Miyakogusa Predicted Gene

Lj3g3v2888680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2888680.1 Non Characterized Hit- tr|I1LRS5|I1LRS5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26747
PE,72.42,0,TraB,Pheromone shutdown, TraB; seg,NULL; SUBFAMILY NOT
NAMED,NULL; PHEROMONE SHUTDOWN PROTEIN,NULL,CUFF.44939.1
         (410 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g046707.1 | TraB family protein | HC | chr4:16509081-16515...   516   e-146
Medtr6g055230.1 | TraB family protein | HC | chr6:19756417-19751...   213   2e-55
Medtr1g101540.1 | TraB family protein | HC | chr1:45862642-45859...   121   1e-27
Medtr4g046663.1 | TraB family protein | HC | chr4:16444991-16443...    98   1e-20

>Medtr4g046707.1 | TraB family protein | HC | chr4:16509081-16515053
           | 20130731
          Length = 358

 Score =  516 bits (1328), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/359 (72%), Positives = 291/359 (81%), Gaps = 4/359 (1%)

Query: 55  MDAQPPESGA--PVAGNEDFVHVHDLNMESLSDSMVRIDEPSSDXXXXXXXXXXXXXGPE 112
           MDA PP+S +  P A  EDF+H+HDL MESLSDSMVRID+ SSD             G +
Sbjct: 1   MDAHPPDSSSATPAAAVEDFIHIHDLKMESLSDSMVRIDDHSSDSVDAAASSAPPDAGED 60

Query: 113 SLLDATYYRPE-SLPEELSRNVIVLTCESATADEGLCNVYLVGTAHVSEESSREVQAIVS 171
           ++      R + +LPEELSRNVIVL+CES +A+ G+C+VYLVGTAHVSEESS+EVQAIVS
Sbjct: 61  AVAAVDSDRQKVTLPEELSRNVIVLSCES-SAEGGVCDVYLVGTAHVSEESSKEVQAIVS 119

Query: 172 YLKPEVVFLELCSSRVAVLTPQILKVPTFGEMIAMMKKKHNMFEVLYGSFLAKIASRLEV 231
            LKPE VFLELCSSRV VLT Q LKVPT  EMI ++KK  NMFEVLYG FLAKIAS+LEV
Sbjct: 120 LLKPEAVFLELCSSRVQVLTLQNLKVPTMREMIELLKKNRNMFEVLYGWFLAKIASKLEV 179

Query: 232 FPGSEFRVAYEEAIKYGGRVILGDRPVQITLKRTWSKMPLWHKTKLVYNLLFQAVFLPSS 291
           FPGSEFRVAYEEAIKYGGRVILGDRPVQITLKRTWSKMPLW+KTKLVY+LLFQAVFLPSS
Sbjct: 180 FPGSEFRVAYEEAIKYGGRVILGDRPVQITLKRTWSKMPLWYKTKLVYSLLFQAVFLPSS 239

Query: 292 DDLNKMLKEMDDNDMLTLVIQEMSKEFPTLMETLVHERDKYMSCALLRVACQNSCVVAVV 351
           DDLN MLKEMDD+DMLTLVIQEMSKEFPTLMETLVHERD+YMS  LL+VA ++  VVAVV
Sbjct: 240 DDLNNMLKEMDDSDMLTLVIQEMSKEFPTLMETLVHERDQYMSSTLLKVASESRSVVAVV 299

Query: 352 GKGHLQGIKKHWKQHVVMSDLMTIPSPKPGISALKVFTXXXXXXXXXXXXXXXYLSCKK 410
           GKGHLQG+KK+WKQ VV+ DLMT+PSPKP ISA++VFT               YLSCKK
Sbjct: 300 GKGHLQGMKKNWKQPVVIKDLMTVPSPKPAISAMRVFTSVGVGVAGVAIISGIYLSCKK 358


>Medtr6g055230.1 | TraB family protein | HC | chr6:19756417-19751683
           | 20130731
          Length = 307

 Score =  213 bits (542), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 117/253 (46%), Positives = 161/253 (63%), Gaps = 39/253 (15%)

Query: 121 RPESLPEELSRNVIVLTCESATADEGLCNVYLVGTAHVSEESSREVQAIVSYLKPEVVFL 180
           R   LP+EL++NVI L+C+S     G+C+VYLVGT H ++ESS++V+ IV +LKPE+VFL
Sbjct: 47  RRLELPKELTKNVIQLSCDSMEKG-GVCDVYLVGTFHGNKESSKQVEEIVKFLKPEIVFL 105

