Miyakogusa Predicted Gene
- Lj3g3v2908390.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2908390.1 Non Characterized Hit- tr|I1KFD3|I1KFD3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,74.07,0,DNA_pol_A_exo1,3'-5' exonuclease domain;
HRDC,Helicase/RNase D C-terminal, HRDC domain; seg,NULL;
no,CUFF.45036.1
(911 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g048230.1 | 3'-5' exonuclease domain protein | HC | chr4:1... 1310 0.0
Medtr4g048230.2 | 3'-5' exonuclease domain protein | HC | chr4:1... 1279 0.0
Medtr7g086370.2 | 3'-5' exonuclease | HC | chr7:33513450-3352415... 219 1e-56
Medtr7g086370.1 | 3'-5' exonuclease | HC | chr7:33513431-3352415... 219 1e-56
Medtr6g027760.1 | exosome complex exonuclease RRP6 | HC | chr6:9... 206 7e-53
Medtr6g027760.2 | exosome complex exonuclease RRP6 | HC | chr6:9... 205 2e-52
Medtr7g086370.3 | 3'-5' exonuclease | HC | chr7:33513421-3352172... 194 5e-49
Medtr1g016970.1 | 3'-5' exonuclease | HC | chr1:4575701-4582988 ... 51 6e-06
Medtr1g016970.3 | 3'-5' exonuclease | HC | chr1:4575701-4582988 ... 51 6e-06
Medtr1g016970.5 | 3'-5' exonuclease | HC | chr1:4575701-4582988 ... 51 6e-06
>Medtr4g048230.1 | 3'-5' exonuclease domain protein | HC |
chr4:17080440-17072522 | 20130731
Length = 930
Score = 1310 bits (3391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/888 (74%), Positives = 738/888 (83%), Gaps = 30/888 (3%)
Query: 49 ERKPKCAFKRVLADNSYAPFKHLSLN----DENGSDLHPFEAEITALVRSPQPEIELSDD 104
E KP+ AFKRVLADNSYAPFKHLS N + NGS LHPF+AEITAL+++ QPEIEL +
Sbjct: 47 EPKPQSAFKRVLADNSYAPFKHLSFNASKNNGNGSSLHPFQAEITALLQNHQPEIELGAE 106
Query: 105 FEVVDLETNDSYVWVDTEVLLKELVNELSKEKFFAVDTEQHSLHSFLGFTALVQISTQKK 164
LE NDSYVWVDTE+ LK+LVN LSKEKFF VDTEQHSL SFLGFT LVQISTQ++
Sbjct: 107 ----KLEMNDSYVWVDTEMQLKKLVNVLSKEKFFGVDTEQHSLRSFLGFTGLVQISTQQE 162
Query: 165 DYLVDTIALHDSMGILRPVFANPSICKVFHGADNDILWLQRDFHIYVVNLFDTSKACEVL 224
DYL+DTIALHDSM ILRPVFA+PSICKVFHGADND+LWLQRDFHIYVVNLFDTSKACEVL
Sbjct: 163 DYLIDTIALHDSMEILRPVFADPSICKVFHGADNDVLWLQRDFHIYVVNLFDTSKACEVL 222
Query: 225 SKPQKSLAYLLETYCGVVTNKLLQREDWRQRPLSAEMLHYALTDAHYLLYIANCMINELR 284
