Miyakogusa Predicted Gene

Lj3g3v2948580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2948580.1 NODE_28521_length_1169_cov_156.222412.path2.1
         (360 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g051622.1 | pyridine nucleotide-disulfide oxidoreductase f...   608   e-174
Medtr4g051645.1 | pyridine nucleotide-disulfide oxidoreductase f...   482   e-136
Medtr2g061440.1 | hypothetical protein | LC | chr2:26045101-2604...    91   2e-18
Medtr0931s0010.1 | FAD-dependent pyridine nucleotide-disulfide o...    55   8e-08
Medtr8g094730.6 | NADH dehydrogenase | HC | chr8:39551672-395550...    53   4e-07
Medtr8g094730.5 | NADH dehydrogenase | HC | chr8:39551672-395550...    53   5e-07
Medtr8g094730.3 | NADH dehydrogenase | HC | chr8:39549738-395557...    52   6e-07
Medtr8g094730.2 | NADH dehydrogenase | HC | chr8:39549738-395550...    52   7e-07
Medtr8g094730.4 | NADH dehydrogenase | HC | chr8:39549738-395557...    52   7e-07
Medtr8g094730.1 | NADH dehydrogenase | HC | chr8:39549738-395550...    52   7e-07

>Medtr4g051622.1 | pyridine nucleotide-disulfide oxidoreductase
           family protein | HC | chr4:18590512-18587692 | 20130731
          Length = 360

 Score =  608 bits (1569), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 290/340 (85%), Positives = 319/340 (93%)

Query: 21  TLQHQASVTLIDPKEYFEIPWATLRAMVEPSFAERIVVNHREYFTKGDLVISSAINISET 80
           T+QH A+VTLID KEYFEIPWA+LRAMVEPSFAER V+NHREYFTKGDLVISSAINI+E+
Sbjct: 21  TIQHHANVTLIDLKEYFEIPWASLRAMVEPSFAERTVINHREYFTKGDLVISSAINITES 80

Query: 81  EVFTKDGQQIAYDYLVVATGHSDFFPKTRSERIDQYKGENTKIKSASSVLIVGGGPTGVE 140
           EVFT DG++ AYDYLV+ATGH++  PKTR+ER+DQYKGENTKIKSA SVLIVGGGPTGVE
Sbjct: 81  EVFTADGREFAYDYLVIATGHTESIPKTRTERLDQYKGENTKIKSARSVLIVGGGPTGVE 140

Query: 141 LAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKTLRWLKSRKVDVKLEQSVDLNSSTEG 200
           LAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKTL+WLKSRKVDVKLEQSVDL+S T  
Sbjct: 141 LAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKTLKWLKSRKVDVKLEQSVDLDSFTNE 200

Query: 201 NRTYLTSIGETIEADAHFLCIGKPLSSSWLSETILHDSLDGNGRIQVDEHLRVKGRSNIF 260
           NRTY TS+GE+IEAD HFLCIGKPLS++WL ET+L D LDG+GRIQVDE+LRVKGR+N+F
Sbjct: 201 NRTYQTSVGESIEADTHFLCIGKPLSTAWLGETLLKDDLDGHGRIQVDEYLRVKGRNNVF 260

Query: 261 AIGDIIDVKEIKQGVYAQGHAKLVAKNLRLLIEGGGKEHKLGTYKAQPTISIVSLGRKHG 320
           AIGDI D++EIKQGVYAQGHA+LVAKNL+LLIEGG KE KLGTYKAQP ISIVSLGRKHG
Sbjct: 261 AIGDITDIQEIKQGVYAQGHAQLVAKNLKLLIEGGAKERKLGTYKAQPAISIVSLGRKHG 320

Query: 321 VAQFPFMTIIGRLPGMIKSGDLFVGKTRKELGLEPNVKKS 360
           VAQFPFMTI+GRLPGMIKSGDLFVGKTRK LGLEPNVKKS
Sbjct: 321 VAQFPFMTIVGRLPGMIKSGDLFVGKTRKGLGLEPNVKKS 360


>Medtr4g051645.1 | pyridine nucleotide-disulfide oxidoreductase
           family protein | HC | chr4:18631470-18627464 | 20130731
          Length = 363

 Score =  482 bits (1241), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 233/338 (68%), Positives = 279/338 (82%), Gaps = 2/338 (0%)

Query: 21  TLQHQASVTLIDPKEYFEIPWATLRAMVEPSFAERIVVNHREYFTKGDLVISSAINISET 80
           +LQ  A V LIDPKEYFEI WA+LR+MVEPSFAER ++NHR+YFTKGDLV SSA+N++ET
Sbjct: 24  SLQFHAHVILIDPKEYFEITWASLRSMVEPSFAERTLINHRQYFTKGDLVTSSAVNVTET 83

