Miyakogusa Predicted Gene
- Lj3g3v2993420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2993420.1 Non Characterized Hit- tr|I1LKQ8|I1LKQ8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35313 PE,73,0,GTPase
activation domain, GAP,Rho GTPase activation protein; P21-Rho-binding
domain,PAK-box/P21-Rho-,CUFF.45084.1
(489 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g086580.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti... 572 e-163
Medtr4g052850.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti... 494 e-140
Medtr7g104900.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti... 456 e-128
Medtr8g026680.1 | Rac GTPase activating protein | HC | chr8:9249... 412 e-115
Medtr1g089500.1 | Rac GTPase activating protein | HC | chr1:3999... 376 e-104
Medtr7g107560.1 | Rac GTPase activating protein | HC | chr7:4387... 349 3e-96
Medtr5g064420.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti... 251 8e-67
Medtr7g081615.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti... 214 2e-55
>Medtr2g086580.1 | PAK-box/P21-Rho-binding domain Rho GTPase
activating protein | HC | chr2:36405412-36408662 |
20130731
Length = 451
Score = 572 bits (1473), Expect = e-163, Method: Compositional matrix adjust.
Identities = 283/412 (68%), Positives = 327/412 (79%), Gaps = 5/412 (1%)
Query: 82 TQQELSLLAILVTLLRKSLVACKSEG-RELCAMEIGWPTNVRHVAHVTFDRFNGFLGLPV 140
+Q L +LVTL RKSL KS G ++LC M+I PTNVRHVAHVTFDRFNGFLGLP
Sbjct: 41 SQPHFPLFELLVTLFRKSLFPFKSSGNKDLCNMDISPPTNVRHVAHVTFDRFNGFLGLPD 100
Query: 141 EFEPEVPTRPPSASATVFGVSTESMQLSYDTRGNSVPTILLQMQRHLYAQGGLQAEGIFR 200
EFEP+ P RPPSASATVFGVSTESMQLSYD+RGNSVPTILL MQRHLY Q GLQ EGIFR
Sbjct: 101 EFEPDFPRRPPSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYVQEGLQVEGIFR 160
Query: 201 INADNTQEEYVRDQINRGVIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEHVMQCQNEE 260
INADN+QEE+VR+Q+N G++PE IDVHCLAGLIKAWFRELP+G+LDSLS E VMQCQ EE
Sbjct: 161 INADNSQEEHVRNQLNMGLVPEDIDVHCLAGLIKAWFRELPSGVLDSLSQEQVMQCQTEE 220
Query: 261 DCAELARQLPHTEASLLDWAINLMADVVQEEHLSKMNAHNIAMVFAPNMTQMADPLTALM 320
DC EL R LPH EA+LLDWAINLMADVV+ E+L+KMNA NIAMVFAPNMTQMADP TALM
Sbjct: 221 DCIELVRHLPHAEAALLDWAINLMADVVEHENLNKMNARNIAMVFAPNMTQMADPFTALM 280
Query: 321 YAVQVMNFLKTLILRTLQRRKDSVVEPSPRFDLEPSDENGEDQSPLGSYQQD--VAXXXX 378
YAVQVMNFLKTLILRTL+ RKDSVVE +PR +LEPSDENG + S+Q++ A
Sbjct: 281 YAVQVMNFLKTLILRTLRERKDSVVESNPRLNLEPSDENGHRRL-FESFQKEDTAAADNK 339
Query: 379 XXXXXXXXXKAVSECSPEPFQNKDSTEGEPESLMSSSEILVCEEDLYCQFPPKGNVGM-S 437
K V EC+PE + STE E SL+ +SE +C E+LYC+FPPK N+G +
Sbjct: 340 EAKEIFVSEKTVVECTPESLEKNSSTERESGSLIRTSENPICNEELYCEFPPKKNMGKNN 399
Query: 438 KTGQSSSSIAKKGFKKTRGQQPMIHGTVAVEKKGISNLSLIDSISERIEAWR 489
K+GQSSSS A+KG KKTRGQQP+I+G +VEKKG+ LS D+ S+R+EAWR
Sbjct: 400 KSGQSSSSNARKGSKKTRGQQPVINGKGSVEKKGMRTLSSTDTRSDRVEAWR 451
