Miyakogusa Predicted Gene
- Lj3g3v2903000.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2903000.1 tr|G7JDG8|G7JDG8_MEDTR Septum-promoting
GTP-binding protein OS=Medicago truncatula GN=MTR_4g047870
P,79.43,0,Rab subfamily of small GTPases,Small GTPase superfamily, Rab
type; P-loop containing nucleoside trip,CUFF.44925.1
(281 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g047870.2 | septum-promoting GTP-binding-like protein | HC... 453 e-128
Medtr4g047870.1 | septum-promoting GTP-binding-like protein | HC... 453 e-128
Medtr5g092060.1 | Ras-related small GTP-binding family protein |... 322 2e-88
Medtr4g098950.1 | RAB GTPase-like protein B1C | HC | chr4:408810... 67 1e-11
Medtr5g013900.1 | RAB GTPase-like protein B1C | HC | chr5:458101... 67 2e-11
Medtr3g064390.1 | small GTPase family RAB protein | HC | chr3:28... 65 7e-11
Medtr1g062760.1 | RAB GTPase-like protein A5B | HC | chr1:274958... 65 7e-11
Medtr5g076590.1 | small GTPase family RAB protein | HC | chr5:32... 63 3e-10
Medtr7g103070.1 | RAB GTPase-like protein C2B | HC | chr7:414408... 62 5e-10
Medtr8g103550.1 | RAB GTPase-like protein A5B | HC | chr8:435755... 61 1e-09
Medtr8g090215.1 | RAB GTPase-like protein B1C | HC | chr8:378544... 59 5e-09
Medtr1g090717.1 | RAB GTPase-like protein A5B | HC | chr1:407164... 58 1e-08
Medtr3g069510.1 | RAB GTPase-like protein A1D | HC | chr3:310902... 57 2e-08
Medtr4g064897.1 | RAB GTPase-like protein A1D | HC | chr4:242499... 57 3e-08
Medtr1g068730.1 | RAB GTPase-like protein A5B | HC | chr1:293444... 56 4e-08
Medtr3g087160.1 | RAB GTPase-like protein B1C | HC | chr3:395302... 56 4e-08
Medtr2g005510.1 | RAB GTPase-like protein A1D | HC | chr2:188783... 55 6e-08
Medtr1g068740.1 | RAB GTPase-like protein A5B | HC | chr1:293521... 55 6e-08
Medtr3g086980.1 | RAB GTPase-like protein A1D | HC | chr3:394347... 55 6e-08
Medtr2g096550.1 | RAB GTPase-like protein A1D | HC | chr2:412383... 55 1e-07
Medtr1g052475.1 | RAB GTPase-like protein A1D | HC | chr1:213364... 54 2e-07
Medtr2g005500.1 | RAB GTPase-like protein B1C | HC | chr2:184631... 53 3e-07
Medtr2g083860.1 | RAB GTPase-like protein A1D | HC | chr2:351953... 53 3e-07
Medtr1g078200.1 | RAB GTPase-like protein C2B | HC | chr1:349987... 53 3e-07
Medtr3g064390.2 | small GTPase family RAB protein | HC | chr3:28... 53 3e-07
Medtr7g100020.2 | RAB GTPase-like protein A5B | HC | chr7:401949... 52 5e-07
Medtr7g100020.1 | RAB GTPase-like protein A5B | HC | chr7:401949... 52 5e-07
Medtr8g089985.1 | RAB GTPase-like protein A1D | HC | chr8:376274... 52 5e-07
Medtr1g115325.1 | RAB GTPase-like protein A5B | HC | chr1:520310... 52 8e-07
Medtr8g107070.1 | RAB GTPase-like protein A2D | HC | chr8:452338... 51 9e-07
Medtr0262s0050.1 | RAB GTPase-like protein A1D | HC | scaffold02... 51 1e-06
Medtr2g075950.1 | RAB GTPase-like protein A1D | HC | chr2:317892... 51 1e-06
Medtr4g079350.1 | RAB GTPase-like protein C2B | HC | chr4:306486... 51 1e-06
Medtr1g068730.2 | RAB GTPase-like protein A5B | HC | chr1:293444... 51 1e-06
Medtr3g107707.1 | GTP-binding nuclear Ran-like protein | HC | ch... 51 1e-06
Medtr1g068740.2 | RAB GTPase-like protein A5B | HC | chr1:293521... 51 2e-06
Medtr3g107717.1 | GTP-binding nuclear Ran-like protein | HC | ch... 50 2e-06
Medtr3g107713.1 | GTP-binding nuclear Ran-like protein | HC | ch... 50 2e-06
Medtr1g029450.1 | small GTPase family RAB protein | HC | chr1:10... 50 2e-06
Medtr7g405790.1 | RAB GTPase-like protein A1D | HC | chr7:264041... 50 2e-06
Medtr8g027220.1 | Ras-related small GTP-binding family protein |... 50 2e-06
Medtr8g093740.1 | RAB GTPase-like protein A5B | HC | chr8:392232... 50 2e-06
Medtr8g093740.2 | RAB GTPase-like protein A5B | HC | chr8:392232... 50 2e-06
Medtr4g088090.1 | RAB GTPase-like protein A1D | HC | chr4:346993... 50 2e-06
Medtr7g051940.1 | RAB GTPase-like protein A1D | HC | chr7:182342... 50 3e-06
Medtr2g102060.1 | small GTPase family RAB protein | HC | chr2:43... 50 4e-06
Medtr2g090865.1 | RAB GTPase-like protein A1D | HC | chr2:390019... 49 4e-06
Medtr2g014990.1 | RAB GTPase-like protein A1D | HC | chr2:437551... 49 5e-06
Medtr2g090875.1 | Rho-like GTP-binding protein | HC | chr2:39006... 49 6e-06
Medtr3g096350.1 | small GTPase family RAB protein | HC | chr3:44... 48 9e-06
>Medtr4g047870.2 | septum-promoting GTP-binding-like protein | HC |
chr4:16887358-16882915 | 20130731
Length = 276
Score = 453 bits (1166), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/282 (79%), Positives = 239/282 (84%), Gaps = 7/282 (2%)
Query: 1 MPQLCREVGNSTTLRRRFHHRVSLLRRCILRVLHHFLVCSGRKP-TNAAYRMLHPHVALX 59
M C + G+S LRRR H RVSLLRRCILR LH LVCSG++P NA Y ML PH AL
Sbjct: 1 MSDFCLKNGHSFALRRRLHSRVSLLRRCILRALHRLLVCSGKQPGANATYSMLTPHSALP 60
Query: 60 XXXXXXDFSAVEAGLGGVLVAPPPVFHTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGD 119
S VE + PPVF+T++ ++DLVSLKISLLGDCQIGKTSFLVKYVG+
Sbjct: 61 SPRASLLDSTVETAIQ------PPVFNTNELDTDLVSLKISLLGDCQIGKTSFLVKYVGN 114