Query: 81  EVFTKDGQQIAYDYLVVATGHSDFFPKTRSERIDQYKGENTKIKSASSVLIVGGGPTGVE 140
           EV T DGQ+IAYDYLV+ATGH+D  PK RSERI QYK EN KIKS+ S+LIVGGGPTGVE
Sbjct: 84  EVLTADGQKIAYDYLVIATGHADPVPKIRSERIHQYKEENEKIKSSRSILIVGGGPTGVE 143

Query: 141 LAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKTLRWLKSRKVDVKLEQSVDLNSSTEG 200
           LA EIAVDFPDKKVT+VHKG RLLE+IG KA+ KTLRWLKS+ V+VKL Q+V+LNS T+G
Sbjct: 144 LAGEIAVDFPDKKVTLVHKGPRLLEFIGSKAADKTLRWLKSKNVEVKLNQAVNLNSDTDG 203

Query: 201 -NRTYLTSIGETIEADAHFLCIGKPLSSSWLSETILHDSLDGNGRIQVDEHLRVKGRSNI 259
            N+ Y TS G+TIEAD HFLC GKP  SSWL E++L + LD  G I+VDE+LRV+GR+NI
Sbjct: 204 HNKIYRTSAGDTIEADCHFLCTGKPFGSSWLKESVLKNDLDVRGMIKVDENLRVRGRNNI 263

Query: 260 FAIGDIIDVKEIKQGVYAQGHAKLVAKNLRLLIEGGGKEHKLGTYKAQPTISIVSLGRKH 319
           FAIGDI ++ EIKQG  AQ  A++VAKNLR++IE GGKE    TYK    ++IVSLGR  
Sbjct: 264 FAIGDITNIPEIKQGFLAQKQAEVVAKNLRMMIE-GGKECWRETYKPHSVLAIVSLGRYD 322

Query: 320 GVAQFPFMTIIGRLPGMIKSGDLFVGKTRKELGLEPNV 357
            VAQ PF+TI GR+PG IKSGDLFVG+TRK++GL P++
Sbjct: 323 AVAQLPFLTISGRIPGYIKSGDLFVGRTRKQMGLSPHI 360


>Medtr2g061440.1 | hypothetical protein | LC |
           chr2:26045101-26040196 | 20130731
          Length = 602

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/80 (56%), Positives = 60/80 (75%)

Query: 138 GVELAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKTLRWLKSRKVDVKLEQSVDLNSS 197
           GVELA EIA DF D KVT+VHKG  LLEYIG KA  KTL+WLKS+ V+VKL+Q+V+LN +
Sbjct: 193 GVELAGEIASDFSDIKVTLVHKGPGLLEYIGEKAVDKTLKWLKSKNVEVKLDQAVNLNGA 252

Query: 198 TEGNRTYLTSIGETIEADAH 217
           T+G+ T   +  ++ ++  H
Sbjct: 253 TDGHHTISRTDSDSDQSRTH 272


>Medtr0931s0010.1 | FAD-dependent pyridine nucleotide-disulfide
           oxidoreductase | LC | scaffold0931:53-3988 | 20130731
          Length = 1008

 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 101/246 (41%), Gaps = 50/246 (20%)

Query: 75  INISETEVFTKDGQQIAYDYLVVATG-------HSD---FFPKTRS-ERIDQYKG----- 118
           I+ SE  V   +G +++YD LV+ATG       H +   F P  ++ E     +G     
Sbjct: 313 IDRSERAVILDNGSRLSYDTLVLATGARHAYFGHDEWEAFAPGLKTLEDATTIRGRILVA 372

Query: 119 --------ENTKIKSASSVLIVGGGPTGVELAAEIA-------------VDFPDKKVTIV 157
                   +  +  +  + +++GGGPTGVEL+  IA             +D    +V ++
Sbjct: 373 FEEAERSSDPERRAALQTFVVIGGGPTGVELSGTIAELARNTLASDFRSIDPRKTRVVLI 432

Query: 158 HKGSRLLEYIGPKASRKTLRWLKSRKVDVKLEQSVDLNSSTEGNRTYLTSIGETIEADAH 217
             G RLL       S  T R L+   V+V+L   V     TE +   +   G+T+ A   
Sbjct: 433 EAGPRLLSVFPEDLSEYTRRALEKLGVEVQLGAPV-----TECSADGVLVGGKTLPAKTI 487

Query: 218 FLCIGKPLSSS--WLSETILHDSLDGNGRIQVDEHLRVKGRSNIFAIGDIIDVKEIKQGV 275
               G   S +  WLS T      D  GR+ V   L V     IF +GD   V  +  G 
Sbjct: 488 VWAAGVQASPAARWLSATA-----DRAGRVLVGSDLTVPEHPEIFVVGDTAAVA-MPNGK 541