>Medtr4g052850.1 | PAK-box/P21-Rho-binding domain Rho GTPase
activating protein | HC | chr4:19175348-19178049 |
20130731
Length = 363
Score = 494 bits (1272), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/316 (77%), Positives = 269/316 (85%), Gaps = 7/316 (2%)
Query: 59 GFSTVTDGDSEEITVVTDRNHHRTQQELSLLAILVTLLRKSLVACKSEGRELCAMEIGWP 118
FSTVTD ++EEITV T+R +T+QELS LAILVTL RKSLV+C S+ AMEIG P
Sbjct: 44 SFSTVTDCEAEEITV-TERA--KTEQELSFLAILVTLFRKSLVSCASDAS---AMEIGHP 97
Query: 119 TNVRHVAHVTFDRFNGFLGLPVEFEPEVPTRPPSASATVFGVSTESMQLSYDTRGNSVPT 178
TNVRH+AHVTFDRFNGFLGLP+E P+VPT PPSASATVFGVSTESM+LSYD RGN VPT
Sbjct: 98 TNVRHLAHVTFDRFNGFLGLPLELVPQVPTTPPSASATVFGVSTESMKLSYDRRGNIVPT 157
Query: 179 ILLQMQRHLYAQGGLQAEGIFRINADNTQEEYVRDQINRGVIPEGIDVHCLAGLIKAWFR 238
ILL +Q HLYAQGGLQAEGIFRINADN QEEY+RDQ+N+GV+PE IDVHCLAGLIKAWFR
Sbjct: 158 ILLLIQEHLYAQGGLQAEGIFRINADNRQEEYLRDQLNKGVVPEDIDVHCLAGLIKAWFR 217
Query: 239 ELPTGILDSLSPEHVMQCQNEEDCAELARQLPHTEASLLDWAINLMADVVQEEHLSKMNA 298
ELP G+LDSLSPE VM CQ EEDCAEL QLPHTEASLL+W INLMADVVQEEHL+KMNA
Sbjct: 218 ELPRGVLDSLSPEQVMTCQTEEDCAELMSQLPHTEASLLNWTINLMADVVQEEHLNKMNA 277
Query: 299 HNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLQRRKDSVVEPSPRFDLEPSDE 358
NIAMVFAPNMT+MADPLTA MYAVQVMNFLKTL+ TL+ R DS VE SP F +EP DE
Sbjct: 278 RNIAMVFAPNMTRMADPLTAFMYAVQVMNFLKTLVSMTLKERNDSDVESSPEFYIEPFDE 337
Query: 359 NGEDQSPLGSYQQDVA 374
N E+ S S+QQDVA
Sbjct: 338 N-EEHSHCNSFQQDVA 352
>Medtr7g104900.1 | PAK-box/P21-Rho-binding domain Rho GTPase
activating protein | HC | chr7:42531591-42525668 |
20130731
Length = 477
Score = 456 bits (1173), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/419 (57%), Positives = 291/419 (69%), Gaps = 25/419 (5%)
Query: 86 LSLLAILVTLLRKSLVACKSEGRELCA-MEIGWPTNVRHVAHVTFDRFNGFLGLPVEFEP 144
LS+L +L+ RKSL+ C + G EL + MEIGWP+NVRHVAHVTFDRF+GFLGLPVEFEP
Sbjct: 69 LSILTLLIATFRKSLIGCTNTGSELSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEP 128
Query: 145 EVPTRPPSASATVFGVSTESMQLSYDTRGNSVPTILLQMQRHLYAQGGLQAEGIFRINAD 204
EVPTRPPSAS +VFGVSTESMQLS+D RGNSVPTILL MQRHLYAQGGLQAEGIFRINA+
Sbjct: 129 EVPTRPPSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAE 188
Query: 205 NTQEEYVRDQINRGVIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEHVMQCQNEEDCAE 264
N+QEE+VR+Q+NRGV+P GIDVHCLAGLIKAWFRELPTGILD LSPE VMQ Q EE+CA+
Sbjct: 189 NSQEEFVREQLNRGVVPNGIDVHCLAGLIKAWFRELPTGILDPLSPEQVMQSQTEEECAQ 248
Query: 265 LARQLPHTEASLLDWAINLMADVVQEEHLSKMNAHNIAMVFAPNMTQMADPLTALMYAVQ 324
L R LP TE++LLDWA+NLMADV Q EHL+KMNA NIAMVFAPNMT M DPLTALMYAVQ
Sbjct: 249 LVRLLPATESALLDWAVNLMADVAQMEHLNKMNARNIAMVFAPNMTHMVDPLTALMYAVQ 308
Query: 325 VMNFLKTLILRTLQRRKDSVVEPSPRFDLEPSDENG-EDQSPLGSYQQDVAXXXXXXXXX 383
VMNFLKTL+ TL+ R++S+ + +P +L D++G + SPL +
Sbjct: 309 VMNFLKTLVAMTLKEREESITKSNPSSNLNSFDDDGHQSDSPLLFKDESEYGNDYSDEDT 368
Query: 384 XXXXKAVSECSP-EPFQNKDSTEGEPESLMSSSEILVCEEDLYCQFPPKGN---VGMSKT 439