SKPQKSLAYLLETYCGV TNKLLQREDWRQRPLSAEM+HYA TDAHYLLYIANC+I+EL+
Sbjct: 223 SKPQKSLAYLLETYCGVNTNKLLQREDWRQRPLSAEMVHYARTDAHYLLYIANCLIDELK 282
Query: 285 QLDNENSGSDDKIQFVLEACRRSNMICLQLFTKDIEASPGESSVLSLFSRHVSSQDVPSI 344
QLDNENS SDDK FVLEA RRSNMICLQLFTK+IEASPGES+ LSL+SRH S++ PSI
Sbjct: 283 QLDNENSCSDDKFHFVLEASRRSNMICLQLFTKEIEASPGESAALSLYSRHQSNRASPSI 342
Query: 345 SNETQFQHTVRQLCTWRDLMARIHDESLKYVLSDQAIGALASQPPATHTEIYKTIARTDI 404
SNETQF VRQLCTWRDLMARIHDESLKYVLSDQAI ALAS+ PA+++EIY +I +TD+
Sbjct: 343 SNETQFLSIVRQLCTWRDLMARIHDESLKYVLSDQAIVALASRLPASNSEIYNSIVQTDV 402
Query: 405 NFEMGLNXXXXXXXXXXCSHLNDIYDLLANKLVNRGDIYSVIIQKCLGQNGICQLSIFNY 464
N E GL+ CSHL DI LLANKLVN GDIYSVI+QKCLGQNG C+L+I NY
Sbjct: 403 NAETGLSSSIPSPSPVVCSHLTDICHLLANKLVNHGDIYSVILQKCLGQNGNCKLNISNY 462
Query: 465 ALLVNGSPRPTSVHKHSRLKNLKQFSRKASRDLFVQKFSCKAPVYHNCRIYANDGRLLCY 524
ALLVN + RPT K S LKN +Q S+KASR+LFV+KFSCK+PVYHNCRI+ANDGRLLCY
Sbjct: 463 ALLVNCNVRPTLSSKRSSLKNPRQHSKKASRNLFVKKFSCKSPVYHNCRIFANDGRLLCY 522
Query: 525 CDRKKLEWYLSRDLAKLVDDDPPGIMLLFEPKGRPEDEDNDFYIQSKKNICVGCGEGNHY 584
CDRKKLEWYLSRDLAK+VD++PP IMLLFEPKGRPEDE NDFYIQSKKNICVGCGEGNHY
Sbjct: 523 CDRKKLEWYLSRDLAKVVDEEPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHY 582
Query: 585 LRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEIAHAAAEKYKRKIAAEYGIPLYVRS 644
LRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE AHAAAEKYKRK+A+E+GIPLYVR
Sbjct: 583 LRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEAAHAAAEKYKRKVASEFGIPLYVRR 642
Query: 645 VIHPREKNEEQTEEGGVSPLQLRTAAMALLRHGPRMPLDRREELTEIVKRYYGGREITEE 704
VIHP ++ E+ +EGGVSPLQLR+AA+ALLRHGPRMP DRREELTEI+K YYGGREI++E
Sbjct: 643 VIHPGQETEKPNDEGGVSPLQLRSAAVALLRHGPRMPHDRREELTEIIKTYYGGREISKE 702
Query: 705 DLEGALQVGMTPQERRRFEKKRGFSFKHSTESTAAVPQLENHVGCAPG--DEDALNDDAH 762
DLE ALQVGMTP ERR+FEKKRG S KHST S +AVP N APG + D L D
Sbjct: 703 DLEKALQVGMTPHERRKFEKKRGVSSKHSTGSASAVPYEGNDTDYAPGMSNGDTLKVDTL 762
Query: 763 DGELLME--------KDDLGNPLLASDLAVDAAISNG----------DYNEGGNSL-NVD 803
DG + E +DD G P LASDLAVD A SNG D +E SL + D
Sbjct: 763 DGSYVNEETRSGDNRQDDSGKPSLASDLAVDKATSNGNTIVVKTTDHDDDETSYSLVDTD 822
