Miyakogusa Predicted Gene

Lj3g3v2991330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2991330.1 Non Characterized Hit- tr|I1IA92|I1IA92_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,31.58,0.0000000000002,Pollen_Ole_e_I,Pollen Ole e 1
allergen/extensin; seg,NULL,CUFF.45082.1
         (172 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g086680.1 | pollen Ole e I family allergens | HC | chr2:36...   211   3e-55

>Medtr2g086680.1 | pollen Ole e I family allergens | HC |
           chr2:36446668-36448760 | 20130731
          Length = 172

 Score =  211 bits (537), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 104/173 (60%), Positives = 124/173 (71%), Gaps = 2/173 (1%)

Query: 1   MAGFQVFTXXXXXXXXXRIDPSTCQVVNGKVSCVDCTQNHDLSDIKVLVKCEGVKKLALA 60
           MA   V T         RIDPS CQ+V GKVSC DC Q++D S IKV +KCEGVK +A+A
Sbjct: 1   MAFVHVITTLLFALALARIDPSVCQMVKGKVSCNDCAQDYDFSGIKVSMKCEGVKNMAMA 60

Query: 61  STEDNGFFKVDLPSDKTKPSSAGNCLAKLVGGPVQLYATRQNQVSQIIKSQEPNSYTIST 120
           +TE++G F VDL +   K     NC AKL+GGP  LYA+R+NQ SQI+K +E NSYT+ST
Sbjct: 61  TTENDGSFMVDLSTSHAK-LPYDNCHAKLLGGPNNLYASRRNQFSQIVKGKEENSYTLST 119

Query: 121 PLSFMKSCPQNTNCKAAK-PVGSSKTVDLPLPPEWGLAPSSYYVPFIPIIGIP 172
           PLSF  SCPQN  CK  K   GSSK+++ PLPPEWGLAPSSYY+PF PIIGIP
Sbjct: 120 PLSFFTSCPQNKECKTEKNEFGSSKSINFPLPPEWGLAPSSYYLPFFPIIGIP 172