S+ SP F++ TE +SL +S+E F P GN V
Sbjct: 369 VFVTAEPSQQSPTHLFKDDCETESGSKSLQTSTE----------NFIPSGNRLLVDSCPC 418
Query: 440 GQSSSSIAKKGFKKTRGQQPMIHGTVAVEK---------KGISNLSLIDSISERIEAWR 489
G S + +T+ + + T +K +GI+ + I+S SE EAWR
Sbjct: 419 GVVSQICSMAIGDQTKNCKSLQLNTSDTDKCSAGSVEKNRGIALIGRINSRSELAEAWR 477
>Medtr8g026680.1 | Rac GTPase activating protein | HC |
chr8:9249397-9245785 | 20130731
Length = 492
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 186/281 (66%), Positives = 233/281 (82%), Gaps = 3/281 (1%)
Query: 64 TDGDSEEITVVTDRNHHRTQQELSLLAILVTLLRKSLVACKSEGRELCAMEIGWPTNVRH 123
++ S + T ++ NH Q + ++L I++ L+KS+V C E ++ +++I WPT VRH
Sbjct: 63 SNNASRQFTKGSNNNH---QNQFAILDIVMAALKKSIVTCSVEREDVSSLDISWPTEVRH 119
Query: 124 VAHVTFDRFNGFLGLPVEFEPEVPTRPPSASATVFGVSTESMQLSYDTRGNSVPTILLQM 183
V+HVTFDRFNGFLGLP EF+PEVPTR PSAS VFGVS +SMQ SYD RGNSVPTILL+M
Sbjct: 120 VSHVTFDRFNGFLGLPSEFQPEVPTRVPSASVKVFGVSAKSMQCSYDDRGNSVPTILLRM 179
Query: 184 QRHLYAQGGLQAEGIFRINADNTQEEYVRDQINRGVIPEGIDVHCLAGLIKAWFRELPTG 243
Q+ LY++GGL+AEGIFRI A+N+QE +VRDQ+N+GV+P GIDVHCL+GLIKAWFRELPTG
Sbjct: 180 QKQLYSEGGLKAEGIFRITAENSQEAFVRDQLNKGVVPHGIDVHCLSGLIKAWFRELPTG 239
Query: 244 ILDSLSPEHVMQCQNEEDCAELARQLPHTEASLLDWAINLMADVVQEEHLSKMNAHNIAM 303
+LDSL+PE VMQC E+DC L + LP TEA+LLDWAINLMADVV+ E +KMNA N+AM
Sbjct: 240 VLDSLTPEQVMQCNTEDDCTNLVKLLPSTEAALLDWAINLMADVVENEQFNKMNARNVAM 299
Query: 304 VFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLQRRKDSV 344
VFAPNMTQMADPLTAL++AVQVMNFLKTLIL+ L+ R++S+
Sbjct: 300 VFAPNMTQMADPLTALIHAVQVMNFLKTLILKMLREREESI 340
>Medtr1g089500.1 | Rac GTPase activating protein | HC |
chr1:39993064-39989777 | 20130731
Length = 483
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 173/256 (67%), Positives = 216/256 (84%), Gaps = 6/256 (2%)
Query: 96 LRKSLVACKSE--GRELCA----MEIGWPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPTR 149
+RKS+VAC+ + E+ + MEIGWPT+V+H+ HVTFDRFNGFLGLPVEFE E+P R
Sbjct: 44 IRKSMVACRVDRPDHEVISTVHQMEIGWPTDVQHITHVTFDRFNGFLGLPVEFEVEIPGR 103
Query: 150 PPSASATVFGVSTESMQLSYDTRGNSVPTILLQMQRHLYAQGGLQAEGIFRINADNTQEE 209
PSAS +VFGVS ESMQ SYD++GNSVPTIL+ MQ LY+QGGL+AEGIFRIN +N++EE
Sbjct: 104 VPSASVSVFGVSAESMQCSYDSKGNSVPTILMLMQDRLYSQGGLKAEGIFRINPENSKEE 163
Query: 210 YVRDQINRGVIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEHVMQCQNEEDCAELARQL 269
+VR+Q+N G++P+ IDVHCLAGLIKAWFRELP+G+LD LSPE V++C EE+ EL +QL
Sbjct: 164 HVRNQLNSGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESIELVKQL 223
Query: 270 PHTEASLLDWAINLMADVVQEEHLSKMNAHNIAMVFAPNMTQMADPLTALMYAVQVMNFL 329
TE++LL WAI+LMADVVQEE +KMNA NIAMVFAPNMTQM+DPLTALM+AVQVMN L
Sbjct: 224 KPTESALLSWAIDLMADVVQEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLL 283
Query: 330 KTLILRTLQRRKDSVV 345
KTLI++TL+ R+++
Sbjct: 284 KTLIMKTLREREETAT 299
>Medtr7g107560.1 | Rac GTPase activating protein | HC |