Query: 804 NSLSRTLPNGVSDLFDPSKYEESTLAKHNSKLSLLGHGPHGNLVVEHLLKEFGEEGIGEF 863
SL++ PN VSD + K E++T AKH+SKLSLLGHGPHG VV+HLLKE+GE+GI EF
Sbjct: 823 ESLNKMQPNVVSDE-ESIKDEDTTQAKHHSKLSLLGHGPHGKQVVDHLLKEYGEDGIREF 881
Query: 864 CQRWRQVFVDAVNPRFLPGGWDVKHSGRREFGKFSVYNTDKRVDAVSM 911
CQRWRQVFVDA+ PRFLPGGWDVKHSGRR+FG+FSVYN KR A SM
Sbjct: 882 CQRWRQVFVDALKPRFLPGGWDVKHSGRRDFGEFSVYNHQKRETADSM 929
>Medtr4g048230.2 | 3'-5' exonuclease domain protein | HC |
chr4:17080472-17072108 | 20130731
Length = 908
Score = 1279 bits (3310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/865 (74%), Positives = 720/865 (83%), Gaps = 30/865 (3%)
Query: 49 ERKPKCAFKRVLADNSYAPFKHLSLN----DENGSDLHPFEAEITALVRSPQPEIELSDD 104
E KP+ AFKRVLADNSYAPFKHLS N + NGS LHPF+AEITAL+++ QPEIEL +
Sbjct: 47 EPKPQSAFKRVLADNSYAPFKHLSFNASKNNGNGSSLHPFQAEITALLQNHQPEIELGAE 106
Query: 105 FEVVDLETNDSYVWVDTEVLLKELVNELSKEKFFAVDTEQHSLHSFLGFTALVQISTQKK 164
LE NDSYVWVDTE+ LK+LVN LSKEKFF VDTEQHSL SFLGFT LVQISTQ++
Sbjct: 107 ----KLEMNDSYVWVDTEMQLKKLVNVLSKEKFFGVDTEQHSLRSFLGFTGLVQISTQQE 162
Query: 165 DYLVDTIALHDSMGILRPVFANPSICKVFHGADNDILWLQRDFHIYVVNLFDTSKACEVL 224
DYL+DTIALHDSM ILRPVFA+PSICKVFHGADND+LWLQRDFHIYVVNLFDTSKACEVL
Sbjct: 163 DYLIDTIALHDSMEILRPVFADPSICKVFHGADNDVLWLQRDFHIYVVNLFDTSKACEVL 222
Query: 225 SKPQKSLAYLLETYCGVVTNKLLQREDWRQRPLSAEMLHYALTDAHYLLYIANCMINELR 284
SKPQKSLAYLLETYCGV TNKLLQREDWRQRPLSAEM+HYA TDAHYLLYIANC+I+EL+
Sbjct: 223 SKPQKSLAYLLETYCGVNTNKLLQREDWRQRPLSAEMVHYARTDAHYLLYIANCLIDELK 282
Query: 285 QLDNENSGSDDKIQFVLEACRRSNMICLQLFTKDIEASPGESSVLSLFSRHVSSQDVPSI 344
QLDNENS SDDK FVLEA RRSNMICLQLFTK+IEASPGES+ LSL+SRH S++ PSI
Sbjct: 283 QLDNENSCSDDKFHFVLEASRRSNMICLQLFTKEIEASPGESAALSLYSRHQSNRASPSI 342
Query: 345 SNETQFQHTVRQLCTWRDLMARIHDESLKYVLSDQAIGALASQPPATHTEIYKTIARTDI 404
SNETQF VRQLCTWRDLMARIHDESLKYVLSDQAI ALAS+ PA+++EIY +I +TD+
Sbjct: 343 SNETQFLSIVRQLCTWRDLMARIHDESLKYVLSDQAIVALASRLPASNSEIYNSIVQTDV 402
Query: 405 NFEMGLNXXXXXXXXXXCSHLNDIYDLLANKLVNRGDIYSVIIQKCLGQNGICQLSIFNY 464
N E GL+ CSHL DI LLANKLVN GDIYSVI+QKCLGQNG C+L+I NY
Sbjct: 403 NAETGLSSSIPSPSPVVCSHLTDICHLLANKLVNHGDIYSVILQKCLGQNGNCKLNISNY 462
