 151 QILVGPMQFVCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCAQ 210
Q L+ +F+C IC+K F R N+Q+H GH P L+ ++R Y C +
Sbjct: 62 QTLLATNRFICEICNKGFQRDQNLQLHKRGHNL-----PWKLKKRNVNEIIRKKVYVCPE 116
Query: 211 GCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKLCGKTFAVKGDWRTHEKNCG-KL 269
++H ++ L D ++ H+ RKHG K + C K C K +AV+ DW+ H K CG K
Sbjct: 117 --PTCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCEK-CSKRYAVQSDWKAHSKICGTKE 173
Query: 270 WYCTCGSDFKHKRSLKDHIRSF 291
+ C CG+ F + S H R+F
Sbjct: 174 YKCDCGTLFSRRDSFITH-RAF 194
>Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |
chr8:5790010-5786899 | 20130731
Length = 517
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 13/141 (9%)
Query: 153 LVGPMQFVCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCAQ-G 211
L+ +F+C IC+K F R N+Q+H GH ++ + + +R Y C +
Sbjct: 85 LLAKNRFICEICNKGFQRDQNLQLHRRGHNLPWK------LKQRTSKEIRKKVYVCPEPT 138
Query: 212 CKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKLCGKTFAVKGDWRTHEKNCGKLWY 271
C ++H ++ L D ++ H+ RKHG K + C K C K +AV+ DW+ H K CG Y
Sbjct: 139 C---VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK-CSKKYAVQSDWKAHSKTCGTREY 194
Query: 272 -CTCGSDFKHKRSLKDHIRSF 291
C CG+ F + S H R+F
Sbjct: 195 RCDCGTLFSRRDSFITH-RAF 214
>Medtr2g099990.1 | C2H2-type zinc finger protein | HC |
chr2:42897047-42899888 | 20130731
Length = 468
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 13/169 (7%)
Query: 125 EEEPSKKTFNGCSFNQERRFWIPTPAQILVGPMQFVCSICSKTFNRYNNMQMHMWGHGSE 184
+E P+KK N + I + L+ +F+C IC+K F R N+Q+H GH
Sbjct: 41 DETPAKKRRNLPGNPDPQAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLP 100
Query: 185 FRKGPDSLRGTQPAAMLRLPCYCCAQ-GCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPF 243
++ + + +R Y C + C ++H ++ L D ++ H+ RKHG K +
Sbjct: 101 WK------LKQRTSNEIRKKVYVCPEPTC---VHHDPSRALGDLTGIKKHFCRKHGEKKW 151
Query: 244 MCRKLCGKTFAVKGDWRTHEKNCGKLWY-CTCGSDFKHKRSLKDHIRSF 291
C K C K +AV+ DW+ H K CG Y C CG+ F + S H R+F
Sbjct: 152 KCDK-CSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITH-RAF 198
>Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |
chr2:38896799-38894235 | 20130731
Length = 429
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 146 IPTPAQILVGPMQFVCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPC 205
I + L+ +FVC IC K F R N+Q+H GH P L+ + +
Sbjct: 23 ISLSPKTLMATNRFVCEICLKDFQRDQNLQLHRRGHNL-----PWKLKQRTSKEIRKRVY 77
Query: 206 YCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKLCGKTFAVKGDWRTHEKN 265
C + C + NHP ++ L D ++ H+ RKHG K + C K C K +AV+ DW+ H K
Sbjct: 78 VCPEKTCVH--NHP-SRALGDLTGIKKHFCRKHGEKKWKCEK-CSKFYAVQSDWKAHSKT 133
Query: 266 CGKLWY-CTCGSDFKHKRSLKDHIRSF 291
CG Y C CG+ F + S H R+F
Sbjct: 134 CGTREYKCDCGTIFSRRDSFVTH-RAF 159
>Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC |
chr1:42286106-42289867 | 20130731
Length = 539
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 146 IPTPAQILVGPMQFVCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPC 205
I + L+ +F+C +C+K F R N+Q+H GH ++ S + +P R
Sbjct: 63 IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNK--EP----RRKV 116
Query: 206 YCCAQ-GCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKLCGKTFAVKGDWRTHEK 264
Y C + C ++H ++ L D ++ H+ RKHG K + C K C K +AV+ DW+ H K
Sbjct: 117 YLCPEPTC---VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK-CSKKYAVQSDWKAHSK 172
Query: 265 NCGKLWY-CTCGSDFKHKRSLKDHIRSF 291
CG Y C CG+ F + S H R+F
