Miyakogusa Predicted Gene

Lj3g3v2862530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2862530.1 Non Characterized Hit- tr|K4DCP0|K4DCP0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,55.95,4e-19,
,CUFF.44858.1
         (93 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g046033.1 | hypothetical protein | HC | chr4:16059751-1606...   152   1e-37
Medtr2g080270.1 | hypothetical protein | HC | chr2:33883039-3388...   105   8e-24
Medtr2g080270.4 | hypothetical protein | HC | chr2:33883043-3388...    61   2e-10
Medtr2g080270.2 | hypothetical protein | HC | chr2:33883043-3388...    59   7e-10
Medtr2g080270.3 | hypothetical protein | HC | chr2:33883043-3388...    59   9e-10
Medtr2g080270.5 | hypothetical protein | HC | chr2:33883043-3388...    59   9e-10

>Medtr4g046033.1 | hypothetical protein | HC |
          chr4:16059751-16062963 | 20130731
          Length = 93

 Score =  152 bits (383), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 74/92 (80%), Positives = 79/92 (85%)

Query: 1  MASLVRGAASLSRTAISASKSPIQLLHRRNFAGAADHHGPAKVDFWKDPMSPSKWKEEHF 60
          MASLVRGAASL+R    +SKSPIQL+HRR  A AADHHG AKV  WKDPMSPSKWKEEHF
Sbjct: 1  MASLVRGAASLTRITAPSSKSPIQLIHRRGLAAAADHHGSAKVACWKDPMSPSKWKEEHF 60

Query: 61 VIVSLTGWGLLIYGGYKLATGGKKEEKLVKAS 92
          VIVSLTGWGL  YGGYKL +GGKKEEKLV+AS
Sbjct: 61 VIVSLTGWGLTFYGGYKLFSGGKKEEKLVEAS 92


>Medtr2g080270.1 | hypothetical protein | HC |
          chr2:33883039-33886037 | 20130731
          Length = 94

 Score =  105 bits (262), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 55/69 (79%)

Query: 25 LLHRRNFAGAADHHGPAKVDFWKDPMSPSKWKEEHFVIVSLTGWGLLIYGGYKLATGGKK 84
          L+HRR  AG+AD HG  KV+ W+DP+SPSKWKEEHFVI SLTGW LL Y GYK  TGGKK
Sbjct: 25 LVHRRGMAGSADPHGTPKVNIWQDPLSPSKWKEEHFVIASLTGWTLLFYSGYKFFTGGKK 84

Query: 85 EEKLVKASQ 93
          EEK+ + S+
Sbjct: 85 EEKVAEPSK 93


>Medtr2g080270.4 | hypothetical protein | HC |
          chr2:33883043-33886032 | 20130731
          Length = 73

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/37 (67%), Positives = 30/37 (81%)

Query: 25 LLHRRNFAGAADHHGPAKVDFWKDPMSPSKWKEEHFV 61
          L+HRR  AG+AD HG  KV+ W+DP+SPSKWKEEH V
Sbjct: 25 LVHRRGMAGSADPHGTPKVNIWQDPLSPSKWKEEHIV 61


>Medtr2g080270.2 | hypothetical protein | HC |
          chr2:33883043-33886032 | 20130731
          Length = 72

 Score = 59.3 bits (142), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 25 LLHRRNFAGAADHHGPAKVDFWKDPMSPSKWKEEH 59
          L+HRR  AG+AD HG  KV+ W+DP+SPSKWKEEH
Sbjct: 25 LVHRRGMAGSADPHGTPKVNIWQDPLSPSKWKEEH 59


>Medtr2g080270.3 | hypothetical protein | HC |
          chr2:33883043-33886032 | 20130731
          Length = 81

 Score = 58.9 bits (141), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 25 LLHRRNFAGAADHHGPAKVDFWKDPMSPSKWKEEH 59
          L+HRR  AG+AD HG  KV+ W+DP+SPSKWKEEH
Sbjct: 25 LVHRRGMAGSADPHGTPKVNIWQDPLSPSKWKEEH 59


>Medtr2g080270.5 | hypothetical protein | HC |
          chr2:33883043-33886032 | 20130731
          Length = 81

 Score = 58.9 bits (141), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 25 LLHRRNFAGAADHHGPAKVDFWKDPMSPSKWKEEH 59
          L+HRR  AG+AD HG  KV+ W+DP+SPSKWKEEH
Sbjct: 25 LVHRRGMAGSADPHGTPKVNIWQDPLSPSKWKEEH 59