Query: 465 ALLVNGSPRPTSVHKHSRLKNLKQFSRKASRDLFVQKFSCKAPVYHNCRIYANDGRLLCY 524
ALLVN + RPT K S LKN +Q S+KASR+LFV+KFSCK+PVYHNCRI+ANDGRLLCY
Sbjct: 463 ALLVNCNVRPTLSSKRSSLKNPRQHSKKASRNLFVKKFSCKSPVYHNCRIFANDGRLLCY 522
Query: 525 CDRKKLEWYLSRDLAKLVDDDPPGIMLLFEPKGRPEDEDNDFYIQSKKNICVGCGEGNHY 584
CDRKKLEWYLSRDLAK+VD++PP IMLLFEPKGRPEDE NDFYIQSKKNICVGCGEGNHY
Sbjct: 523 CDRKKLEWYLSRDLAKVVDEEPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHY 582
Query: 585 LRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEIAHAAAEKYKRKIAAEYGIPLYVRS 644
LRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE AHAAAEKYKRK+A+E+GIPLYVR
Sbjct: 583 LRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEAAHAAAEKYKRKVASEFGIPLYVRR 642
Query: 645 VIHPREKNEEQTEEGGVSPLQLRTAAMALLRHGPRMPLDRREELTEIVKRYYGGREITEE 704
VIHP ++ E+ +EGGVSPLQLR+AA+ALLRHGPRMP DRREELTEI+K YYGGREI++E
Sbjct: 643 VIHPGQETEKPNDEGGVSPLQLRSAAVALLRHGPRMPHDRREELTEIIKTYYGGREISKE 702
Query: 705 DLEGALQVGMTPQERRRFEKKRGFSFKHSTESTAAVPQLENHVGCAPG--DEDALNDDAH 762
DLE ALQVGMTP ERR+FEKKRG S KHST S +AVP N APG + D L D
Sbjct: 703 DLEKALQVGMTPHERRKFEKKRGVSSKHSTGSASAVPYEGNDTDYAPGMSNGDTLKVDTL 762
Query: 763 DGELLME--------KDDLGNPLLASDLAVDAAISNG----------DYNEGGNSL-NVD 803
DG + E +DD G P LASDLAVD A SNG D +E SL + D
Sbjct: 763 DGSYVNEETRSGDNRQDDSGKPSLASDLAVDKATSNGNTIVVKTTDHDDDETSYSLVDTD 822
Query: 804 NSLSRTLPNGVSDLFDPSKYEESTLAKHNSKLSLLGHGPHGNLVVEHLLKEFGEEGIGEF 863
SL++ PN VSD + K E++T AKH+SKLSLLGHGPHG VV+HLLKE+GE+GI EF
Sbjct: 823 ESLNKMQPNVVSDE-ESIKDEDTTQAKHHSKLSLLGHGPHGKQVVDHLLKEYGEDGIREF 881
Query: 864 CQRWRQVFVDAVNPRFLPGGWDVKH 888
CQRWRQVFVDA+ PRFLPGGWDVKH
Sbjct: 882 CQRWRQVFVDALKPRFLPGGWDVKH 906
>Medtr7g086370.2 | 3'-5' exonuclease | HC | chr7:33513450-33524154 |
20130731
Length = 598
Score = 219 bits (557), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 196/373 (52%), Gaps = 41/373 (10%)
Query: 43 SCYSHSERKPKCAFKRVLADNSYAPFKHLSLNDENGSD----LHPFEA----------EI 88
S + H+ RKP+ + + DNS PF+H+ L E D +HP E I
Sbjct: 135 SFHVHTLRKPQYHYN-LAVDNSNQPFEHVWLEKEKTEDGERFIHPLEYYSVLDFVDKNSI 193
Query: 89 TALVRSPQPEIELSDDFEVVDLETNDSYVWVDTEVLLKELVNELSKEKFFAVDTEQHSLH 148
+LV P +E + V D++ LKEL +LS FAVD E +
