Miyakogusa Predicted Gene

Lj3g3v2991350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2991350.1 Non Characterized Hit- tr|J3LGH4|J3LGH4_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G3,35.25,0.00000000005, ,gene.g50067.t1.1
         (252 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g104820.1 | hypothetical protein | HC | chr3:48317619-4831...   191   4e-49
Medtr2g098340.1 | hypothetical protein | HC | chr2:42041150-4204...    57   2e-08
Medtr4g065980.1 | hypothetical protein | HC | chr4:24849232-2484...    54   2e-07

>Medtr3g104820.1 | hypothetical protein | HC |
           chr3:48317619-48315579 | 20130731
          Length = 393

 Score =  191 bits (486), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 88/119 (73%), Positives = 101/119 (84%), Gaps = 4/119 (3%)

Query: 134 SKFGFKV----QGFMCISSVMTDSSADRAGLRELHEEASANGFLLVISRLEGKSTMPTSV 189
           ++FG ++    +GF+CI SVM D+SADR GLRELHEEA+ANGFLLVISRL+ K+T+PTSV
Sbjct: 269 ARFGMEIKRTEEGFVCIYSVMKDTSADRGGLRELHEEATANGFLLVISRLDDKNTIPTSV 328

Query: 190 CSSGLVHCCDHAEIKDSLTSAIDQYEMIQLHVMAWPNQTHPSPSKVVGFAALLPPQGSF 248
           CS GLVHCCDHAEIKD L SAIDQYE IQLHVMAWPNQT PSP+  VGFA LLPP+ SF
Sbjct: 329 CSDGLVHCCDHAEIKDLLISAIDQYETIQLHVMAWPNQTRPSPTHAVGFAGLLPPERSF 387



 Score =  186 bits (471), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 96/127 (75%), Positives = 104/127 (81%), Gaps = 2/127 (1%)

Query: 3   AASDHLQKNVCVKQVKQEVFDEWGESMPLPGDIIEGFSERDDADAGDSFSPVKTSSEFSS 62
           AASD  Q  VCVKQVKQEV DEW ESMPLPGDI+EGFSE D  DA  SF  VKT+SEFSS
Sbjct: 2   AASD--QTLVCVKQVKQEVADEWDESMPLPGDILEGFSEHDVDDADKSFVSVKTNSEFSS 59

Query: 63  QLGKINPKVEFIWIKVRRGDTSLILQTRIVQEKGSLLKRKYTIQAATDHRHVADLEDLTL 122
           QLGKIN +VE IWI+VRRGD  L LQT IVQ+K S+L+RKYTIQA TDHRH+ADL DLTL
Sbjct: 60  QLGKINRRVESIWIQVRRGDGLLKLQTCIVQQKVSVLRRKYTIQATTDHRHIADLADLTL 119

Query: 123 KQCTELQ 129
           KQC ELQ
Sbjct: 120 KQCIELQ 126


>Medtr2g098340.1 | hypothetical protein | HC |
           chr2:42041150-42045089 | 20130731
          Length = 482

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 31/149 (20%)

Query: 134 SKFGFKV----QGFMCISSVMTDSS--ADRAGLRELHEEASANGFLLVISRLEGKSTMPT 187
           SK GF +    +GF+ ISSV+   +  A R+GL  L++ A+    LLV+SR+  +  +P 
Sbjct: 302 SKLGFAISRTEEGFIFISSVINQENVPATRSGLSSLYKLATDTCRLLVVSRVSNQKVLPW 361

Query: 188 SVCSSGLVHCCDHAEIKDSLTSAIDQYEMIQLHVMAW------------------PNQTH 229
            V S+G + C D   +   L+        I LHV  W                  P+   
Sbjct: 362 MVSSTGAIRCYDTVSLSQKLSLHRHTRVPILLHVFLWDRSMVNSSGGSNRFRALSPSALQ 421

Query: 230 PSPSKV-VG------FAALLPPQGSFPTE 251
           P PS+V +G          LPP+ S PT+
Sbjct: 422 PLPSEVQIGRFSNETHTLPLPPEASDPTD 450


>Medtr4g065980.1 | hypothetical protein | HC |
           chr4:24849232-24844548 | 20130731
          Length = 489

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 9/100 (9%)

Query: 134 SKFGFKV----QGFMCISSVMTDSS-----ADRAGLRELHEEASANGFLLVISRLEGKST 184
           +K GF +    +GF+ ISS + D       A R+GL  L++ A+    LLV+SRL  +  
Sbjct: 304 TKLGFAISRTEEGFIFISSSVIDEGKESLPATRSGLSNLYKLATETSRLLVVSRLSNQRV 363

Query: 185 MPTSVCSSGLVHCCDHAEIKDSLTSAIDQYEMIQLHVMAW 224
           +P  V S+G + C D   +   L+        I LHV  W
Sbjct: 364 LPWMVSSTGAIRCYDTVSLSQKLSLHRHTKVPILLHVFLW 403