chr7:43875012-43878185 | 20130731
Length = 435
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 164/257 (63%), Positives = 202/257 (78%), Gaps = 6/257 (2%)
Query: 77 RNHHRTQQELSLLAILVTLLRKSLVACKSEGRELC------AMEIGWPTNVRHVAHVTFD 130
R +E+S A+++ L+KS+VAC E + MEIGWPTNV+HV HVTFD
Sbjct: 18 RGSRDGSEEVSPAALMLAALKKSMVACSVESPDDVISAVHHPMEIGWPTNVKHVNHVTFD 77
Query: 131 RFNGFLGLPVEFEPEVPTRPPSASATVFGVSTESMQLSYDTRGNSVPTILLQMQRHLYAQ 190
RFNGFLGLP+E E VP PSAS +VFGVS ESMQ SYD++GNSVPTILL MQ LY+Q
Sbjct: 78 RFNGFLGLPLELEVHVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQ 137
Query: 191 GGLQAEGIFRINADNTQEEYVRDQINRGVIPEGIDVHCLAGLIKAWFRELPTGILDSLSP 250
GGL+AEGIFRIN +N +EE++R+Q+N G++P IDVHCLAGLIKAWFRELP+G+LD LSP
Sbjct: 138 GGLKAEGIFRINPENGEEEHLREQLNSGIVPNDIDVHCLAGLIKAWFRELPSGVLDGLSP 197
Query: 251 EHVMQCQNEEDCAELARQLPHTEASLLDWAINLMADVVQEEHLSKMNAHNIAMVFAPNMT 310
E V++C EE+ EL +QL E++LL+WA++LMADVV EE +KM+A NIAMVFAPNMT
Sbjct: 198 EEVLECNTEEESVELVKQLKPVESALLNWAVDLMADVVVEEECNKMDARNIAMVFAPNMT 257
Query: 311 QMADPLTALMYAVQVMN 327
QM+DPLTALM+AVQVMN
Sbjct: 258 QMSDPLTALMHAVQVMN 274
>Medtr5g064420.1 | PAK-box/P21-Rho-binding domain Rho GTPase
activating protein | HC | chr5:27034836-27036920 |
20130731
Length = 238
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 126/173 (72%), Positives = 138/173 (79%), Gaps = 10/173 (5%)
Query: 133 NGFLGLPVEFEPEVPTRPPSASATVFGVSTESMQLSYDTRGNSVPTILLQMQRHLYAQGG 192
+GF+G F E+ ATVFGVSTESM+LSYD RGN VPTILL MQ HLYAQGG
Sbjct: 33 SGFIGSQEPFPLEI------GGATVFGVSTESMKLSYDRRGNIVPTILLLMQEHLYAQGG 86
Query: 193 LQAEGIFRINADNTQEEYVRDQINRGVIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEH 252
LQAEGIFRINADN QEEY RD++N+GV+PE IDVHCL GLIK + G+LDSLSPE
Sbjct: 87 LQAEGIFRINADNRQEEYHRDELNKGVVPEDIDVHCLTGLIKGATK----GVLDSLSPEQ 142
Query: 253 VMQCQNEEDCAELARQLPHTEASLLDWAINLMADVVQEEHLSKMNAHNIAMVF 305
VMQCQ EEDCAELA LPHTEASLL+W INLMADVVQEEHL+KMNA NIAMVF
Sbjct: 143 VMQCQTEEDCAELASHLPHTEASLLNWTINLMADVVQEEHLNKMNACNIAMVF 195
>Medtr7g081615.1 | PAK-box/P21-Rho-binding domain Rho GTPase
activating protein | HC | chr7:31295617-31296762 |
20130731
Length = 182
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/160 (62%), Positives = 127/160 (79%), Gaps = 2/160 (1%)
Query: 152 SASATVFGVSTESMQLSYDTRGNSVPTILLQMQRHLYAQGGLQAEGIFRINADNTQEEYV 211
+ S +VFGVS ESMQ SYD++GNSVP ILL MQ LY+QG + +GIF IN +N +EE++
Sbjct: 14 AISVSVFGVSVESMQCSYDSKGNSVPAILLLMQERLYSQG--RTKGIFCINLENGEEEHL 71
Query: 212 RDQINRGVIPEGIDVHCLAGLIKAWFRELPTGILDSLSPEHVMQCQNEEDCAELARQLPH 271
R+Q N G++P IDVHCLAGLIKAWFRELP+G+LD LSPE V++C EE+ EL + L
Sbjct: 72 REQFNSGIVPIDIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLECNTEEEFVELVKLLKP 131
Query: 272 TEASLLDWAINLMADVVQEEHLSKMNAHNIAMVFAPNMTQ 311
E++LL+WA++LMADVV EE +K+NA NIAMVFAPNMTQ
Sbjct: 132 VESALLNWAVDLMADVVVEEEYNKLNAINIAMVFAPNMTQ 171