Sbjct: 194 ESLVPVKPPPLEFTPFKLVEDVKG------------LKELAAKLSLVDEFAVDLEHNQYR 241
Query: 149 SFLGFTALVQISTQKKDYLVDTIALHDSMGI-LRPVFANPSICKVFHGADNDILWLQRDF 207
SF G T L+QIST+ +D++VDT+ L D +G LR VF +P+ KV HGAD DI+WLQRDF
Sbjct: 242 SFQGLTCLMQISTRTEDFIVDTLKLRDHVGKHLRDVFMDPTKKKVLHGADRDIVWLQRDF 301
Query: 208 HIYVVNLFDTSKACEVLSKPQKSLAYLLETYCGVVTNKLLQREDWRQRPLSAEMLHYALT 267
IY+ N+FDT +A VL + SL +LL+ +CGV NK Q DWR RPL M+ Y
Sbjct: 302 GIYICNMFDTGQASRVLKMERYSLQHLLQHFCGVTANKEYQNADWRARPLPDVMIKYGRE 361
Query: 268 DAHYLLYIANCMINELRQLDNENSGSDDKIQFVLEACRRSNMICLQLFTKDIEASPGESS 327
D HYLLYI + M +L +L E+ DD + LE +RS +C+QL+ KD+ +
Sbjct: 362 DTHYLLYIYDLMRIKLFELSKESESPDDPL---LEVYQRSYNVCMQLYEKDLLTENSFLN 418
Query: 328 VLSLFSRHVSSQDVPSISNETQFQHTVRQLCTWRDLMARIHDESLKYVLSDQAIGALASQ 387
+ L + Q + +S L WRD++AR DES Y+L ++ I +A
Sbjct: 419 IKGLRGAGFNGQQLAVVSG----------LYEWRDVLARAEDESTGYILPNKVILLIAKH 468
Query: 388 PPATHTEIYKTIA 400
P T + + + IA
Sbjct: 469 MPVTASNLRRLIA 481
>Medtr7g086370.1 | 3'-5' exonuclease | HC | chr7:33513431-33524154 |
20130731
Length = 693
Score = 219 bits (557), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 196/373 (52%), Gaps = 41/373 (10%)
Query: 43 SCYSHSERKPKCAFKRVLADNSYAPFKHLSLNDENGSD----LHPFE----------AEI 88
S + H+ RKP+ + + DNS PF+H+ L E D +HP E I
Sbjct: 135 SFHVHTLRKPQYHYN-LAVDNSNQPFEHVWLEKEKTEDGERFIHPLEYYSVLDFVDKNSI 193
Query: 89 TALVRSPQPEIELSDDFEVVDLETNDSYVWVDTEVLLKELVNELSKEKFFAVDTEQHSLH 148
+LV P +E + V D++ LKEL +LS FAVD E +
Sbjct: 194 ESLVPVKPPPLEFTPFKLVEDVKG------------LKELAAKLSLVDEFAVDLEHNQYR 241
Query: 149 SFLGFTALVQISTQKKDYLVDTIALHDSMGI-LRPVFANPSICKVFHGADNDILWLQRDF 207
SF G T L+QIST+ +D++VDT+ L D +G LR VF +P+ KV HGAD DI+WLQRDF
Sbjct: 242 SFQGLTCLMQISTRTEDFIVDTLKLRDHVGKHLRDVFMDPTKKKVLHGADRDIVWLQRDF 301
Query: 208 HIYVVNLFDTSKACEVLSKPQKSLAYLLETYCGVVTNKLLQREDWRQRPLSAEMLHYALT 267
IY+ N+FDT +A VL + SL +LL+ +CGV NK Q DWR RPL M+ Y
Sbjct: 302 GIYICNMFDTGQASRVLKMERYSLQHLLQHFCGVTANKEYQNADWRARPLPDVMIKYGRE 361
Query: 268 DAHYLLYIANCMINELRQLDNENSGSDDKIQFVLEACRRSNMICLQLFTKDIEASPGESS 327
D HYLLYI + M +L +L E+ DD + LE +RS +C+QL+ KD+ +
