Miyakogusa Predicted Gene

Lj3g3v2927350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2927350.1 tr|B9PDN9|B9PDN9_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_795522
PE=4,44.63,7e-18,seg,NULL; coiled-coil,NULL,CUFF.45013.1
         (281 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g050330.1 | hypothetical protein | HC | chr4:17823325-1781...   462   e-130
Medtr1g090350.3 | hypothetical protein | HC | chr1:40488002-4048...   124   1e-28
Medtr1g090350.1 | hypothetical protein | HC | chr1:40488091-4048...   124   1e-28
Medtr1g090350.4 | hypothetical protein | HC | chr1:40488002-4048...   124   1e-28
Medtr1g090350.2 | hypothetical protein | HC | chr1:40488091-4048...   124   1e-28
Medtr1g090350.5 | hypothetical protein | HC | chr1:40489377-4048...   124   1e-28

>Medtr4g050330.1 | hypothetical protein | HC |
           chr4:17823325-17817413 | 20130731
          Length = 288

 Score =  462 bits (1189), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 231/288 (80%), Positives = 248/288 (86%), Gaps = 7/288 (2%)

Query: 1   MRRQGQYGDPSANTYAASQMHH-------MAGQRAETKSGSFEGRLEAFTPERENPYANS 53
           MRRQGQYGD SAN+Y ASQMHH       MAGQ  ETKSG+FEGRLEAFTPEREN Y NS
Sbjct: 1   MRRQGQYGDASANSYGASQMHHNHNHNHHMAGQSMETKSGNFEGRLEAFTPERENSYPNS 60

Query: 54  KPEGQWRWEVDESKMSNSMTSRVYNEGQGGDASRSYYQGQRPDPKLNLQNRSNSESRSQA 113
           KPEGQWRWE DESKMSNSM S +YNEGQGGDASRSY+QGQRPDPKL LQ+RSNS+SRSQA
Sbjct: 61  KPEGQWRWESDESKMSNSMPSHMYNEGQGGDASRSYFQGQRPDPKLALQSRSNSDSRSQA 120

Query: 114 HEEDMDVGYEGAHLSQTFEGLEKNFHDDIMKLTKEQDDAEDAEHARHREKINAINTQYEE 173
           HEE++DV YEG HLSQTFEGLE+NFHDDI+KLTKEQ D EDAEHARHREKINAIN+QYEE
Sbjct: 121 HEENIDVRYEGNHLSQTFEGLEQNFHDDIVKLTKEQHDVEDAEHARHREKINAINSQYEE 180

Query: 174 KLAALRARHSNRRADFLQRESNVRQQQYEQIIRDPYPSSGMPPREPHGYSNVDVSPAGGE 233
           KL ALRARH  RR +FLQRES  RQQQYEQIIRDPY  SG   R PH +SNV+ S +GGE
Sbjct: 181 KLEALRARHGKRRTEFLQRESRARQQQYEQIIRDPYSGSGTASRGPHAHSNVNASASGGE 240

Query: 234 VQRGYSADHFDPYRERARFLASGRDQGFETRGPYPGGRVYDTGSRYYN 281
            QRGYSADHFDPYRE++RFL S RDQGFE RGPYPGGRVYDTGSRYYN
Sbjct: 241 PQRGYSADHFDPYREQSRFLGSARDQGFEPRGPYPGGRVYDTGSRYYN 288


>Medtr1g090350.3 | hypothetical protein | HC |
           chr1:40488002-40484950 | 20130731
          Length = 253

 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 123/213 (57%), Gaps = 20/213 (9%)

Query: 78  NEGQGGDASRSYYQGQRPDPKLNLQNRSNSESRSQAHEEDMDVGYEGAHLSQTFEGLEKN 137
           NE QG +  + Y   +  D K++ QN++N E+  +A EEDM++GY+ +  + T+EGLE+ 
Sbjct: 45  NEAQGNNGIQRYIPDESIDTKVSQQNQANQET-DEAREEDMEIGYDESPPTPTYEGLEQR 103

