Miyakogusa Predicted Gene

Lj3g3v2928440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2928440.1 Non Characterized Hit- tr|I1LRL7|I1LRL7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22241
PE,91.11,6e-18,coiled-coil,NULL; DUF3049,Protein of unknown function
DUF3049; seg,NULL,CUFF.45024.1
         (573 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g050590.1 | FAF-like protein | HC | chr4:17937667-17934695...   224   1e-58
Medtr2g087390.1 | FAF-like protein | LC | chr2:36759520-36761126...    83   8e-16
Medtr2g087430.1 | DUF3049 family protein | LC | chr2:36774830-36...    82   2e-15
Medtr2g087460.1 | FAF-like protein | LC | chr2:36787674-36789084...    81   3e-15
Medtr2g087470.1 | DUF3049 family protein | LC | chr2:36795973-36...    65   2e-10

>Medtr4g050590.1 | FAF-like protein | HC | chr4:17937667-17934695 |
           20130731
          Length = 566

 Score =  224 bits (572), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/314 (47%), Positives = 169/314 (53%), Gaps = 24/314 (7%)

Query: 19  SLKIEDETVLTQKHGIVTILGCDTEKN----KASSLRRTLSADMSSKKWLPQNGSSPK-Q 73
           ++KIE++TVL QK GIVTIL C+++ N       SLRRTLSADMSSKKWLP  GSS   +
Sbjct: 6   TMKIEEDTVLNQKQGIVTILNCNSDTNFTPNSPPSLRRTLSADMSSKKWLPPKGSSNLIK 65

Query: 74  KIASSEQLSDPKTIAXXXXXXXXXXXXXNKDXXXXXXXXXXXXXIWSSIQRNKKEEQDKA 133
           KI+SSE L                     K              IWSSIQ+NKKEEQ K 
Sbjct: 66  KISSSENLFQLHPNNSFSSSEEDGEFKETK-LDDEAEAERERLEIWSSIQKNKKEEQQKG 124

Query: 134 VAGSIDTWSSIISMKSNDEISKSLPPYIHPLVKRSKSCSLSVKSLEICTESLGSETGSDG 193
             GS DTW S++ +K+NDEISKSLPPYIHPL KR+KS SLS KSLEICTESLGSETGSDG
Sbjct: 125 --GSFDTWGSLMCLKTNDEISKSLPPYIHPLAKRTKS-SLSRKSLEICTESLGSETGSDG 181

Query: 194 ---VFSPSS-----------YTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 239
               + PS             +S                                     
Sbjct: 182 PVSSYPPSESLGSDTGSDGLLSSDPPSETEDTEEHQQNHLEQEPEEDKKEVEDKEQEVLE 241

Query: 240 IPRYNNYAVTATTKKXXXXXXXXXXXXXXNQTGPSLLHMRPYRDNGRLVLEAVTLPSLNN 299
           + R+N   V ATTKK               Q GPS   MRP   NGRLVLEAV+LPSLNN
Sbjct: 242 VARFNYGGVAATTKKSPPRSFPPPLPSLSRQDGPS-FQMRPPPHNGRLVLEAVSLPSLNN 300

Query: 300 FSVQRQDGRLVLTF 313
           F VQRQDGRLVLTF
Sbjct: 301 FCVQRQDGRLVLTF 314



 Score =  138 bits (347), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/204 (47%), Positives = 111/204 (54%), Gaps = 37/204 (18%)

Query: 397 VMEKGLKFSSGATSVKRVAL-------MVNKPIGLVNRNPSWSXXXXXXXXXXXXXXXX- 448
           V+EKG   S   T++K           MVNKPIG+VN NP WS                 
Sbjct: 373 VIEKGSFMSFDKTTIKSSIHWIGSNNKMVNKPIGVVNMNPKWSKKFNNEVDNKNFEDKDV 432

Query: 449 ---DASPCQIAQSLPPRPRVARLIPSKTXXXXXXXXXXXXXXXXXYEQYWRTTTKSSTN- 504
              +AS  Q+ +SLPPRPRVARLIPS                   YE YWRTT  ++T  
Sbjct: 433 QVVEAS--QMVKSLPPRPRVARLIPS------APNAATGSFNLNAYEHYWRTTKPTTTAT 484

Query: 505 -GVTNPLA--QEDNKNSA------------LKNYNSNKLIVSNENQQVLVLRGKNGDYLV 549
            G   PL   QE+N N+             +KN N N   VSN+ QQVLVL+GKNGDYLV
Sbjct: 485 KGGNYPLGPYQENNNNNNNKNKIVVSAAGDMKNMNINH--VSNDKQQVLVLKGKNGDYLV 542

