Miyakogusa Predicted Gene

Lj3g3v2927360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2927360.1 Non Characterized Hit- tr|D8RJA2|D8RJA2_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,44.55,3e-19,E1_DerP2_DerF2,MD-2-related lipid-recognition;
seg,NULL; Domain involved in innate immunity and lipi,CUFF.45018.1
         (150 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g050400.1 | leguminosin group578 secreted peptide | HC | c...   154   3e-38
Medtr1g055425.1 | MD-like lipid recognition domain protein/ML do...   129   7e-31
Medtr1g055435.1 | MD-like lipid recognition domain protein/ML do...   125   1e-29
Medtr5g085900.1 | MD-like lipid recognition domain protein/ML do...   104   3e-23

>Medtr4g050400.1 | leguminosin group578 secreted peptide | HC |
           chr4:17844530-17842530 | 20130731
          Length = 155

 Score =  154 bits (388), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 79/117 (67%), Positives = 91/117 (77%), Gaps = 2/117 (1%)

Query: 26  QAKVTFKYCDKKADYAVKVTNIEISPNPVVSGDPATFKISATSGQAIDGGELAIGVSYVG 85
           QA VTFKYCDKKADY VKVT IEI PNPVVSG PATFKISATSG+A+ GG++ IGVSYVG
Sbjct: 23  QANVTFKYCDKKADYPVKVTGIEILPNPVVSGAPATFKISATSGKALYGGDVVIGVSYVG 82

Query: 86  VPVHTEKFDICDKVSCP-AKGNFLIPHTQTLPAFTPPGPYSLKMTLDNDKGELLTCI 141
           VPVH+E  D+C +VSCP A GNF+I H+QTLPA TPP   +  MT D   G  +T +
Sbjct: 83  VPVHSETIDLCKEVSCPVANGNFVISHSQTLPAITPPRYQTASMT-DCSSGSFITAM 138


>Medtr1g055425.1 | MD-like lipid recognition domain protein/ML
           domain protein | HC | chr1:24551966-24554982 | 20130731
          Length = 155

 Score =  129 bits (325), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 83/119 (69%), Gaps = 1/119 (0%)

Query: 33  YCDKKADYAVKVTNIEISPNPVVSGDPATFKISATSGQAIDGGELAIGVSYVGVPVHTEK 92
           YCDKKA Y ++V  ++ISP+P+  G PATF ISAT+ Q + GG++ I VSY G  V++E 
Sbjct: 31  YCDKKASYDIEVKEVQISPDPIARGRPATFTISATTNQTLSGGKVLIDVSYFGWHVYSET 90

Query: 93  FDICDKVSCP-AKGNFLIPHTQTLPAFTPPGPYSLKMTLDNDKGELLTCIKFNFKIVLG 150
            D+C + SCP + G+F++ H+Q LP FTPPG YSLKM + ++    LTCI F+F I  G
Sbjct: 91  KDLCGESSCPISVGDFVLAHSQVLPGFTPPGWYSLKMKMYDENNNELTCITFDFYIGFG 149


>Medtr1g055435.1 | MD-like lipid recognition domain protein/ML
           domain protein | HC | chr1:24562031-24565237 | 20130731
          Length = 156

 Score =  125 bits (314), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 60/116 (51%), Positives = 79/116 (68%), Gaps = 1/116 (0%)

Query: 33  YCDKKADYAVKVTNIEISPNPVVSGDPATFKISATSGQAIDGGELAIGVSYVGVPVHTEK 92
           YC KK  Y V+V  ++ISP+PV  G PATF ISA + QA+  G+L + VSY G  V++E 
Sbjct: 32  YCGKKDSYDVQVKGVQISPDPVARGQPATFTISANTSQALSEGKLVVDVSYFGWHVYSET 91

Query: 93  FDICDKVSCP-AKGNFLIPHTQTLPAFTPPGPYSLKMTLDNDKGELLTCIKFNFKI 147
            D+C + SCP + G+F+I H+Q LPA+TPPG YSLKM L +     LTCIKF F +
Sbjct: 92  HDLCGESSCPISVGDFVIAHSQVLPAYTPPGSYSLKMKLYDGNNNELTCIKFGFDV 147


>Medtr5g085900.1 | MD-like lipid recognition domain protein/ML
           domain protein | HC | chr5:37125563-37128450 | 20130731
          Length = 162

 Score =  104 bits (259), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 78/121 (64%), Gaps = 3/121 (2%)

Query: 30  TFKYCDKKADYAVKVTNIEISPNPVVSGDPATFKISATSGQAIDGGELAIGVSYVGVPVH 89
           + KYC+K A+YAV+++N+EI PNPVV G+P TFKI A +G+ I  G+L   +S+ G+   
Sbjct: 33  SLKYCEKGANYAVQISNVEILPNPVVRGEPFTFKIKAYTGEPILSGDLIYEISFAGIEGQ 92

Query: 90  TEKFD--ICDKVSCP-AKGNFLIPHTQTLPAFTPPGPYSLKMTLDNDKGELLTCIKFNFK 146
              F   + ++   P A G+FL+ HT+ LP  TPPG Y++K+T  +   + LTC+ F F 
Sbjct: 93  PAIFHHALSEETPLPVAPGHFLLTHTELLPPVTPPGTYNVKLTFKDQNDKQLTCVVFPFT 152

Query: 147 I 147
           I
Sbjct: 153 I 153