Sbjct: 173 TCGTREYRCDCGTLFSRRDSFITH-RAF 199
>Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC |
chr1:42286195-42289752 | 20130731
Length = 522
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 156 PMQFVCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCAQ-GCKN 214
P +F+C +C+K F R N+Q+H GH ++ S + +P R Y C + C
Sbjct: 56 PSKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNK--EP----RRKVYLCPEPTC-- 107
Query: 215 NINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKLCGKTFAVKGDWRTHEKNCGKLWY-CT 273
++H ++ L D ++ H+ RKHG K + C K C K +AV+ DW+ H K CG Y C
Sbjct: 108 -VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEK-CSKKYAVQSDWKAHSKTCGTREYRCD 165
Query: 274 CGSDFKHKRSLKDHIRSF 291
CG+ F + S H R+F
Sbjct: 166 CGTLFSRRDSFITH-RAF 182
>Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC |
chr1:50789869-50782797 | 20130731
Length = 582
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 146 IPTPAQILVGPMQFVCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPC 205
I + L+ +F+C +C+K F R N+Q+H GH ++ + + +P + L
Sbjct: 71 IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK--EPKRKVYL-- 126
Query: 206 YCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKLCGKTFAVKGDWRTHEKN 265
C C ++H ++ L D ++ HY RKHG K + C K C K +AV+ DW+ H K
Sbjct: 127 -CPEPTC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDK-CSKKYAVQSDWKAHSKT 181
Query: 266 CGKLWY-CTCGSDFKHKRSLKDHIRSF 291
CG Y C CG+ F + S H R+F
Sbjct: 182 CGTREYRCDCGTLFSRRDSFITH-RAF 207
>Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC |
chr1:50790900-50782752 | 20130731
Length = 571
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 146 IPTPAQILVGPMQFVCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPC 205
I + L+ +F+C +C+K F R N+Q+H GH ++ + + +P + L
Sbjct: 60 IALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK--EPKRKVYL-- 115
Query: 206 YCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKLCGKTFAVKGDWRTHEKN 265
C C ++H ++ L D ++ HY RKHG K + C K C K +AV+ DW+ H K
Sbjct: 116 -CPEPTC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDK-CSKKYAVQSDWKAHSKT 170
Query: 266 CGKLWY-CTCGSDFKHKRSLKDHIRSF 291
CG Y C CG+ F + S H R+F
Sbjct: 171 CGTREYRCDCGTLFSRRDSFITH-RAF 196
>Medtr2g099990.2 | C2H2-type zinc finger protein | HC |
chr2:42897047-42899888 | 20130731
Length = 399
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 13/136 (9%)
Query: 158 QFVCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCAQ-GCKNNI 216
+F+C IC+K F R N+Q+H GH ++ + + +R Y C + C +
Sbjct: 5 RFICEICNKGFQRDQNLQLHKRGHNLPWK------LKQRTSNEIRKKVYVCPEPTC---V 55
Query: 217 NHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKLCGKTFAVKGDWRTHEKNCGKLWY-CTCG 275
+H ++ L D ++ H+ RKHG K + C K C K +AV+ DW+ H K CG Y C CG
Sbjct: 56 HHDPSRALGDLTGIKKHFCRKHGEKKWKCDK-CSKKYAVQSDWKAHSKTCGTREYRCDCG 114
Query: 276 SDFKHKRSLKDHIRSF 291
+ F + S H R+F
Sbjct: 115 TLFSRRDSFITH-RAF 129
>Medtr2g017720.1 | F-box associated protein | LC |
chr2:5437660-5435484 | 20130731
Length = 432
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 153 LVGPMQFVCSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCAQGC 212
L+ +FVC IC K F R N+Q+H GH P L+ + + +R Y C +
Sbjct: 336 LMATNRFVCEICLKDFQRDQNLQLHRRGHNL-----PWKLK-QRTSKKIRKRVYVCPEKI 389
Query: 213 KNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKLCGKTFAVKGDWRTH 262
+ + NHP ++ L D ++ H+ RKHG K C K + V+ DW+ H
Sbjct: 390 RVH-NHP-SRALGDLTGIKKHFCRKHGEKK------CSKFYVVQSDWKAH 431