Sbjct: 362 DTHYLLYIYDLMRIKLFELSKESESPDDPL---LEVYQRSYNVCMQLYEKDLLTENSFLN 418
Query: 328 VLSLFSRHVSSQDVPSISNETQFQHTVRQLCTWRDLMARIHDESLKYVLSDQAIGALASQ 387
+ L + Q + +S L WRD++AR DES Y+L ++ I +A
Sbjct: 419 IKGLRGAGFNGQQLAVVSG----------LYEWRDVLARAEDESTGYILPNKVILLIAKH 468
Query: 388 PPATHTEIYKTIA 400
P T + + + IA
Sbjct: 469 MPVTASNLRRLIA 481
>Medtr6g027760.1 | exosome complex exonuclease RRP6 | HC |
chr6:9716121-9707250 | 20130731
Length = 882
Score = 206 bits (525), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 195/362 (53%), Gaps = 38/362 (10%)
Query: 50 RKPKCAFKRVLADNSYAPFKHLSL--NDENGSDLHPFEA---------EITALVRSPQPE 98
R+P+ F ++ +N+ PF+H+ L +D+ +HP E + +V P
Sbjct: 195 RRPQDEFS-IIVNNANVPFEHVWLQRSDDGQKFVHPLEKLSVLDFVDKDPENIVPQKPPS 253
Query: 99 IELSDDFEVVDLETNDSYVWVDTEVLLKELVNELSKEKFFAVDTEQHSLHSFLGFTALVQ 158
+E S F++V+ E D LKE+ +L FAVD E + SF G T L+Q
Sbjct: 254 LE-STPFKLVE-EVKD----------LKEMAAKLRSVNEFAVDLEHNQYRSFQGLTCLMQ 301
Query: 159 ISTQKKDYLVDTIALHDSMGI-LRPVFANPSICKVFHGADNDILWLQRDFHIYVVNLFDT 217
IST+ +D++VDT+ L +G LR VF +PS KV HGAD DI+WLQRDF IYV N+FDT
Sbjct: 302 ISTRTEDFVVDTLKLRIHIGPHLREVFKDPSKRKVMHGADKDIVWLQRDFGIYVCNMFDT 361
Query: 218 SKACEVLSKPQKSLAYLLETYCGVVTNKLLQREDWRQRPLSAEMLHYALTDAHYLLYIAN 277
+A +VL + SL +LL +C + NK Q DWR RP+ EML YA D HYLLYI +
Sbjct: 362 GQASKVLKLERNSLEHLLNHFCEITANKEYQNADWRLRPIPDEMLRYAREDTHYLLYIYD 421
Query: 278 CMINELRQLDNENSGSDDKIQFVLEACRRSNMICLQLFTKDIEASPGESSVLSLFSRHVS 337
M L L SD + +E +RS +C+QL+ K++ E+S L ++ +
Sbjct: 422 TMRINLCSLPKAPESSDTPL---VEVYKRSYDVCMQLYEKELLT---ENSYLHIYGLQGA 475
Query: 338 SQDVPSISNETQFQHTVRQLCTWRDLMARIHDESLKYVLSDQAIGALASQPPATHTEIYK 397
+ ++ V LC WRD++AR DES YVL ++ + +A Q P T ++ +
Sbjct: 476 GFNAQQLA-------IVSGLCEWRDIVARAEDESTGYVLPNKTVLEIAKQMPVTTNKLRR 528
Query: 398 TI 399
+
Sbjct: 529 LV 530
>Medtr6g027760.2 | exosome complex exonuclease RRP6 | HC |
chr6:9716121-9707250 | 20130731
Length = 651
Score = 205 bits (521), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 195/362 (53%), Gaps = 38/362 (10%)
Query: 50 RKPKCAFKRVLADNSYAPFKHLSL--NDENGSDLHPFEA---------EITALVRSPQPE 98
R+P+ F ++ +N+ PF+H+ L +D+ +HP E + +V P