Query: 550 HNLKSCKDSRRSFLFWEPYCIATS 573
           HNLKSCKDSRRSFLFWEPYCIATS
Sbjct: 543 HNLKSCKDSRRSFLFWEPYCIATS 566


>Medtr2g087390.1 | FAF-like protein | LC | chr2:36759520-36761126 |
           20130731
          Length = 308

 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 47/71 (66%), Positives = 53/71 (74%), Gaps = 5/71 (7%)

Query: 134 VAGSIDTWSSIISMKSNDEISKS-LPPYIHPLVKRSKSCSLSVKSLEICTESLGSETGSD 192
           V   +D WSSI++ K+ DE S+S  PPYIHPLVK S +  LS KSLEICTESLGSETGSD
Sbjct: 5   VTSELDIWSSILNQKNKDEASQSKTPPYIHPLVKNSNN-YLSAKSLEICTESLGSETGSD 63

Query: 193 GVFSPSSYTSS 203
           G    SSYTSS
Sbjct: 64  GF---SSYTSS 71



 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 78/180 (43%), Gaps = 40/180 (22%)

Query: 397 VMEKGLKFSSGATSVKRVALMVNKPIGLVNRNPSWSXXXXXXXXXXXXXXXXDASPCQIA 456
           V+EK    SS  T++  + L VNK I LVN+ P  S                D    Q  
Sbjct: 165 VIEKTHMLSSEITNISNLELAVNKSIWLVNKRPKCSKFNQVFNFE-------DVKVVQHG 217

Query: 457 QSLPPRPRVARLIPSKTXXXXXXXXXXXXXXXXXYEQYWRTTTKSS--TNGVTNPLAQED 514
            SLP                              YE YWR     S   N ++N +    
Sbjct: 218 -SLP--------------------------MINGYEYYWRNKAAPSDQQNSISNKVVNVV 250

Query: 515 NKNSALKNYNSNKLIVSNENQQVLVLRGKNGDYLVHNLKSCKDSR--RSFLFWEPYCIAT 572
           + N  +    SN+   S ++QQ+ VLRG N DYLVH+LK CKDSR  RSF+FW+  CIAT
Sbjct: 251 SGNMNINQLASNE--ASQDSQQLFVLRGVNKDYLVHSLKFCKDSRTTRSFMFWDQCCIAT 308


>Medtr2g087430.1 | DUF3049 family protein | LC |
           chr2:36774830-36776659 | 20130731
          Length = 283

 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/70 (64%), Positives = 52/70 (74%), Gaps = 4/70 (5%)

Query: 134 VAGSIDTWSSIISMKSNDEISKS-LPPYIHPLVKRSKSCSLSVKSLEICTESLGSETGSD 192
           V G +D WSSI++ K  DE S+S  PPYIHPLVK S++  LS KSLE+CTE LGSE GSD
Sbjct: 31  VTGELDIWSSILTQKKKDEASQSKTPPYIHPLVKNSQNY-LSEKSLEMCTEILGSENGSD 89

Query: 193 GVFSPSSYTS 202
           G F  SSYTS
Sbjct: 90  GFF--SSYTS 97



 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 2/40 (5%)

Query: 276 LHMRPYRDNGRLVL--EAVTLPSLNNFSVQRQDGRLVLTF 313
           L MRP+RDNGRL L  E V++PS NNF  +RQ+GRL+LTF
Sbjct: 136 LKMRPHRDNGRLFLFLEVVSVPSHNNFLAKRQNGRLILTF 175


>Medtr2g087460.1 | FAF-like protein | LC | chr2:36787674-36789084 |
           20130731
          Length = 303

 Score = 81.3 bits (199), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 2/68 (2%)

Query: 134 VAGSIDTWSSIISMKSNDEISKS-LPPYIHPLVKRSKSCSLSVKSLEICTESLGSETGSD 192
           +   +D WSSI++ K+ DE S+S  PPYIHPLVK S +  LS KSLEICTESLGSETGSD
Sbjct: 10  ITSELDIWSSILNQKNKDEASQSKTPPYIHPLVKNSNNY-LSAKSLEICTESLGSETGSD 68

Query: 193 GVFSPSSY 200
           G  S +SY
Sbjct: 69  GFSSYTSY 76


>Medtr2g087470.1 | DUF3049 family protein | LC |
           chr2:36795973-36797089 | 20130731
          Length = 160

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 43/64 (67%), Gaps = 2/64 (3%)

Query: 124 RNKKEEQDKAVAGSIDTWSSIISMKSNDEISKS-LPPYIHPLVKRSKSCSLSVKSLEICT 182
           RN  +     V   +D WSSI++ K+ DE S S  PPYIHPLVK SK+  LS KSL+ICT
Sbjct: 18  RNGSQNSHLKVTSELDIWSSILNQKNKDEASHSKTPPYIHPLVKNSKNY-LSEKSLKICT 76

Query: 183 ESLG 186
           ESLG
Sbjct: 77  ESLG 80