Query: 181 ELCSSRVAVLTPQILKVPTFGEMI-AMMKKKHNMFEVLYGSFLAKIASRLEVFPGSEFRV 239
           ELCS R  VL    ++  T GEM  AM K+K+++F ++     A+I SR + +P ++FR 
Sbjct: 106 ELCSDRQEVLLHDNMEALTMGEMNDAMRKEKYSIFRMVTSWLDAEIDSRCDGYPFAQFRS 165

Query: 240 AYEEAIKYGGRVILGDRPVQITLKRTWSKMPLWHKTKLVYNLLFQAVFLPSSDDLNKMLK 299
           AY+EAIKY G V+LGDR ++ITLKRTWSK+PLWH  KL+                     
Sbjct: 166 AYKEAIKYSGIVVLGDRRLEITLKRTWSKLPLWHIPKLLIR------------------- 206

Query: 300 EMDDNDMLTLVIQEMSKEFPTLMETLVHERDKYMSCALLRVACQNSCVVAVVGKGHLQGI 359
                             FPT+ E +VHERD+YMS  LL VA ++  VVAVVG+GHL+GI
Sbjct: 207 ------------------FPTIREAMVHERDRYMSHTLLTVARKSRTVVAVVGEGHLEGI 248

Query: 360 KKHWKQHVVMSDL 372
           KK+WKQ + + +L
Sbjct: 249 KKNWKQPIEIQEL 261


>Medtr1g101540.1 | TraB family protein | HC | chr1:45862642-45859318
           | 20130731
          Length = 380

 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 127/229 (55%), Gaps = 21/229 (9%)

Query: 150 VYLVGTAHVSEESSREVQAIVSYLKPEVVFLELCSSRVAVLTP------QILKVPTF--- 200
           ++L+GT HVS+ES+ +V+ +V  +KP+ V +ELC SR  ++        + L+   F   
Sbjct: 93  IWLIGTTHVSKESAMDVERVVKAVKPDNVVVELCRSRAGIMYADDDQLDKQLRSTMFSLS 152

Query: 201 --------GEMIAMMKKKHNMFEVLYGSFLAKIASRLEVFPGSEFRVAYEEAIKYGGRVI 252
                   G  I +  +      +L  +F +KI+S ++   G EFR A + + + G +++
Sbjct: 153 GTGFFGAIGRSINLGGQTALALRLLLAAFSSKISSNIDRPFGDEFRAARKVSEEVGAQLV 212

Query: 253 LGDRPVQITLKRTWSKMPLWHKTKLVYNLLFQAVFLPSSDDLNKMLKEMDDNDMLTLVIQ 312
           LGDRP++ITL+R W  +  W +   +  ++ + +   SSD     L++   ND    + +
Sbjct: 213 LGDRPIEITLQRAWKALN-WTQKLSLLTIVVRGI-TSSSDISTDKLEKASSNDGTLQLYE 270

Query: 313 EMSKEFPTLMETLVHERDKYMSCALLRVACQNSC--VVAVVGKGHLQGI 359
           ++S  +P+L+  L+HERD Y++ +L R    N+C  VV V+GKGH+ G+
Sbjct: 271 QLSFSYPSLLPPLIHERDTYLAWSLKRSKAVNNCKRVVGVIGKGHMNGV 319


>Medtr4g046663.1 | TraB family protein | HC | chr4:16444991-16443955
           | 20130731
          Length = 93

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/76 (60%), Positives = 59/76 (77%)

Query: 314 MSKEFPTLMETLVHERDKYMSCALLRVACQNSCVVAVVGKGHLQGIKKHWKQHVVMSDLM 373
           MSK  PT+METLVHERD+YMS  LL+ A ++  VVAVVG+ HL+G+K +WKQ V + DL 
Sbjct: 1   MSKTLPTVMETLVHERDQYMSYTLLKGASESRTVVAVVGRMHLEGMKNNWKQPVNIEDLQ 60

Query: 374 TIPSPKPGISALKVFT 389
           TIP PKP + A+K+FT
Sbjct: 61  TIPPPKPIVLAIKIFT 76