Sbjct: 195 RRPQDEFS-IIVNNANVPFEHVWLQRSDDGQKFVHPLEKLSVLDFVDKDPENIVPQKPPS 253
Query: 99 IELSDDFEVVDLETNDSYVWVDTEVLLKELVNELSKEKFFAVDTEQHSLHSFLGFTALVQ 158
+E S F++V+ E D LKE+ +L FAVD E + SF G T L+Q
Sbjct: 254 LE-STPFKLVE-EVKD----------LKEMAAKLRSVNEFAVDLEHNQYRSFQGLTCLMQ 301
Query: 159 ISTQKKDYLVDTIALHDSMGI-LRPVFANPSICKVFHGADNDILWLQRDFHIYVVNLFDT 217
IST+ +D++VDT+ L +G LR VF +PS KV HGAD DI+WLQRDF IYV N+FDT
Sbjct: 302 ISTRTEDFVVDTLKLRIHIGPHLREVFKDPSKRKVMHGADKDIVWLQRDFGIYVCNMFDT 361
Query: 218 SKACEVLSKPQKSLAYLLETYCGVVTNKLLQREDWRQRPLSAEMLHYALTDAHYLLYIAN 277
+A +VL + SL +LL +C + NK Q DWR RP+ EML YA D HYLLYI +
Sbjct: 362 GQASKVLKLERNSLEHLLNHFCEITANKEYQNADWRLRPIPDEMLRYAREDTHYLLYIYD 421
Query: 278 CMINELRQLDNENSGSDDKIQFVLEACRRSNMICLQLFTKDIEASPGESSVLSLFSRHVS 337
M L L SD + +E +RS +C+QL+ K++ E+S L ++ +
Sbjct: 422 TMRINLCSLPKAPESSDTPL---VEVYKRSYDVCMQLYEKELLT---ENSYLHIYGLQGA 475
Query: 338 SQDVPSISNETQFQHTVRQLCTWRDLMARIHDESLKYVLSDQAIGALASQPPATHTEIYK 397
+ ++ V LC WRD++AR DES YVL ++ + +A Q P T ++ +
Sbjct: 476 GFNAQQLA-------IVSGLCEWRDIVARAEDESTGYVLPNKTVLEIAKQMPVTTNKLRR 528
Query: 398 TI 399
+
Sbjct: 529 LV 530
>Medtr7g086370.3 | 3'-5' exonuclease | HC | chr7:33513421-33521721 |
20130731
Length = 438
Score = 194 bits (492), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 162/292 (55%), Gaps = 31/292 (10%)
Query: 43 SCYSHSERKPKCAFKRVLADNSYAPFKHLSLNDENGSD----LHPFEA----------EI 88
S + H+ RKP+ + + DNS PF+H+ L E D +HP E I
Sbjct: 135 SFHVHTLRKPQYHYN-LAVDNSNQPFEHVWLEKEKTEDGERFIHPLEYYSVLDFVDKNSI 193
Query: 89 TALVRSPQPEIELSDDFEVVDLETNDSYVWVDTEVLLKELVNELSKEKFFAVDTEQHSLH 148
+LV P +E + V D++ LKEL +LS FAVD E +
Sbjct: 194 ESLVPVKPPPLEFTPFKLVEDVKG------------LKELAAKLSLVDEFAVDLEHNQYR 241
Query: 149 SFLGFTALVQISTQKKDYLVDTIALHDSMGI-LRPVFANPSICKVFHGADNDILWLQRDF 207
SF G T L+QIST+ +D++VDT+ L D +G LR VF +P+ KV HGAD DI+WLQRDF
Sbjct: 242 SFQGLTCLMQISTRTEDFIVDTLKLRDHVGKHLRDVFMDPTKKKVLHGADRDIVWLQRDF 301
Query: 208 HIYVVNLFDTSKACEVLSKPQKSLAYLLETYCGVVTNKLLQREDWRQRPLSAEMLHYALT 267
IY+ N+FDT +A VL + SL +LL+ +CGV NK Q DWR RPL M+ Y
Sbjct: 302 GIYICNMFDTGQASRVLKMERYSLQHLLQHFCGVTANKEYQNADWRARPLPDVMIKYGRE 361