Query: 276 YAQGHA 281
           +  G A
Sbjct: 542 FVPGIA 547


>Medtr8g094730.6 | NADH dehydrogenase | HC | chr8:39551672-39555045
           | 20130731
          Length = 340

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 40/223 (17%)

Query: 82  VFTKDGQQIAYDYLVVA----------TGHSDF-FPKTRSERIDQYKGENTKIKSAS--- 127
           V  + G  I YD+LV+A           G ++F  P +  E   +     T ++  +   
Sbjct: 71  VHLESGLHIEYDWLVLALGAEAKLDVVPGATEFAIPFSTLEDARKVNNRLTILERKTFGK 130

Query: 128 ----SVLIVGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKT-LRWLKSR 182
               SV IVG G +GVELAA +A    ++ +        ++    P  +R+  L+ L SR
Sbjct: 131 DYQISVAIVGCGYSGVELAATVAERLQNRGIVRAINVDTMICPTAPPGNREAALKVLSSR 190

Query: 183 KVDVKLEQSVDL---NSSTEGNRT--------YLTSI--------GETIEADAHFLCIGK 223
           KV++ L   V+     S +E + T        Y+  +         + IEAD     +G 
Sbjct: 191 KVELLLGYFVNCIRKASESESSNTPKGLDFEKYILELQPAERGMQSKIIEADLVLWTVGS 250

Query: 224 --PLSSSWLSETILHDSLDGNGRIQVDEHLRVKGRSNIFAIGD 264
             PL     S+      L+  G+ + DE LRVKG   IF++GD
Sbjct: 251 KPPLPHLEYSDVPFVIPLNARGQAETDETLRVKGHPRIFSLGD 293


>Medtr8g094730.5 | NADH dehydrogenase | HC | chr8:39551672-39555045
           | 20130731
          Length = 421

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 40/223 (17%)

Query: 82  VFTKDGQQIAYDYLVVA----------TGHSDF-FPKTRSERIDQYKGENTKIKSAS--- 127
           V  + G  I YD+LV+A           G ++F  P +  E   +     T ++  +   
Sbjct: 71  VHLESGLHIEYDWLVLALGAEAKLDVVPGATEFAIPFSTLEDARKVNNRLTILERKTFGK 130

Query: 128 ----SVLIVGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKT-LRWLKSR 182
               SV IVG G +GVELAA +A    ++ +        ++    P  +R+  L+ L SR
Sbjct: 131 DYQISVAIVGCGYSGVELAATVAERLQNRGIVRAINVDTMICPTAPPGNREAALKVLSSR 190

Query: 183 KVDVKLEQSVDL---NSSTEGNRT--------YLTSI--------GETIEADAHFLCIGK 223
           KV++ L   V+     S +E + T        Y+  +         + IEAD     +G 
Sbjct: 191 KVELLLGYFVNCIRKASESESSNTPKGLDFEKYILELQPAERGMQSKIIEADLVLWTVGS 250

Query: 224 --PLSSSWLSETILHDSLDGNGRIQVDEHLRVKGRSNIFAIGD 264
             PL     S+      L+  G+ + DE LRVKG   IF++GD
Sbjct: 251 KPPLPHLEYSDVPFVIPLNARGQAETDETLRVKGHPRIFSLGD 293


>Medtr8g094730.3 | NADH dehydrogenase | HC | chr8:39549738-39555759
           | 20130731
          Length = 530

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 40/223 (17%)

Query: 82  VFTKDGQQIAYDYLVVA----------TGHSDF-FPKTRSERIDQYKGENTKIKSAS--- 127
           V  + G  I YD+LV+A           G ++F  P +  E   +     T ++  +   
Sbjct: 188 VHLESGLHIEYDWLVLALGAEAKLDVVPGATEFAIPFSTLEDARKVNNRLTILERKTFGK 247

Query: 128 ----SVLIVGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKT-LRWLKSR 182
               SV IVG G +GVELAA +A    ++ +        ++    P  +R+  L+ L SR
Sbjct: 248 DYQISVAIVGCGYSGVELAATVAERLQNRGIVRAINVDTMICPTAPPGNREAALKVLSSR 307

Query: 183 KVDVKLEQSVDL---NSSTEGNRT--------YLTSI--------GETIEADAHFLCIGK 223
           KV++ L   V+     S +E + T        Y+  +         + IEAD     +G 
Sbjct: 308 KVELLLGYFVNCIRKASESESSNTPKGLDFEKYILELQPAERGMQSKIIEADLVLWTVGS 367

Query: 224 --PLSSSWLSETILHDSLDGNGRIQVDEHLRVKGRSNIFAIGD 264
             PL     S+      L+  G+ + DE LRVKG   IF++GD
Sbjct: 368 KPPLPHLEYSDVPFVIPLNARGQAETDETLRVKGHPRIFSLGD 410


