Miyakogusa Predicted Gene

Lj3g3v2993390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2993390.1 Non Characterized Hit- tr|B9SCV1|B9SCV1_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,69.23,0.000000000000003,Q6YZI4_ORYSA_Q6YZI4;,NULL;
seg,NULL,CUFF.45083.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g052910.1 | copper ion-binding protein | HC | chr4:1919201...    94   2e-20
Medtr4g052910.3 | copper ion-binding protein | HC | chr4:1919230...    94   3e-20
Medtr4g052910.2 | copper ion-binding protein | HC | chr4:1919230...    94   3e-20

>Medtr4g052910.1 | copper ion-binding protein | HC |
          chr4:19192011-19187858 | 20130731
          Length = 163

 Score = 94.4 bits (233), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 49/54 (90%)

Query: 1  MATRVAARFISRRPFSSGSGKILSEEEKAAENAYFKKVEQEKLEKVARQGPQPE 54
          MATRVAARF SRR FSSGSGK+L EEEKA ENAYFKK EQEKLEK+AR+GPQPE
Sbjct: 44 MATRVAARFASRRLFSSGSGKVLGEEEKAVENAYFKKAEQEKLEKLARKGPQPE 97


>Medtr4g052910.3 | copper ion-binding protein | HC |
          chr4:19192304-19187316 | 20130731
          Length = 120

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 49/54 (90%)

Query: 1  MATRVAARFISRRPFSSGSGKILSEEEKAAENAYFKKVEQEKLEKVARQGPQPE 54
          MATRVAARF SRR FSSGSGK+L EEEKA ENAYFKK EQEKLEK+AR+GPQPE
Sbjct: 1  MATRVAARFASRRLFSSGSGKVLGEEEKAVENAYFKKAEQEKLEKLARKGPQPE 54


>Medtr4g052910.2 | copper ion-binding protein | HC |
          chr4:19192304-19187316 | 20130731
          Length = 120

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 49/54 (90%)

Query: 1  MATRVAARFISRRPFSSGSGKILSEEEKAAENAYFKKVEQEKLEKVARQGPQPE 54
          MATRVAARF SRR FSSGSGK+L EEEKA ENAYFKK EQEKLEK+AR+GPQPE
Sbjct: 1  MATRVAARFASRRLFSSGSGKVLGEEEKAVENAYFKKAEQEKLEKLARKGPQPE 54