Query: 120 EKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLT 179
EKEQG QRKG NQMDKTLVV GARISYCIWEVQGDGK++DQ+P+ACKDSVAILIMFDLT
Sbjct: 115 EKEQGVEQRKGPNQMDKTLVVSGARISYCIWEVQGDGKSEDQLPMACKDSVAILIMFDLT 174
Query: 180 SRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIASEARTYAKALNATL 239
SRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPID+QWTIASEARTYAKALNATL
Sbjct: 175 SRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDMQWTIASEARTYAKALNATL 234
Query: 240 FFSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF 281
FFSSATYNINVNKIFKFITAKLFDLPWTVERNL VGEPIIDF
Sbjct: 235 FFSSATYNINVNKIFKFITAKLFDLPWTVERNLNVGEPIIDF 276
>Medtr4g047870.1 | septum-promoting GTP-binding-like protein | HC |
chr4:16887365-16882931 | 20130731
Length = 276
Score = 453 bits (1166), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/282 (79%), Positives = 239/282 (84%), Gaps = 7/282 (2%)
Query: 1 MPQLCREVGNSTTLRRRFHHRVSLLRRCILRVLHHFLVCSGRKP-TNAAYRMLHPHVALX 59
M C + G+S LRRR H RVSLLRRCILR LH LVCSG++P NA Y ML PH AL
Sbjct: 1 MSDFCLKNGHSFALRRRLHSRVSLLRRCILRALHRLLVCSGKQPGANATYSMLTPHSALP 60
Query: 60 XXXXXXDFSAVEAGLGGVLVAPPPVFHTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGD 119
S VE + PPVF+T++ ++DLVSLKISLLGDCQIGKTSFLVKYVG+
Sbjct: 61 SPRASLLDSTVETAIQ------PPVFNTNELDTDLVSLKISLLGDCQIGKTSFLVKYVGN 114
Query: 120 EKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLT 179
EKEQG QRKG NQMDKTLVV GARISYCIWEVQGDGK++DQ+P+ACKDSVAILIMFDLT
Sbjct: 115 EKEQGVEQRKGPNQMDKTLVVSGARISYCIWEVQGDGKSEDQLPMACKDSVAILIMFDLT 174
Query: 180 SRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIASEARTYAKALNATL 239
SRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPID+QWTIASEARTYAKALNATL
Sbjct: 175 SRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDMQWTIASEARTYAKALNATL 234
Query: 240 FFSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF 281
FFSSATYNINVNKIFKFITAKLFDLPWTVERNL VGEPIIDF
Sbjct: 235 FFSSATYNINVNKIFKFITAKLFDLPWTVERNLNVGEPIIDF 276
>Medtr5g092060.1 | Ras-related small GTP-binding family protein | HC
| chr5:40192617-40189315 | 20130731
Length = 289
Score = 322 bits (825), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/282 (58%), Positives = 207/282 (73%), Gaps = 5/282 (1%)
Query: 1 MPQLCREVGNSTTLRRRFHHRVSLLRRCILRVLHHFLVCS-GRKPTNAAYRMLHPHVALX 59
M QLCR++ ++ RVS + + + + +VCS GR P A YR L + +
Sbjct: 12 MTQLCRKIV-QVDVKYGMLQRVSFVGQFFRFIWNKLMVCSVGRSP--AQYRRLSLNHSSA 68
Query: 60 XXXXXXDFSAVEAGLGGVLVAPPPVFHTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGD 119
S G + ++ +SDLV+LKISLLGDC IGKT+FL+KYVG+
Sbjct: 69 SSSSSLSPSPATVD-DGFTREQQHTNNGYESDSDLVNLKISLLGDCHIGKTTFLIKYVGN 127
Query: 120 EKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLT 179
E E+ LQ +GLN MDKTL V+GARIS+CIW+V GD K+ DQ+P+ACKD+VA+LIMFDLT
Sbjct: 128 EVEKRSLQMEGLNLMDKTLYVQGARISFCIWDVAGDKKSLDQIPMACKDAVALLIMFDLT 187
Query: 180 SRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIASEARTYAKALNATL 239
SR TLN+V+GWY EARKWNQTAIP+LIGTKFDDF++LP DLQWTI ++AR YA+A+ ATL
Sbjct: 188 SRSTLNNVVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIVTQARAYARAMKATL 247
Query: 240 FFSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF 281
FFSSAT+NINVNKIFKFI AKLF+LPWT+ERNL VGEPIIDF
Sbjct: 248 FFSSATHNINVNKIFKFIMAKLFNLPWTIERNLKVGEPIIDF 289
>Medtr4g098950.1 | RAB GTPase-like protein B1C | HC |
chr4:40881047-40875458 | 20130731
Length = 206
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Query: 92 SDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWE 151
S L K+ LGD +GKTS + +++ D+ + G++ + KT+ +E + +W+
Sbjct: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 152 VQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEAR-KWNQTAIPVLIGTKF 210
G + +P +DS +I++D+ SR T + W +E R + I VL+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRSERGSDVIVVLVGNKT 124
Query: 211 DDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
D ++ + E ++ LN +SA N+ +F+ I A L
Sbjct: 125 D-----LVEKRQVSTEEGEAKSRELNVMFIEASAKAGFNIKALFRKIAAAL 170
>Medtr5g013900.1 | RAB GTPase-like protein B1C | HC |
chr5:4581017-4585541 | 20130731
Length = 207
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 6/171 (3%)
Query: 92 SDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWE 151
S L K+ LGD +GKTS + +++ D+ + G++ + KT+ +E + +W+
Sbjct: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 152 VQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEAR-KWNQTAIPVLIGTKF 210
G + +P +DS +I++D+ SR T + W +E R + I VL+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTTKWIEEVRTERGSDVIIVLVGNKT 124
Query: 211 DDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
D + + ++ + A+ LN +SA N+ +F+ I A L
Sbjct: 125 DLVEKRQVSIE-----DGEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>Medtr3g064390.1 | small GTPase family RAB protein | HC |
chr3:28986937-28992404 | 20130731
Length = 200
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 95 VSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQG 154
++ K+ LLGD GK+S ++++V + + + G +TL V A + + IW+ G
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