>Medtr8g094730.2 | NADH dehydrogenase | HC | chr8:39549738-39555045
           | 20130731
          Length = 457

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 40/223 (17%)

Query: 82  VFTKDGQQIAYDYLVVA----------TGHSDF-FPKTRSERIDQYKGENTKIKSAS--- 127
           V  + G  I YD+LV+A           G ++F  P +  E   +     T ++  +   
Sbjct: 188 VHLESGLHIEYDWLVLALGAEAKLDVVPGATEFAIPFSTLEDARKVNNRLTILERKTFGK 247

Query: 128 ----SVLIVGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKT-LRWLKSR 182
               SV IVG G +GVELAA +A    ++ +        ++    P  +R+  L+ L SR
Sbjct: 248 DYQISVAIVGCGYSGVELAATVAERLQNRGIVRAINVDTMICPTAPPGNREAALKVLSSR 307

Query: 183 KVDVKLEQSVDL---NSSTEGNRT--------YLTSI--------GETIEADAHFLCIGK 223
           KV++ L   V+     S +E + T        Y+  +         + IEAD     +G 
Sbjct: 308 KVELLLGYFVNCIRKASESESSNTPKGLDFEKYILELQPAERGMQSKIIEADLVLWTVGS 367

Query: 224 --PLSSSWLSETILHDSLDGNGRIQVDEHLRVKGRSNIFAIGD 264
             PL     S+      L+  G+ + DE LRVKG   IF++GD
Sbjct: 368 KPPLPHLEYSDVPFVIPLNARGQAETDETLRVKGHPRIFSLGD 410


>Medtr8g094730.4 | NADH dehydrogenase | HC | chr8:39549738-39555759
           | 20130731
          Length = 457

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 40/223 (17%)

Query: 82  VFTKDGQQIAYDYLVVA----------TGHSDF-FPKTRSERIDQYKGENTKIKSAS--- 127
           V  + G  I YD+LV+A           G ++F  P +  E   +     T ++  +   
Sbjct: 188 VHLESGLHIEYDWLVLALGAEAKLDVVPGATEFAIPFSTLEDARKVNNRLTILERKTFGK 247

Query: 128 ----SVLIVGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKT-LRWLKSR 182
               SV IVG G +GVELAA +A    ++ +        ++    P  +R+  L+ L SR
Sbjct: 248 DYQISVAIVGCGYSGVELAATVAERLQNRGIVRAINVDTMICPTAPPGNREAALKVLSSR 307

Query: 183 KVDVKLEQSVDL---NSSTEGNRT--------YLTSI--------GETIEADAHFLCIGK 223
           KV++ L   V+     S +E + T        Y+  +         + IEAD     +G 
Sbjct: 308 KVELLLGYFVNCIRKASESESSNTPKGLDFEKYILELQPAERGMQSKIIEADLVLWTVGS 367

Query: 224 --PLSSSWLSETILHDSLDGNGRIQVDEHLRVKGRSNIFAIGD 264
             PL     S+      L+  G+ + DE LRVKG   IF++GD
Sbjct: 368 KPPLPHLEYSDVPFVIPLNARGQAETDETLRVKGHPRIFSLGD 410


>Medtr8g094730.1 | NADH dehydrogenase | HC | chr8:39549738-39555045
           | 20130731
          Length = 538

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 40/223 (17%)

Query: 82  VFTKDGQQIAYDYLVVA----------TGHSDF-FPKTRSERIDQYKGENTKIKSAS--- 127
           V  + G  I YD+LV+A           G ++F  P +  E   +     T ++  +   
Sbjct: 188 VHLESGLHIEYDWLVLALGAEAKLDVVPGATEFAIPFSTLEDARKVNNRLTILERKTFGK 247

Query: 128 ----SVLIVGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKT-LRWLKSR 182
               SV IVG G +GVELAA +A    ++ +        ++    P  +R+  L+ L SR
Sbjct: 248 DYQISVAIVGCGYSGVELAATVAERLQNRGIVRAINVDTMICPTAPPGNREAALKVLSSR 307

Query: 183 KVDVKLEQSVDL---NSSTEGNRT--------YLTSI--------GETIEADAHFLCIGK 223
           KV++ L   V+     S +E + T        Y+  +         + IEAD     +G 
Sbjct: 308 KVELLLGYFVNCIRKASESESSNTPKGLDFEKYILELQPAERGMQSKIIEADLVLWTVGS 367

Query: 224 --PLSSSWLSETILHDSLDGNGRIQVDEHLRVKGRSNIFAIGD 264
             PL     S+      L+  G+ + DE LRVKG   IF++GD
Sbjct: 368 KPPLPHLEYSDVPFVIPLNARGQAETDETLRVKGHPRIFSLGD 410