Miyakogusa Predicted Gene

Lj3g3v2908680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2908680.1 Non Characterized Hit- tr|I1LRP6|I1LRP6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13963 PE,84.77,0,PDZ
domain-like,PDZ domain; no description,NULL; Peptidase_M50,Peptidase
M50; PDZ_2,PDZ domain; PROT,CUFF.44952.1
         (453 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g048590.1 | RIP metalloprotease RseP | HC | chr4:17254152-...   598   e-171

>Medtr4g048590.1 | RIP metalloprotease RseP | HC |
           chr4:17254152-17252223 | 20130731
          Length = 448

 Score =  598 bits (1543), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 329/454 (72%), Positives = 358/454 (78%), Gaps = 7/454 (1%)

Query: 1   MVINLXXXXXXXXXXIIRFANSKSPISESSFKFKTHFSKPLLSPSFASPNVKSFACKKRF 60
           MVI L          IIR +NSK PIS+SS   KTHFSK L S SF S NVK    KK+F
Sbjct: 1   MVIYLSPSPPSHSTPIIRLSNSKRPISDSSISLKTHFSKSLFSSSFTSSNVK-LTTKKQF 59

Query: 61  LHDNSRFTHGNRVDFRTW-AIAGFDYGSFEGPQSVLEAAAVLTAIIVVHETGHFLAASLQ 119
           LH N R    NRV FRT  AI GFDYGSFEGPQSVLEAAAVLTAIIVVHE+GHFLAASLQ
Sbjct: 60  LH-NKR----NRVGFRTCRAIGGFDYGSFEGPQSVLEAAAVLTAIIVVHESGHFLAASLQ 114

Query: 120 GIRVSKFAVGFGPILAKFNANNVEYSIRAFPLGGFVGFXXXXXXXXXXXXXXXLLKNRPI 179
           GI VSKFAVGFGPILAKFNA NVEYSIRAFPLGGFVGF               LLKNRPI
Sbjct: 115 GIHVSKFAVGFGPILAKFNAKNVEYSIRAFPLGGFVGFPDNDPDSDIPVDDVNLLKNRPI 174

Query: 180 LDRVIVVSAGVIANIVFALVIIFVQILAVGLPVQEVFPGVSVPEVRPFSAASRDGLLSGD 239
           LDR+IVVSAGVIAN++FA+VIIFVQILAVGLPVQE+FPGV+VPEVRPFSAASRDGLLSGD
Sbjct: 175 LDRIIVVSAGVIANVIFAIVIIFVQILAVGLPVQEIFPGVNVPEVRPFSAASRDGLLSGD 234

Query: 240 VIVEVNGNEFVKQGPSAVSEVVDVIKRNPKRYVLLKVKRGEQNFDIGVTPDENFDGTGKI 299
           VI+EVNGN+F+K GP++VSEVVDVIK +PK+YVLLKVKRG +NF+I VTPDENFDGTGKI
Sbjct: 235 VILEVNGNQFLKPGPNSVSEVVDVIKSSPKKYVLLKVKRGGENFEIRVTPDENFDGTGKI 294

Query: 300 GVQLSPNVKLDKVKPKNVVDAFSFTAKEFWGLSSNVLDGLRQTFLNFSQSASKVSGPVAI 359
           GVQL+PN+KL KV+PKNVV+A +FTAKEFWGLSSNV DGL+QTFLNFSQ+ASKVSGPVAI
Sbjct: 295 GVQLAPNIKLSKVRPKNVVEAVTFTAKEFWGLSSNVFDGLKQTFLNFSQTASKVSGPVAI 354

Query: 360 IAVGAEVARSNIDGLYQFXXXXXXXXXXXXXXXXXXXDGGSLALILVEAARGGRKLPLEV 419
           IAVGAEVARSNIDGLYQF                   DGG+LALILVEAARGGRKLP+EV
Sbjct: 355 IAVGAEVARSNIDGLYQFAAILNINLAIINLLPLPALDGGTLALILVEAARGGRKLPMEV 414

Query: 420 EQRIXXXXXXXXXXXXXXXXXRDTLNLDFIKEML 453
           EQRI                 RDTLNLDF KE+L
Sbjct: 415 EQRIMSSGIMLVLLLGLYLIIRDTLNLDFFKEIL 448