Query: 155 DGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKW-NQTAIPVLIGTKFDDF 213
+ P+ + + A +I++D+TS + + W +E +K N + L G K D
Sbjct: 69 QERYHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMALAGNKSD-- 126
Query: 214 IQLPIDLQWTIASEARTYAKALNATLFF--SSATYNINVNKIFKFITAKL 261
D + A EAR YA+ LFF +SA NVN +F I +L
Sbjct: 127 ---LEDKRKVTAEEARVYAE--ENGLFFMETSAKSAANVNDVFYEIAKRL 171
>Medtr1g062760.1 | RAB GTPase-like protein A5B | HC |
chr1:27495849-27498608 | 20130731
Length = 211
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 9/182 (4%)
Query: 95 VSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQG 154
+S KI L+GD +GK+S LV ++ E G++ K L V G R+ IW+ G
Sbjct: 13 ISFKILLIGDSAVGKSSLLVSFISGSVED-PAPTIGVDFKIKLLTVGGKRLKLTIWDTAG 71
Query: 155 DGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLG-WYKEARKW--NQTAIPVLIGTKFD 211
+ + + I++++D+T R T ++ W KE + NQ + +L+G K D
Sbjct: 72 QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCMKMLVGNKVD 131
Query: 212 DFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERN 271
+ + + E AK + F SA NV+K F+ + K+ ++P +E
Sbjct: 132 RESERTVSTE-----EGLALAKEFGCSFFECSAKTRENVDKCFEELALKIMEVPSLLEEG 186
Query: 272 LT 273
T
Sbjct: 187 ST 188
>Medtr5g076590.1 | small GTPase family RAB protein | HC |
chr5:32675525-32681053 | 20130731
Length = 200
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 95 VSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQG 154
++ K+ LLGD GK+S ++++V + + + G +TL V A + + IW+ G
Sbjct: 9 LNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68
Query: 155 DGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKW-NQTAIPVLIGTKFDDF 213
+ P+ + + A +I++D+T+ + W +E +K N + G K D
Sbjct: 69 QERYHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKAD-- 126
Query: 214 IQLPIDLQWTIASEARTYAKALNATLFF--SSATYNINVNKIFKFITAKL 261
D + A EAR YA+ LFF +SA NVN IF I KL
Sbjct: 127 ---LEDKRKVTAEEARVYAE--ENGLFFIETSAKTAANVNDIFYEIAKKL 171
>Medtr7g103070.1 | RAB GTPase-like protein C2B | HC |
chr7:41440857-41436532 | 20130731
Length = 214
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 8/178 (4%)
Query: 95 VSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQG 154
+S KI L+GD +GK+ LV ++ + + G++ K L V G R+ IW+ G
Sbjct: 15 LSFKILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRLKLTIWDTAG 74
Query: 155 DGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLG-WYKEARKW--NQTAIPVLIGTKFD 211
+ + + I++++D+T R T ++ W KE + NQ + +L+G K D
Sbjct: 75 QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLVGNKVD 134
Query: 212 DFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVE 269
+ + + E + AK L L SA NV K F+ + K+ + P +E
Sbjct: 135 KDSERAVSRE-----EGLSLAKELGCLLLECSAKTRENVEKCFEELALKIMEAPSLLE 187
>Medtr8g103550.1 | RAB GTPase-like protein A5B | HC |
chr8:43575571-43573270 | 20130731
Length = 198
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 98 KISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDGK 157
K+ LLGD GKTS ++++V + + + G + L + A + + IW+ G +
Sbjct: 11 KLVLLGDMGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQER 70
Query: 158 TDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEA-RKWNQTAIPVLIGTKFDDFIQL 216
P+ + S A ++++D+TS + W +E R+ N I +L+ K D Q
Sbjct: 71 YHSLAPMYYRGSAAAIVVYDITSMDSFVRAKKWVREVQRQANPNLIMLLVANKADLEDQR 130
Query: 217 PIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
+ + E YAK + F +SA NVN++F I +L
Sbjct: 131 KVGNE-----EGEEYAKENGMSFFETSAKTAQNVNELFYEIAKRL 170
>Medtr8g090215.1 | RAB GTPase-like protein B1C | HC |
chr8:37854485-37851712 | 20130731
Length = 207
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Query: 92 SDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWE 151
S L K+ LGD +GKTS + +++ D+ + G++ + KT+ +E + +W+
Sbjct: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 152 VQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQT-AIPVLIGTKF 210
G + +P +DS +I++D+ +R + + W +E R+ + I VL+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRQERGSDVIIVLVGNKT 124
Query: 211 DDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
D + + ++ E +K +SA N+ +F+ I + L
Sbjct: 125 DLVEKRQVSIE-----EGDAKSKEFGIMFIETSAKAGFNIKPLFRKIASAL 170
>Medtr1g090717.1 | RAB GTPase-like protein A5B | HC |
chr1:40716435-40711176 | 20130731
Length = 212
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 96 SLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRK-GLNQMDKTLVVEGARISYCIWEVQG 154
S K+ L+GD +GK+S L+ ++ + +L G++ K + R+ IW+ G
Sbjct: 15 SFKVLLIGDSGVGKSSLLLSFISNANSLDDLSPTIGVDFKIKLFTIGDKRLKLTIWDTAG 74
Query: 155 DGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLG-WYKEARKW--NQTAIPVLIGTKFD 211
+ + + + I++++D+T R T +++G W KE + N I +L+G K D
Sbjct: 75 QERFGTVICSYYRGAHGIVLVYDVTRRETFTNLVGTWAKEVGLYSTNHDCIKILVGNKVD 134
Query: 212 DFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVER 270
+ + + E AK SA NV + FK +T K+ ++P E+
Sbjct: 135 KESERAVSKE-----EGMALAKEHRCLFLECSAKTKENVQQCFKDLTLKILEVPSLREK 188
>Medtr3g069510.1 | RAB GTPase-like protein A1D | HC |