Query: 268 DAHYLLYIANCMINELRQLDNENSGSDDKIQFVLEACRRSNMICLQLFTKDI 319
D HYLLYI + M +L +L E+ DD + LE +RS +C+QL+ KD+
Sbjct: 362 DTHYLLYIYDLMRIKLFELSKESESPDDPL---LEVYQRSYNVCMQLYEKDL 410
>Medtr1g016970.1 | 3'-5' exonuclease | HC | chr1:4575701-4582988 |
20130731
Length = 352
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 152 GFTALVQISTQKKDYLVDTIALHDSM-GILRPVFANPSICKVFHGADNDILWLQRDFHIY 210
G ++Q++ YLVD I + +P + + KV H D L F I
Sbjct: 83 GALCIIQLAFPDAIYLVDAIEGGSVLIEACKPALESDYVTKVIHDCKRDSEALYFQFGIK 142
Query: 211 VVNLFDTSKACEVLSKPQK---------SLAYLLET--YCGVVTN-----KLLQRED--- 251
+ N+ DT A +L + + SL LL YCG+ ++L R+D
Sbjct: 143 LNNVVDTQIAYSLLEEQEGQRRLPDDYISLVGLLADPRYCGLSNVDKEEVRVLLRQDPNF 202
Query: 252 WRQRPLSAEMLHYALTDAHYLLYIANCMINELRQ 285
W RPLS +M+H A D +LLYI + M+ +L +
Sbjct: 203 WTYRPLSEQMIHSAADDVRFLLYIYHQMMAKLTE 236
>Medtr1g016970.3 | 3'-5' exonuclease | HC | chr1:4575701-4582988 |
20130731
Length = 352
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 152 GFTALVQISTQKKDYLVDTIALHDSM-GILRPVFANPSICKVFHGADNDILWLQRDFHIY 210
G ++Q++ YLVD I + +P + + KV H D L F I
Sbjct: 83 GALCIIQLAFPDAIYLVDAIEGGSVLIEACKPALESDYVTKVIHDCKRDSEALYFQFGIK 142
Query: 211 VVNLFDTSKACEVLSKPQK---------SLAYLLET--YCGVVTN-----KLLQRED--- 251
+ N+ DT A +L + + SL LL YCG+ ++L R+D
Sbjct: 143 LNNVVDTQIAYSLLEEQEGQRRLPDDYISLVGLLADPRYCGLSNVDKEEVRVLLRQDPNF 202
Query: 252 WRQRPLSAEMLHYALTDAHYLLYIANCMINELRQ 285
W RPLS +M+H A D +LLYI + M+ +L +
Sbjct: 203 WTYRPLSEQMIHSAADDVRFLLYIYHQMMAKLTE 236
>Medtr1g016970.5 | 3'-5' exonuclease | HC | chr1:4575701-4582988 |
20130731
Length = 314
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 152 GFTALVQISTQKKDYLVDTIALHDSM-GILRPVFANPSICKVFHGADNDILWLQRDFHIY 210
G ++Q++ YLVD I + +P + + KV H D L F I
Sbjct: 83 GALCIIQLAFPDAIYLVDAIEGGSVLIEACKPALESDYVTKVIHDCKRDSEALYFQFGIK 142
Query: 211 VVNLFDTSKACEVLSKPQK---------SLAYLLET--YCGVVTN-----KLLQRED--- 251
+ N+ DT A +L + + SL LL YCG+ ++L R+D
Sbjct: 143 LNNVVDTQIAYSLLEEQEGQRRLPDDYISLVGLLADPRYCGLSNVDKEEVRVLLRQDPNF 202
Query: 252 WRQRPLSAEMLHYALTDAHYLLYIANCMINELRQ 285
W RPLS +M+H A D +LLYI + M+ +L +
Sbjct: 203 WTYRPLSEQMIHSAADDVRFLLYIYHQMMAKLTE 236