Miyakogusa Predicted Gene

Lj3g3v2989280.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2989280.2 Non Characterized Hit- tr|I1LKP7|I1LKP7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.46,0,seg,NULL;
Mito_fiss_Elm1,Mitochondrial fission ELM1-like,CUFF.45074.2
         (335 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g052540.1 | fission ELM1 protein | HC | chr4:19062907-1905...   566   e-161
Medtr7g105230.1 | fission ELM1 protein | HC | chr7:42657309-4266...   430   e-120

>Medtr4g052540.1 | fission ELM1 protein | HC |
           chr4:19062907-19057315 | 20130731
          Length = 425

 Score =  566 bits (1458), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 272/334 (81%), Positives = 292/334 (87%), Gaps = 2/334 (0%)

Query: 2   IHSYSQLVLKSQERKLKPLPSGNGVSAGLLDVLEADVKQIANLARETYEKEGPLLVVACG 61
           +  YSQ++LKSQ++KL  +PS NG  AGLL VLEAD KQI N A+ETYEKEGPLLVVACG
Sbjct: 94  VRDYSQILLKSQQKKL--VPSVNGERAGLLGVLEADAKQIVNFAQETYEKEGPLLVVACG 151

Query: 62  RDTISAASSIKRLASENVFVVQIQHPRLHLNRFDMVIAPKHDYYPLTPEGQKQVPRFLRS 121
           RDTIS ASSIK LASENVFVVQIQHPRLHLNRFDMVI PKHDYYPLTP+GQ+QVPR LRS
Sbjct: 152 RDTISTASSIKSLASENVFVVQIQHPRLHLNRFDMVITPKHDYYPLTPQGQEQVPRLLRS 211

Query: 122 WITPRDPPDSHVVLTTGALHQIDFTSIRNAAATWHDEFAHVPRPLLVVNIGGPSSNCRYG 181
           WITPRDPPDSHV+LTTGALHQIDFTSIR+AAATWHDEFA V RPLLVVNIGGP+SNCRYG
Sbjct: 212 WITPRDPPDSHVILTTGALHQIDFTSIRSAAATWHDEFASVSRPLLVVNIGGPTSNCRYG 271

Query: 182 VDLAKQLAXXXXXXXXXXXXXRISFSERTPQKFCNIIVKELGNNPKVYIWDGQGPNLHMG 241
            DLAKQL              RISF+E+TPQK   IIVKELGNNPKVYIWDGQG N HMG
Sbjct: 272 GDLAKQLVASLLSVLASCGSVRISFTEKTPQKVAKIIVKELGNNPKVYIWDGQGRNPHMG 331

Query: 242 HLAWGDAFVVTADSVSMISEACSTGKPVYVVGAERCRWKFTEFHQSLREMGVVRPLTGSE 301
           HLAW DAFVVTADSVSMISEACSTGKPVYVVGAERC+WK+TEFH+SL ++GVVR  TGSE
Sbjct: 332 HLAWADAFVVTADSVSMISEACSTGKPVYVVGAERCKWKYTEFHRSLTDLGVVRSFTGSE 391

Query: 302 DISESWSYPPLNDTADAAKRVHEALAARGWKLKI 335
           DISESWSYPPLNDTADAAKR+ EALAARGWKLKI
Sbjct: 392 DISESWSYPPLNDTADAAKRIREALAARGWKLKI 425


>Medtr7g105230.1 | fission ELM1 protein | HC |
           chr7:42657309-42660789 | 20130731
          Length = 393

 Score =  430 bits (1105), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 198/308 (64%), Positives = 238/308 (77%)

Query: 27  SAGLLDVLEADVKQIANLARETYEKEGPLLVVACGRDTISAASSIKRLASENVFVVQIQH 86
           + G+  +LEAD   IA +AR+T+ KEGPLLVVA GRDTI+ A+SIKRLAS+NVF+VQIQH
Sbjct: 85  NVGISSILEADAHSIAKMARQTFYKEGPLLVVASGRDTINVATSIKRLASDNVFLVQIQH 144

Query: 87  PRLHLNRFDMVIAPKHDYYPLTPEGQKQVPRFLRSWITPRDPPDSHVVLTTGALHQIDFT 146
           PR  LNRFD++I P+HDYYPLTP  Q+Q+P FLR W+TP +PP  +VVLT GALHQ D  
Sbjct: 145 PRFLLNRFDLIITPRHDYYPLTPHAQRQLPWFLRRWVTPWEPPGRNVVLTVGALHQADSA 204

Query: 147 SIRNAAATWHDEFAHVPRPLLVVNIGGPSSNCRYGVDLAKQLAXXXXXXXXXXXXXRISF 206
           ++R AA+ WH+E A +P+PLLVVNIGGP+ NC YGVDLAK L              RISF
Sbjct: 205 ALRVAASAWHNELATLPKPLLVVNIGGPAGNCPYGVDLAKNLVVMLQNVLWSCGTMRISF 264

Query: 207 SERTPQKFCNIIVKELGNNPKVYIWDGQGPNLHMGHLAWGDAFVVTADSVSMISEACSTG 266
           S RTP+K   I+VKE   NPKV IWDG+GPN HMGHLAW DAFV+TADSVSM+SEACSTG
Sbjct: 265 SRRTPEKISKILVKEFSTNPKVQIWDGEGPNPHMGHLAWADAFVITADSVSMLSEACSTG 324

Query: 267 KPVYVVGAERCRWKFTEFHQSLREMGVVRPLTGSEDISESWSYPPLNDTADAAKRVHEAL 326
           KPVYV+GAE C WKF +F  SL++ GV RP TG E+I+ESW YPPLNDTA+AA +V  AL
Sbjct: 325 KPVYVIGAELCTWKFADFQNSLQKQGVARPFTGMENITESWYYPPLNDTAEAASQVIAAL 384

Query: 327 AARGWKLK 334
           A RGW ++
Sbjct: 385 AQRGWTIR 392