chr3:31090285-31088261 | 20130731
Length = 216
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Query: 89 DFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYC 148
D E D + KI L+GD +GK++ L ++ +E G+ +T+ VEG +
Sbjct: 6 DNEYDYL-FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQ 64
Query: 149 IWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGT 208
IW+ G + + +V L+++D+T R T +V W +E R + I +++
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMLAG 124
Query: 209 KFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTV 268
D L+ + +A+ A+ + +SA +NV K F+ I LFD+ +
Sbjct: 125 NKSDLNH----LRAVSSDDAQNLAEKETLSFLETSALEALNVEKAFQTI---LFDIYQII 177
Query: 269 ER 270
+
Sbjct: 178 SK 179
>Medtr4g064897.1 | RAB GTPase-like protein A1D | HC |
chr4:24249982-24247615 | 20130731
Length = 215
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 5/179 (2%)
Query: 86 HTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARI 145
H D E D + KI L+GD +GK++ L ++ +E G+ +TL VEG +
Sbjct: 3 HRVDHEYDYL-FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 146 SYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVL 205
IW+ G + + +V L+++D+T R T ++V W +E R + I ++
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVIM 121
Query: 206 IGTKFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDL 264
+ D L+ + + A+ + +SA N+ K F+ I +++ +
Sbjct: 122 MAGNKSDLNH----LRAVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTILTEIYHI 176
>Medtr1g068730.1 | RAB GTPase-like protein A5B | HC |
chr1:29344444-29337634 | 20130731
Length = 216
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 79 VAPPPVFHTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTL 138
+A PP D++ +K+ L+GD +GK+ L+++ + G++ +T+
Sbjct: 1 MAAPPARARSDYD---YLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTI 57
Query: 139 VVEGARISYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWN 198
++G RI IW+ G + + ++ IL+++D+T + N++ W + +
Sbjct: 58 ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHA 117
Query: 199 QTAI-PVLIGTKFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF 254
+ +L+G K D + + S+ + A F +SA N+NV+++F
Sbjct: 118 SDNVNKILVGNKAD----MDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDEVF 170
>Medtr3g087160.1 | RAB GTPase-like protein B1C | HC |
chr3:39530214-39525780 | 20130731
Length = 206
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 92 SDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWE 151
S L K+ LGD +GKTS + +++ D+ + G++ + KT+ +E + +W+
Sbjct: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 152 VQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEAR-KWNQTAIPVLIGTKF 210
G + +P +DS +I++D+ +R + + W +E R + I VL+G K
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRAERGSDVIIVLVGNKT 124
Query: 211 DDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
D + + ++ E ++ +SA N+ +F+ I + L
Sbjct: 125 DLVEKRQVSIE-----EGDAKSRESGIMFIETSAKAGFNIKPLFRKIASAL 170
>Medtr2g005510.1 | RAB GTPase-like protein A1D | HC |
chr2:188783-187481 | 20130731
Length = 220
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK++ L ++ +E G+ +TL VEG + IW+ G
Sbjct: 16 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFDDFIQ 215
+ + ++ L+++D+T T ++V W KE R I + LIG K D
Sbjct: 76 RYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIGNKTD---- 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDL 264
L+ +A++YA+ + +SA NV K F+ +++ +
Sbjct: 132 -LKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRI 179
>Medtr1g068740.1 | RAB GTPase-like protein A5B | HC |
chr1:29352144-29345511 | 20130731
Length = 216
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 81/177 (45%), Gaps = 8/177 (4%)
Query: 79 VAPPPVFHTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTL 138
+A PP D++ +K+ L+GD +GK+ L+++ + G++ +T+
Sbjct: 1 MAAPPARARSDYD---YLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTI 57
Query: 139 VVEGARISYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWN 198
++G RI IW+ G + + ++ IL+++D+T + N++ W + +
Sbjct: 58 ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHA 117
Query: 199 QTAI-PVLIGTKFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF 254
+ +L+G K D + + S+ + A F +SA N+NV ++F
Sbjct: 118 SDNVNKILVGNKAD----MDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVF 170
>Medtr3g086980.1 | RAB GTPase-like protein A1D | HC |
chr3:39434756-39431186 | 20130731
Length = 222
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK+ L ++ ++ G+ +TLV+E + IW+ G
Sbjct: 17 FKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSVKAQIWDTAGQE 76
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARK-WNQTAIPVLIGTKFDDFIQ 215
+ + +V ++++D+T R + + + W +E R ++ + +LIG K D
Sbjct: 77 RYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIVIILIGNKSD---- 132
Query: 216 LPIDLQWTIASE-ARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLTV 274
++ Q + +E A+ +A+ +SA NV F + ++F++ ++NL
Sbjct: 133 --LEEQRAVPTEDAKEFAEKEGLFFLETSALQATNVETAFMTVLTEIFNI--VNKKNLAA 188
Query: 275 GE 276
E
Sbjct: 189 DE 190
