Miyakogusa Predicted Gene
- Lj3g3v2862400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2862400.1 tr|G7JUI4|G7JUI4_MEDTR Xylosyltransferase
OS=Medicago truncatula GN=MTR_4g022240 PE=4
SV=1,50.52,2e-19,GLYCOSYLATION ENZYME-LIKE PROTEIN,NULL;
GLYCOSYLTRANSFERASE 14 FAMILY MEMBER,NULL,CUFF.44820.1
(96 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr0072s0020.1 | core-2/I-branching enzyme | HC | scaffold0072... 170 2e-43
Medtr4g022240.1 | core-2/I-branching enzyme | HC | chr4:7421156-... 100 5e-22
Medtr6g011080.1 | BGGP beta-1-3-galactosyl-O-glycosyl-glycoprote... 97 5e-21
Medtr7g086720.1 | core-2/I-branching enzyme | HC | chr7:33717214... 73 5e-14
Medtr6g027550.1 | core-2/I-branching enzyme | HC | chr6:9538394-... 72 1e-13
Medtr1g046740.1 | core-2/I-branching enzyme | HC | chr1:17641296... 70 5e-13
Medtr2g085300.1 | core-2/I-branching enzyme | HC | chr2:33229518... 69 7e-13
Medtr2g085300.2 | core-2/I-branching enzyme | HC | chr2:33229698... 69 7e-13
Medtr1g108280.1 | core-2/I-branching enzyme | HC | chr1:48932778... 68 2e-12
Medtr0662s0030.1 | core-2/I-branching enzyme | HC | scaffold0662... 53 7e-08
Medtr4g114140.1 | core-2/I-branching enzyme | HC | chr4:47025211... 53 7e-08
Medtr0011s0310.1 | acetylglucosaminyltransferase, putative | HC ... 49 1e-06
Medtr4g008010.1 | core-2/I-branching enzyme | HC | chr4:1352266-... 48 2e-06
>Medtr0072s0020.1 | core-2/I-branching enzyme | HC |
scaffold0072:9281-4015 | 20130731
Length = 433
Score = 170 bits (431), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 78/96 (81%), Positives = 88/96 (91%)
Query: 1 MSLTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTHRFSHGAWCVGTLDAGADPC 60
MSLTMK+F+KM KSNAPFARKFA+DDPVLDKIDKE LGRTHRFS GAWC+G+ D GADPC
Sbjct: 338 MSLTMKNFDKMAKSNAPFARKFARDDPVLDKIDKELLGRTHRFSPGAWCIGSSDGGADPC 397
Query: 61 SVRCNDTVFSPGPGAERLHGLLQVLLSEEFQSKQCL 96
S+R NDTVF PGPGA++LH LLQVLLS+EF+SKQCL
Sbjct: 398 SLRGNDTVFRPGPGADKLHELLQVLLSDEFRSKQCL 433
>Medtr4g022240.1 | core-2/I-branching enzyme | HC |
chr4:7421156-7427008 | 20130731
Length = 419
Score = 99.8 bits (247), Expect = 5e-22, Method: Composition-based stats.
Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Query: 1 MSLTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTH-RFSHGAWCVGTLDAGADP 59
+SL ++ FE M S APFAR+F KDDP+LDKID+E LGR+ RF+ G WC+G G DP
Sbjct: 322 LSLKLEHFEDMAHSGAPFARRFDKDDPILDKIDRELLGRSDGRFTPGGWCLGNHLKGKDP 381
Query: 60 CSVRCNDTVFSPGPGAERLHGLLQVLL-SEEFQSKQC 95
C V N V +P ++ L L+ +LL SE F+ KQC
Sbjct: 382 CDVYGNPDVVNPSVRSKILEKLMLILLDSENFRPKQC 418
>Medtr6g011080.1 | BGGP beta-1-3-galactosyl-O-glycosyl-glycoprotein
| HC | chr6:3035128-3030995 | 20130731
Length = 433
Score = 96.7 bits (239), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/96 (48%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTHRFS-HGAWCVGTLDAGADPCS 61
LT+ D + M SNAPFARKF ++DPVLD+ID E L R G WC+G+ + G DPCS
Sbjct: 338 LTVADMKVMTDSNAPFARKFHREDPVLDRIDTELLSRNPGMPVPGGWCIGSRENGTDPCS 397
Query: 62 VRCNDTVFSPGPGAERLHGLLQVLLS-EEFQSKQCL 96
V N TV P G++RL L+ L+S E F+ +QC+
Sbjct: 398 VVGNTTVLRPENGSKRLETLITKLMSNENFRPRQCV 433
>Medtr7g086720.1 | core-2/I-branching enzyme | HC |
chr7:33717214-33721328 | 20130731
Length = 399
Score = 73.2 bits (178), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
Query: 2 SLTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTH-RFSHGAWCVGTLDAGADPC 60
SL +KD+ KMV S+ PFARKF +++ VLDKID++ L R FS G WC + C
Sbjct: 303 SLGLKDYRKMVLSSRPFARKFKRNNIVLDKIDRDLLKRYKGGFSFGGWC--SQGGRNKAC 360
Query: 61 S-VRC-NDTVFSPGPGAERLHGLL-QVLLSEEFQSKQC 95
S +R N + PGPG+ RL LL ++L+ + F+ QC
Sbjct: 361 SGLRAENYGLLKPGPGSRRLKNLLNKILMDKFFRQMQC 398
>Medtr6g027550.1 | core-2/I-branching enzyme | HC |
chr6:9538394-9535713 | 20130731
Length = 317
Score = 71.6 bits (174), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
Query: 2 SLTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTH-RFSHGAWCVGTLDAGAD-P 59
SLT+KD+ KMV SN PFARKF K+D VLDKID+E L R +FS G WC + G
Sbjct: 218 SLTLKDYRKMVLSNRPFARKFKKNDIVLDKIDRELLRRNRGQFSFGGWCSSSSQGGKKRA 277
Query: 60 C-SVRC-NDTVFSPGPGAERLHGLLQVLLS-EEFQSKQC 95
C S++ N V P ++++ ++ ++S + + +QC
Sbjct: 278 CHSLKIENYGVLKPSLASKKMKNMISNIISFKNLRKQQC 316
>Medtr1g046740.1 | core-2/I-branching enzyme | HC |
chr1:17641296-17635727 | 20130731
Length = 439
Score = 69.7 bits (169), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRT-HRFSHGAWCVGTLDAGADPCS 61
L DF+ M+ S A FA+KF DDPVLD ID++ L R+ G WC+G + G C
Sbjct: 346 LNSTDFDNMIHSGAVFAKKFQPDDPVLDLIDQKILNRSPGSVVPGGWCLG--EPGNSTCL 403
Query: 62 VRCNDTVFSPGPGAERLHGLLQVLLSE-EFQSKQCL 96
+ ++ PG G++RL + LLS F+S+QC+
Sbjct: 404 TWGDASILRPGKGSKRLEKAIVELLSNGTFRSRQCI 439
>Medtr2g085300.1 | core-2/I-branching enzyme | HC |
chr2:33229518-33233089 | 20130731
Length = 424
Score = 69.3 bits (168), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTH-RFSHGAWCVGTLDAGADPCS 61
L + D +KM+ S A FARKF +DDP +D IDK+ L + H F+ G WC +G C+