Query: 138 FHDDIMKLTKEQDDAEDAEHARHREKINAINTQYEEKLAALRARHSNRRADFLQRESNVR 197
           F D+IMKL +++ D EDAE ARH E+I  INT+++EKL++LRA    RR +FL++E+  R
Sbjct: 104 FIDEIMKLVQDRSDKEDAEFARHNERIVEINTEFQEKLSSLRALQETRREEFLRKEAQAR 163

Query: 198 QQQYEQIIRDPYPSSGMPPREPHGYSNVDVSPAGGEVQR-GYSADHFDPYRERARFLASG 256
             Q + + R+ YP+  +   + +GY    +SP+   + R   S+  F    E  +++   
Sbjct: 164 LNQDQHVKRNRYPA--IKVEDANGY----LSPSTTFIAREATSSSRFHGLTEYNKYVGDP 217

Query: 257 RD------------QGFETRGPYPGGRVYDTGS 277
           ++            Q  ETR P P GRVY   S
Sbjct: 218 KECLTTTSNGMQTTQRNETRVPLPPGRVYKNSS 250


>Medtr1g090350.1 | hypothetical protein | HC |
           chr1:40488091-40484950 | 20130731
          Length = 253

 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 123/213 (57%), Gaps = 20/213 (9%)

Query: 78  NEGQGGDASRSYYQGQRPDPKLNLQNRSNSESRSQAHEEDMDVGYEGAHLSQTFEGLEKN 137
           NE QG +  + Y   +  D K++ QN++N E+  +A EEDM++GY+ +  + T+EGLE+ 
Sbjct: 45  NEAQGNNGIQRYIPDESIDTKVSQQNQANQET-DEAREEDMEIGYDESPPTPTYEGLEQR 103

Query: 138 FHDDIMKLTKEQDDAEDAEHARHREKINAINTQYEEKLAALRARHSNRRADFLQRESNVR 197
           F D+IMKL +++ D EDAE ARH E+I  INT+++EKL++LRA    RR +FL++E+  R
Sbjct: 104 FIDEIMKLVQDRSDKEDAEFARHNERIVEINTEFQEKLSSLRALQETRREEFLRKEAQAR 163

Query: 198 QQQYEQIIRDPYPSSGMPPREPHGYSNVDVSPAGGEVQR-GYSADHFDPYRERARFLASG 256
             Q + + R+ YP+  +   + +GY    +SP+   + R   S+  F    E  +++   
Sbjct: 164 LNQDQHVKRNRYPA--IKVEDANGY----LSPSTTFIAREATSSSRFHGLTEYNKYVGDP 217

Query: 257 RD------------QGFETRGPYPGGRVYDTGS 277
           ++            Q  ETR P P GRVY   S
Sbjct: 218 KECLTTTSNGMQTTQRNETRVPLPPGRVYKNSS 250


>Medtr1g090350.4 | hypothetical protein | HC |
           chr1:40488002-40484950 | 20130731
          Length = 256

 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 123/213 (57%), Gaps = 20/213 (9%)

Query: 78  NEGQGGDASRSYYQGQRPDPKLNLQNRSNSESRSQAHEEDMDVGYEGAHLSQTFEGLEKN 137
           NE QG +  + Y   +  D K++ QN++N E+  +A EEDM++GY+ +  + T+EGLE+ 
Sbjct: 48  NEAQGNNGIQRYIPDESIDTKVSQQNQANQET-DEAREEDMEIGYDESPPTPTYEGLEQR 106

Query: 138 FHDDIMKLTKEQDDAEDAEHARHREKINAINTQYEEKLAALRARHSNRRADFLQRESNVR 197
           F D+IMKL +++ D EDAE ARH E+I  INT+++EKL++LRA    RR +FL++E+  R
Sbjct: 107 FIDEIMKLVQDRSDKEDAEFARHNERIVEINTEFQEKLSSLRALQETRREEFLRKEAQAR 166