>Medtr2g096550.1 | RAB GTPase-like protein A1D | HC |
chr2:41238336-41235628 | 20130731
Length = 213
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 76/160 (47%), Gaps = 6/160 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
+K+ L+GD +GK+S L+++ + G++ ++ + ++G +I +W+ G
Sbjct: 16 IKLLLIGDSGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAI--PVLIGTKFDDFI 214
+ + ++ IL+++D+T + N++ W + + + I +L+G K D
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVD--- 132
Query: 215 QLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF 254
+ + S+ + A F +SA N+NV++ F
Sbjct: 133 -MDESKRAVPFSKGQALANKYGIKFFETSAKTNLNVDEAF 171
>Medtr1g052475.1 | RAB GTPase-like protein A1D | HC |
chr1:21336471-21339658 | 20130731
Length = 223
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GKT L ++ ++ G+ KTLV++ + IW+ G
Sbjct: 16 FKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFDDFIQ 215
+ + +V ++++D+T R + + + W +E R T I + LIG K D
Sbjct: 76 RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIMLIGNKCD---- 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDL 264
L+ +A+ +A+ N +SA + NV F I +++ L
Sbjct: 132 -LGTLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRL 179
>Medtr2g005500.1 | RAB GTPase-like protein B1C | HC |
chr2:184631-186040 | 20130731
Length = 203
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ ++GD +GK+ L+++ D + + G++ +T+ +EG IW+ G
Sbjct: 10 FKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKLQIWDTAGQE 69
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKW-NQTAIPVLIGTKFDDFIQ 215
+ + + I+I++D+T + N+V W E ++ N + +L+G K D
Sbjct: 70 RFRTITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGNKCD---- 125
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
D + A+ +A L +SA +INV + F + A++
Sbjct: 126 -LTDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEI 170
>Medtr2g083860.1 | RAB GTPase-like protein A1D | HC |
chr2:35195372-35201445 | 20130731
Length = 218
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK++ L ++ +E G+ K+L V+ I IW+ G
Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIWDTAGQE 73
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFD--DF 213
+ + +V L+++D+T R T + W KE R I V LIG K D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHL 133
Query: 214 IQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
+ +P + + +++A+ + +SA NV F + ++++
Sbjct: 134 VAVPTE-------DGKSFAERESLYFMETSALEATNVENAFTEVLSQIY 175
>Medtr1g078200.1 | RAB GTPase-like protein C2B | HC |
chr1:34998790-34993821 | 20130731
Length = 224
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 84 VFHTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGA 143
F+ + +++ KI L+GD +GK++ L ++ DE G+ + + + G
Sbjct: 2 AFNNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGK 61
Query: 144 RISYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKW-NQTAI 202
+ IW+ G + + +V L+++D++ R T +S+ W E + +
Sbjct: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
Query: 203 PVLIGTKFD--DFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAK 260
+L+G K D D ++P +E + A+A +SA + NV F+ + +
Sbjct: 122 TILVGNKSDLKDAREVP-------TTEGKALAEAQGLFFMETSALDSSNVVAAFQTVVKE 174
Query: 261 LFDL 264
++++
Sbjct: 175 IYNI 178
>Medtr3g064390.2 | small GTPase family RAB protein | HC |
chr3:28986937-28992404 | 20130731
Length = 158
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 98 KISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDGK 157
K+ LLGD GK+S ++++V + + + G +TL V A + + IW+ G +
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 158 TDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKW-NQTAIPVLIGTKFD 211
P+ + + A +I++D+TS + + W +E +K N + L G K D
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMALAGNKSD 126
>Medtr7g100020.2 | RAB GTPase-like protein A5B | HC |
chr7:40194971-40198587 | 20130731
Length = 216
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
+K+ L+GD +GK+ L+++ + G++ +T+ ++G RI IW+ G
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAI-PVLIGTKFDDFIQ 215
+ + ++ IL+++D+T + N++ W + + + +L+G K D
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD---- 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF 254
+ + S+ + A F +SA N+NV ++F
Sbjct: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVF 170
>Medtr7g100020.1 | RAB GTPase-like protein A5B | HC |
chr7:40194971-40198610 | 20130731
Length = 216
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
+K+ L+GD +GK+ L+++ + G++ +T+ ++G RI IW+ G
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAI-PVLIGTKFDDFIQ 215
+ + ++ IL+++D+T + N++ W + + + +L+G K D
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD---- 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF 254
+ + S+ + A F +SA N+NV ++F
Sbjct: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVF 170
>Medtr8g089985.1 | RAB GTPase-like protein A1D | HC |
chr8:37627491-37624788 | 20130731
Length = 225
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK+ L ++ +E G+ +TLV++ + IW+ G
Sbjct: 18 FKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQE 77
