Miyakogusa Predicted Gene

Lj3g3v2923210.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2923210.2 tr|E9E828|E9E828_METAQ DNA repair protein RAD16
OS=Metarhizium acridum (strain CQMa 102) GN=MAC_0602,32.68,2e-19,Ring
finger,Zinc finger, RING-type; no description,Zinc finger,
RING/FYVE/PHD-type; RING/U-box,NULL;,CUFF.44997.2
         (153 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g049500.1 | RING/U-box helicase | HC | chr4:17406992-17415...   210   4e-55
Medtr1g115215.2 | chromatin remodeling protein | HC | chr1:51892...    54   6e-08
Medtr1g115215.1 | chromatin remodeling protein | HC | chr1:51892...    54   6e-08
Medtr2g012830.1 | SNF2, helicase and zinc finger protein | HC | ...    52   2e-07
Medtr2g084630.2 | DNA/RNA helicase | HC | chr2:35865773-35875405...    51   4e-07
Medtr2g084630.1 | DNA/RNA helicase | HC | chr2:35865804-35875314...    51   4e-07

>Medtr4g049500.1 | RING/U-box helicase | HC | chr4:17406992-17415500
           | 20130731
          Length = 935

 Score =  210 bits (535), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 105/153 (68%), Positives = 123/153 (80%), Gaps = 3/153 (1%)

Query: 2   NHYADIFGLLTKLRQAVDHPYLVVYSKPEALKGGGVAASDGTVEQVCGICDEPVEDPVVT 61
           N+YA IF LLT+LRQAVDHPYLVVYS   A + GG  AS+G VEQ CGIC + VEDPVVT
Sbjct: 636 NNYAHIFDLLTRLRQAVDHPYLVVYSPTAAARQGGNLASNGDVEQECGICHDTVEDPVVT 695

Query: 62  SCEHVFCNACLVDFSASMDPVLCPSCSLPITVEITSSKD-VSGKSNDTAIKGFRSSSILY 120
           SCEH FC  CL+DFSAS+  + CPSCS  +TV++TS+KD V  K+  T IKGFRSSSIL 
Sbjct: 696 SCEHTFCKGCLIDFSASLGQISCPSCSKLLTVDLTSNKDAVVDKT--TTIKGFRSSSILN 753

Query: 121 KIELENFQTSTKIEALREEIYFMIQRDGSAKGI 153
           +I++ENFQTSTKIEALREEI FM++RDGSAK I
Sbjct: 754 RIQIENFQTSTKIEALREEIRFMVERDGSAKAI 786


>Medtr1g115215.2 | chromatin remodeling protein | HC |
           chr1:51892999-51882725 | 20130731
          Length = 1040

 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 15/98 (15%)

Query: 3   HYADIFGLLTKLRQAVDHPYLVVYSKPEALKGGGVAASDG--------------TVEQVC 48
           +YA+I  +L +LRQA DHP LV     + +    V  +                T   +C
Sbjct: 677 NYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKKLPKEMLINLFNSLETTSAIC 736

Query: 49  GICDEPVEDPVVTSCEHVFCNACLVDFSASMDPVLCPS 86
            +C++P +D V++ C HVFC  C+ +   S D  +CP+
Sbjct: 737 CVCNDPPDDSVISMCGHVFCYQCVSEHLTS-DDNMCPA 773


>Medtr1g115215.1 | chromatin remodeling protein | HC |
           chr1:51892999-51882725 | 20130731
          Length = 1040

 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 15/98 (15%)

Query: 3   HYADIFGLLTKLRQAVDHPYLVVYSKPEALKGGGVAASDG--------------TVEQVC 48
           +YA+I  +L +LRQA DHP LV     + +    V  +                T   +C
Sbjct: 677 NYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKKLPKEMLINLFNSLETTSAIC 736

Query: 49  GICDEPVEDPVVTSCEHVFCNACLVDFSASMDPVLCPS 86
            +C++P +D V++ C HVFC  C+ +   S D  +CP+
Sbjct: 737 CVCNDPPDDSVISMCGHVFCYQCVSEHLTS-DDNMCPA 773


>Medtr2g012830.1 | SNF2, helicase and zinc finger protein | HC |
            chr2:3311076-3321817 | 20130731
          Length = 1303

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 14/84 (16%)

Query: 3    HYADIFGLLTKLRQAVDHPYLVVYSKPEALKGGGVAASDGTVEQ--------------VC 48
            +Y +I  +L +LRQA DHP LV       L    V  +     +              +C
Sbjct: 933  NYVNILLMLLRLRQACDHPLLVKRYNSTTLWKSSVETAMKLPREKQLFLLKCLEASLALC 992

Query: 49   GICDEPVEDPVVTSCEHVFCNACL 72
            GIC++  E+ VV+ C HVFCN C+
Sbjct: 993  GICNDAPEEAVVSVCGHVFCNQCI 1016


>Medtr2g084630.2 | DNA/RNA helicase | HC | chr2:35865773-35875405 |
           20130731
          Length = 1025

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 31/118 (26%)

Query: 1   MNHYADIFGLLTKLRQAVDHPYLVVYSK-----------PEALKGGGVAASDGTVEQV-- 47
           +++YA I  LL +LRQ  DHP+LV+               +    G   AS+G V+    
Sbjct: 703 LHNYASILELLLRLRQCCDHPFLVMSRGDTQEFADLNKLAKRFLRGTCNASEGEVKDALS 762

Query: 48  ------------------CGICDEPVEDPVVTSCEHVFCNACLVDFSASMDPVLCPSC 87
                             C IC E  ED V+T C H  C  CL+    +    LCP C
Sbjct: 763 RAYVQEVVEELRKGEQGECPICLEAFEDSVLTPCAHRLCRECLLASWRNSTSGLCPVC 820


>Medtr2g084630.1 | DNA/RNA helicase | HC | chr2:35865804-35875314 |
           20130731
          Length = 1022

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 31/118 (26%)

Query: 1   MNHYADIFGLLTKLRQAVDHPYLVVYSK-----------PEALKGGGVAASDGTVEQV-- 47
           +++YA I  LL +LRQ  DHP+LV+               +    G   AS+G V+    
Sbjct: 709 LHNYASILELLLRLRQCCDHPFLVMSRGDTQEFADLNKLAKRFLRGTCNASEGEVKDALS 768

Query: 48  ------------------CGICDEPVEDPVVTSCEHVFCNACLVDFSASMDPVLCPSC 87
                             C IC E  ED V+T C H  C  CL+    +    LCP C
Sbjct: 769 RAYVQEVVEELRKGEQGECPICLEAFEDSVLTPCAHRLCRECLLASWRNSTSGLCPVC 826