Query: 198 QQQYEQIIRDPYPSSGMPPREPHGYSNVDVSPAGGEVQR-GYSADHFDPYRERARFLASG 256
             Q + + R+ YP+  +   + +GY    +SP+   + R   S+  F    E  +++   
Sbjct: 167 LNQDQHVKRNRYPA--IKVEDANGY----LSPSTTFIAREATSSSRFHGLTEYNKYVGDP 220

Query: 257 RD------------QGFETRGPYPGGRVYDTGS 277
           ++            Q  ETR P P GRVY   S
Sbjct: 221 KECLTTTSNGMQTTQRNETRVPLPPGRVYKNSS 253


>Medtr1g090350.2 | hypothetical protein | HC |
           chr1:40488091-40484950 | 20130731
          Length = 256

 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 123/213 (57%), Gaps = 20/213 (9%)

Query: 78  NEGQGGDASRSYYQGQRPDPKLNLQNRSNSESRSQAHEEDMDVGYEGAHLSQTFEGLEKN 137
           NE QG +  + Y   +  D K++ QN++N E+  +A EEDM++GY+ +  + T+EGLE+ 
Sbjct: 48  NEAQGNNGIQRYIPDESIDTKVSQQNQANQET-DEAREEDMEIGYDESPPTPTYEGLEQR 106

Query: 138 FHDDIMKLTKEQDDAEDAEHARHREKINAINTQYEEKLAALRARHSNRRADFLQRESNVR 197
           F D+IMKL +++ D EDAE ARH E+I  INT+++EKL++LRA    RR +FL++E+  R
Sbjct: 107 FIDEIMKLVQDRSDKEDAEFARHNERIVEINTEFQEKLSSLRALQETRREEFLRKEAQAR 166

Query: 198 QQQYEQIIRDPYPSSGMPPREPHGYSNVDVSPAGGEVQR-GYSADHFDPYRERARFLASG 256
             Q + + R+ YP+  +   + +GY    +SP+   + R   S+  F    E  +++   
Sbjct: 167 LNQDQHVKRNRYPA--IKVEDANGY----LSPSTTFIAREATSSSRFHGLTEYNKYVGDP 220

Query: 257 RD------------QGFETRGPYPGGRVYDTGS 277
           ++            Q  ETR P P GRVY   S
Sbjct: 221 KECLTTTSNGMQTTQRNETRVPLPPGRVYKNSS 253


>Medtr1g090350.5 | hypothetical protein | HC |
           chr1:40489377-40484950 | 20130731
          Length = 256

 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 123/213 (57%), Gaps = 20/213 (9%)

Query: 78  NEGQGGDASRSYYQGQRPDPKLNLQNRSNSESRSQAHEEDMDVGYEGAHLSQTFEGLEKN 137
           NE QG +  + Y   +  D K++ QN++N E+  +A EEDM++GY+ +  + T+EGLE+ 
Sbjct: 48  NEAQGNNGIQRYIPDESIDTKVSQQNQANQET-DEAREEDMEIGYDESPPTPTYEGLEQR 106

Query: 138 FHDDIMKLTKEQDDAEDAEHARHREKINAINTQYEEKLAALRARHSNRRADFLQRESNVR 197
           F D+IMKL +++ D EDAE ARH E+I  INT+++EKL++LRA    RR +FL++E+  R
Sbjct: 107 FIDEIMKLVQDRSDKEDAEFARHNERIVEINTEFQEKLSSLRALQETRREEFLRKEAQAR 166

Query: 198 QQQYEQIIRDPYPSSGMPPREPHGYSNVDVSPAGGEVQR-GYSADHFDPYRERARFLASG 256
             Q + + R+ YP+  +   + +GY    +SP+   + R   S+  F    E  +++   
Sbjct: 167 LNQDQHVKRNRYPA--IKVEDANGY----LSPSTTFIAREATSSSRFHGLTEYNKYVGDP 220

Query: 257 RD------------QGFETRGPYPGGRVYDTGS 277
           ++            Q  ETR P P GRVY   S
Sbjct: 221 KECLTTTSNGMQTTQRNETRVPLPPGRVYKNSS 253