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARK-WNQTAIPVLIGTKFDDFIQ 215
+ + +V ++++D+T R T + + W +E R ++ + +L+G K D
Sbjct: 78 RYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGNKSD---- 133
Query: 216 LPIDLQWTIASE-ARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLTV 274
++ Q + +E A+ +A+ +SA NV F + +++++ ++NL
Sbjct: 134 --LENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNI--VNKKNLAA 189
Query: 275 GE 276
E
Sbjct: 190 DE 191
>Medtr1g115325.1 | RAB GTPase-like protein A5B | HC |
chr1:52031011-52034310 | 20130731
Length = 215
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
+K+ L+GD +GK+ L+++ + G++ +T+ ++G RI IW+ G
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAI-PVLIGTKFDDFIQ 215
+ + ++ IL+++D+T + N++ W + + + +L+G K D
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD---- 131
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIF 254
+ + S+ + A F +SA N+NV ++F
Sbjct: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVF 170
>Medtr8g107070.1 | RAB GTPase-like protein A2D | HC |
chr8:45233889-45231298 | 20130731
Length = 265
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 89 DFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYC 148
D E D + K L+GD +GK++ L ++ DE G+ + + V I
Sbjct: 8 DEECDYL-FKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQ 66
Query: 149 IWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKW-NQTAIPVLIG 207
IW+ G + + ++ L+++D+T R + SV W E R++ + + +L+G
Sbjct: 67 IWDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVG 126
Query: 208 TKFDDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWT 267
K D + + EA+ +A+A +SA N+NV ++F + +FD+ T
Sbjct: 127 NKCD-----LGESREVEEEEAKRFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDI--T 179
Query: 268 VERNL 272
+R+L
Sbjct: 180 NQRSL 184
>Medtr0262s0050.1 | RAB GTPase-like protein A1D | HC |
scaffold0262:13029-14834 | 20130731
Length = 222
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GKT L ++ +E + G+ KTL+++ + IW+ G
Sbjct: 16 FKVVLIGDSAVGKTQLLGRFARNEFKVDSKATIGVEFQTKTLIIDNKTVKAQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARK-WNQTAIPVLIGTKFDDFIQ 215
+ + +V ++++D+T R + + + W +E R ++ + +LIG K D
Sbjct: 76 RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRSHADKNIVIMLIGNKCDLSYL 135
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
+ ++ +A +A+ N +SA NV F I +++
Sbjct: 136 RAVPME-----DAEEFAQRENLFFMETSALEATNVETCFLTILTEIY 177
>Medtr2g075950.1 | RAB GTPase-like protein A1D | HC |
chr2:31789231-31793100 | 20130731
Length = 217
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK++ L ++ +E G+ +TL V+ I IW+ G
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQE 73
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFDDFIQ 215
+ + +V L+++D+T T +V W KE R + I V L+G K
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNK------ 127
Query: 216 LPIDLQWTIA---SEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
DL+ +A + ++YA+ + +SA NV F + +++
Sbjct: 128 --ADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIY 175
>Medtr4g079350.1 | RAB GTPase-like protein C2B | HC |
chr4:30648654-30646057 | 20130731
Length = 217
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK++ L ++ +E G+ +++ V+ + IW+ G
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQE 73
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFDDFIQ 215
+ + +V L+++D+T T +V W KE R I + L+G K D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD---- 129
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
L+ +A+ +A+ N +SA ++NV+ F + +++
Sbjct: 130 -LRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIY 175
>Medtr1g068730.2 | RAB GTPase-like protein A5B | HC |
chr1:29344444-29337634 | 20130731
Length = 171
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 79 VAPPPVFHTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTL 138
+A PP D++ +K+ L+GD +GK+ L+++ + G++ +T+
Sbjct: 1 MAAPPARARSDYD---YLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTI 57
Query: 139 VVEGARISYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWN 198
++G RI IW+ G + + ++ IL+++D+T + N++ W + +
Sbjct: 58 ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHA 117
Query: 199 QTAI-PVLIGTKFD 211
+ +L+G K D
Sbjct: 118 SDNVNKILVGNKAD 131
>Medtr3g107707.1 | GTP-binding nuclear Ran-like protein | HC |
chr3:49686750-49683969 | 20130731
Length = 221
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 7/173 (4%)
Query: 93 DLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEV 152
D S K+ ++GD GKT+F+ +++ E E+ G+ +I + W+
Sbjct: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
Query: 153 QGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDD 212
G K +IMFD+T+R T +V W+++ + + VL G K D
Sbjct: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVD- 128
Query: 213 FIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLP 265
+ ++ T+ + N + SA N N K F ++ KL P
Sbjct: 129 ------VKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDP 175