Sbjct: 334 LNINDTDKMIASGAAFARKFKQDDPAMDLIDKKLLKKRHGLFTLGGWC-----SGKPKCT 388
Query: 62 VRCNDTVFSPGPGAERLHGLLQVL-LSEEFQSKQC 95
N PGPGA+RL L+ L L + QC
Sbjct: 389 EVGNMYKLKPGPGAQRLQKLIAGLTLKAKSGQDQC 423
>Medtr2g085300.2 | core-2/I-branching enzyme | HC |
chr2:33229698-33233089 | 20130731
Length = 424
Score = 69.3 bits (168), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTH-RFSHGAWCVGTLDAGADPCS 61
L + D +KM+ S A FARKF +DDP +D IDK+ L + H F+ G WC +G C+
Sbjct: 334 LNINDTDKMIASGAAFARKFKQDDPAMDLIDKKLLKKRHGLFTLGGWC-----SGKPKCT 388
Query: 62 VRCNDTVFSPGPGAERLHGLLQVL-LSEEFQSKQC 95
N PGPGA+RL L+ L L + QC
Sbjct: 389 EVGNMYKLKPGPGAQRLQKLIAGLTLKAKSGQDQC 423
>Medtr1g108280.1 | core-2/I-branching enzyme | HC |
chr1:48932778-48928106 | 20130731
Length = 397
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 8 FEKMVKSNAPFARKFAKDDPVLDKIDKEALGR--THRFSHGAWCVGTLDAGADPCSVRCN 65
++ M +S A FAR+F ++PVLD IDK+ L R +R + GAWC G DPCS +
Sbjct: 306 YDMMAESGAAFARQFEANNPVLDMIDKKILQRGGRNRAAPGAWCSGRRSWWVDPCSQWGD 365
Query: 66 DTVFSPGPGAERLHGLLQVLLSE-EFQSKQC 95
+ PGP A++L + LL + Q+ QC
Sbjct: 366 VNILKPGPQAKKLEASVSSLLDDWTAQTNQC 396
>Medtr0662s0030.1 | core-2/I-branching enzyme | HC |
scaffold0662:4225-6508 | 20130731
Length = 292
Score = 52.8 bits (125), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 29/37 (78%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGR 39
LT + + MV+SNAPF RKF +++P+LDKID E LGR
Sbjct: 227 LTAEHYWSMVESNAPFGRKFGRNEPLLDKIDTELLGR 263
>Medtr4g114140.1 | core-2/I-branching enzyme | HC |
chr4:47025211-47028228 | 20130731
Length = 391
Score = 52.8 bits (125), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 29/37 (78%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGR 39
LT + + MV+SNAPF RKF +++P+LDKID E LGR
Sbjct: 326 LTAEHYWSMVESNAPFGRKFGRNEPLLDKIDTELLGR 362
>Medtr0011s0310.1 | acetylglucosaminyltransferase, putative | HC |
scaffold0011:238879-238562 | 20130731
Length = 105
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 5 MKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRTHRFSHG----AWCVGTLDAGADPC 60
M+ K SNAPFARKF ++ PV +KID E LGR + G W +
Sbjct: 8 MEQPSKRTPSNAPFARKFVRNVPVFNKIDAELLGRN---ADGCMPNMWFSQANSSVTKQH 64
Query: 61 SVRCNDTVFSPGPGAERL 78
S N T GPGAERL
Sbjct: 65 SAVRNITELRLGPGAERL 82
>Medtr4g008010.1 | core-2/I-branching enzyme | HC |
chr4:1352266-1355362 | 20130731
Length = 411
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 3 LTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEALGRT-HRFSHGAWCVGT-LDAGADPC 60
L M ++ M+++ A FAR F + D VL+KID L RT + F G WC + L+
Sbjct: 311 LDMSHYDTMMETGAVFARPFGEGDLVLEKIDDLVLNRTLNGFVQGEWCSSSNLEINKTTN 370
Query: 61 SVRCNDTVFSPGPGAERLHGLL-QVLLSEEFQSKQC 95
V N V PG +L LL +++ S ++ QC
Sbjct: 371 LVSGNIDVVKPGMFGIKLRTLLGEIVNSGRYRDCQC 406