>Medtr1g068740.2 | RAB GTPase-like protein A5B | HC |
chr1:29352144-29345511 | 20130731
Length = 197
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 79 VAPPPVFHTHDFESDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTL 138
+A PP D++ +K+ L+GD +GK+ L+++ + G++ +T+
Sbjct: 1 MAAPPARARSDYD---YLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTI 57
Query: 139 VVEGARISYCIWEVQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWN 198
++G RI IW+ G + + ++ IL+++D+T + N++ W + +
Sbjct: 58 ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHA 117
Query: 199 QTAI-PVLIGTKFD 211
+ +L+G K D
Sbjct: 118 SDNVNKILVGNKAD 131
>Medtr3g107717.1 | GTP-binding nuclear Ran-like protein | HC |
chr3:49697497-49694259 | 20130731
Length = 221
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 7/173 (4%)
Query: 93 DLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEV 152
D S K+ ++GD GKT+F+ +++ E E+ G+ +I + W+
Sbjct: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
Query: 153 QGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDD 212
G K +IMFD+T+R T +V W+++ + + VL G K D
Sbjct: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVD- 128
Query: 213 FIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLP 265
+ ++ T+ + N + SA N N K F ++ KL P
Sbjct: 129 ------VKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDP 175
>Medtr3g107713.1 | GTP-binding nuclear Ran-like protein | HC |
chr3:49692352-49689734 | 20130731
Length = 221
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 7/173 (4%)
Query: 93 DLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEV 152
D S K+ ++GD GKT+F+ +++ E E+ G+ +I + W+
Sbjct: 10 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDT 69
Query: 153 QGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDD 212
G K +IMFD+T+R T +V W+++ + + VL G K D
Sbjct: 70 AGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVD- 128
Query: 213 FIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLP 265
+ ++ T+ + N + SA N N K F ++ KL P
Sbjct: 129 ------VKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDP 175
>Medtr1g029450.1 | small GTPase family RAB protein | HC |
chr1:10110413-10114701 | 20130731
Length = 215
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRK-GLNQMDKTLVVEGARISYCIWEVQGD 155
K+ ++GD +GK++ L+++ D E +L G++ K + + G ++ IW+ G
Sbjct: 18 FKLLMIGDSGVGKSTLLLRFTSDNFE--DLSPTIGVDFKVKYVTLGGKKLKLAIWDTAGQ 75
Query: 156 GKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLG-WYKEARKW--NQTAIPVLIGTKFDD 212
+ + + I++++D+T R T ++ W KE + NQ I +L+G K D
Sbjct: 76 ERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 135
Query: 213 FIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLP 265
+ + EA +A+ SA +NV + F+ + K+ D P
Sbjct: 136 ESERAV-----TKKEAVDFARQYGCLYTECSAKTRVNVEQCFEELVMKILDTP 183
>Medtr7g405790.1 | RAB GTPase-like protein A1D | HC |
chr7:264041-266047 | 20130731
Length = 220
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 78/170 (45%), Gaps = 10/170 (5%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ ++GD +GK++ L +Y +E G+ ++L ++ + IW+ G
Sbjct: 16 FKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTAGQE 75
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIP-VLIGTK--FDDF 213
+ + +V LI++D++ R T +SV W E + T + +L+G K D+
Sbjct: 76 RFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLDNI 135
Query: 214 IQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFD 263
+ I+ E ++ A++ +SA + NV F+ + ++++
Sbjct: 136 RDVSIE-------EGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYN 178
>Medtr8g027220.1 | Ras-related small GTP-binding family protein | HC
| chr8:9528022-9525895 | 20130731
Length = 232
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ ++GD +GKT L ++ +E G+ +T+ + G I IW+ G
Sbjct: 27 FKVVVIGDSAVGKTQILSRFSKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIWDTAGQE 86
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFDDFIQ 215
+ + ++ ++++D+T R + + V W +E R +I + L+G K D
Sbjct: 87 RYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIMLVGNKGD---- 142
Query: 216 LPIDLQWTIASEARTYAKALNATLFFS--SATYNINVNKIF 254
+DL+ +A +A+ + LFFS SA +NV F
Sbjct: 143 -LVDLRMVPTEDAVEFAE--DQGLFFSETSALTGVNVEGAF 180
>Medtr8g093740.1 | RAB GTPase-like protein A5B | HC |
chr8:39223227-39227011 | 20130731
Length = 208
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRK-GLNQMDKTLVVEGARISYCIWEVQGD 155
K+ ++GD +GK+S L+++ D+ + +L G++ K + +EG ++ IW+ G
Sbjct: 14 FKLLMIGDSGVGKSSLLLRFTSDDFD--DLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQ 71
Query: 156 GKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLG-WYKEARKW--NQTAIPVLIGTKFDD 212
+ + + I++++D+T R T ++ W KE + NQ + +L+G K D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKMLVGNKVDK 131
Query: 213 FIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLP 265
+ E +A+ SA +NV + F+ + K+ D P
Sbjct: 132 EGDRVV-----TKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKVLDTP 179
>Medtr8g093740.2 | RAB GTPase-like protein A5B | HC |
chr8:39223240-39227053 | 20130731
Length = 208
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRK-GLNQMDKTLVVEGARISYCIWEVQGD 155
K+ ++GD +GK+S L+++ D+ + +L G++ K + +EG ++ IW+ G
Sbjct: 14 FKLLMIGDSGVGKSSLLLRFTSDDFD--DLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQ 71
Query: 156 GKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLG-WYKEARKW--NQTAIPVLIGTKFDD 212
+ + + I++++D+T R T ++ W KE + NQ + +L+G K D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKMLVGNKVDK 131
Query: 213 FIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLP 265
+ E +A+ SA +NV + F+ + K+ D P
Sbjct: 132 EGDRVV-----TKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKVLDTP 179
>Medtr4g088090.1 | RAB GTPase-like protein A1D | HC |
chr4:34699316-34702141 | 20130731
Length = 217
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK++ L ++ +E G+ +++ V+ + IW+ G
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFDDFIQ 215
+ + +V L+++D+T T +V W KE R I V L+G K D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKAD---- 129
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
L+ +A ++++ N +SA ++NV F + +++
Sbjct: 130 -LRHLRAVSTEDATSFSERENTYFMETSALESLNVESAFTEVLTQIY 175
>Medtr7g051940.1 | RAB GTPase-like protein A1D | HC |
chr7:18234251-18230040 | 20130731
Length = 215
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
KI L+GD +GK++ L ++ +E + G+ + + ++G + IW+ G
Sbjct: 14 FKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAGQE 73
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIP-VLIGTKFD--DF 213
+ + + L+++D++ R T S+ W E N + + +L+G K D +
Sbjct: 74 RFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLENI 133
Query: 214 IQLPIDLQWTIASEARTYAKALNATLFF--SSATYNINVNKIFKFITAKLFD 263
++ I+ +A E LFF +SA + NV F+ + ++++
Sbjct: 134 REVSIEEGKALAEE---------EGLFFMETSALDSTNVQTAFEIVIREIYN 176
>Medtr2g102060.1 | small GTPase family RAB protein | HC |
chr2:43921046-43919465 | 20130731
Length = 200
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
Query: 92 SDLVSLKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWE 151
+ ++ K+ LLGD GKTS +++V + Q + G + L + A + + IW+
Sbjct: 6 NKIIQAKLVLLGDMGTGKTSLALRFVKGQFFQNQEPTIGAAFFTQILSLSEATVKFDIWD 65
Query: 152 VQGDGKTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKE-ARKWNQTAIPVLIGTKF 210
G + P+ + + A ++++D++S T W +E R +Q + L+ K
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIVVYDISSIDTFVRAKKWVQELQRHGSQKLVMALVANKC 125
Query: 211 DDFIQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKL 261
D + ++ + + +A+ +SA N+N++F I +L
Sbjct: 126 DLEPKREVETE-----DGEQFAQENGMFYMETSAKTAENINELFYEIGRRL 171
>Medtr2g090865.1 | RAB GTPase-like protein A1D | HC |
chr2:39001995-38999681 | 20130731
Length = 215
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK++ L ++ +E G+ +++ + + IW+ G
Sbjct: 12 FKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQIWDTAGQE 71
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFDDFIQ 215
+ + +V L+++D T T +V W KE R + + L+G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVGNKAD---- 127
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDL 264
LQ EA T+A+ N +SA ++NV+ F + +++++
Sbjct: 128 -LKHLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNV 175
>Medtr2g014990.1 | RAB GTPase-like protein A1D | HC |
chr2:4375511-4372352 | 20130731
Length = 217
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 6/167 (3%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ L+GD +GK++ L ++ +E G+ +++ V+ + IW+ G
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQE 73
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPV-LIGTKFDDFIQ 215
+ + +V L+++D+T T +V W KE R I V L+G K D
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKAD---- 129
Query: 216 LPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLF 262
L+ ++ +A+ N +SA ++NV F + +++
Sbjct: 130 -LRHLRAVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
>Medtr2g090875.1 | Rho-like GTP-binding protein | HC |
chr2:39006073-39004055 | 20130731
Length = 196
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
+K +GD +GKT L+ Y + + + +VV+G+ ++ +W+ G
Sbjct: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVL-GWYKEARKWNQTAIPVLIGTKFD 211
+ P++ + + L+ F L SR + ++ W E R + T VL+GTK D
Sbjct: 66 DYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPTVPIVLVGTKLD 121
>Medtr3g096350.1 | small GTPase family RAB protein | HC |
chr3:44038043-44043862 | 20130731
Length = 207
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 9/172 (5%)
Query: 97 LKISLLGDCQIGKTSFLVKYVGDEKEQGELQRKGLNQMDKTLVVEGARISYCIWEVQGDG 156
K+ ++GD +GK+S L+ + D E G++ K ++G ++ IW+ G
Sbjct: 13 FKLLMIGDSGVGKSSLLLCFTSDSFENLS-PTIGVDFKVKYFTIDGKKLKLAIWDTAGQE 71
Query: 157 KTDDQMPIACKDSVAILIMFDLTSRCTLNSVLG-WYKEARKW--NQTAIPVLIGTKFDDF 213
+ + + I++ +D+T R T ++ W KE + NQ I +L+G K D
Sbjct: 72 RFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKMLVGNKVDKE 131
Query: 214 IQLPIDLQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLP 265
+ E +A+ SA +NV F+ + K+ D P
Sbjct: 132 SDRVV-----TKKEGIDFAREYGCLFIECSAKTRVNVQHCFEELVLKILDTP 178